data_1SUI
#
_model_server_result.job_id            l-shNyQv0B0eAlSCmwyfyg 
_model_server_result.datetime_utc      '2024-11-29 14:05:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1sui 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":303}' 
#
_entry.id    1SUI 
#
_exptl.entry_id    1SUI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              384.411 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            S-ADENOSYL-L-HOMOCYSTEINE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1SUI 
_cell.length_a            60.854 
_cell.length_b            136.486 
_cell.length_c            332.778 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1SUI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
? dimeric 2 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,G,J,K,N,P 1 1 
B,H,I,O 2 1,2 
D,L,M,Q 3 1,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
3 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 166.389 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 I N N 
? 3 K N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 163 A ASP 163 1_555 E CA CA . A CA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.895 ? 
metalc ? metalc2 A OD1 ASP 163 A ASP 163 1_555 E CA CA . A CA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.74 ? 
metalc ? metalc3 A OD2 ASP 189 A ASP 189 1_555 E CA CA . A CA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? 
metalc ? metalc4 A OD1 ASN 190 A ASN 190 1_555 E CA CA . A CA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? 
metalc ? metalc5 A ND2 ASN 190 A ASN 190 1_555 E CA CA . A CA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.221 ? 
metalc ? metalc6 B OD1 ASP 163 B ASP 163 1_555 H CA CA . B CA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? 
metalc ? metalc7 B OD2 ASP 163 B ASP 163 1_555 H CA CA . B CA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? 
metalc ? metalc8 B OD2 ASP 189 B ASP 189 1_555 H CA CA . B CA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.228 ? 
metalc ? metalc9 B OD1 ASN 190 B ASN 190 1_555 H CA CA . B CA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? 
metalc ? metalc10 H CA CA . B CA 306 1_555 O O HOH . B HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? 
metalc ? metalc11 C OD1 ASP 163 C ASP 163 1_555 J CA CA . C CA 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.87 ? 
metalc ? metalc12 C OD2 ASP 163 C ASP 163 1_555 J CA CA . C CA 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? 
metalc ? metalc13 C OD1 ASP 189 C ASP 189 1_555 J CA CA . C CA 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.218 ? 
metalc ? metalc14 C OD1 ASN 190 C ASN 190 1_555 J CA CA . C CA 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? 
metalc ? metalc15 C ND2 ASN 190 C ASN 190 1_555 J CA CA . C CA 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.191 ? 
metalc ? metalc16 D OD1 ASP 163 D ASP 163 1_555 L CA CA . D CA 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.324 ? 
metalc ? metalc17 D OD2 ASP 163 D ASP 163 1_555 L CA CA . D CA 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.904 ? 
metalc ? metalc18 D OD2 ASP 189 D ASP 189 1_555 L CA CA . D CA 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc19 D OD1 ASN 190 D ASN 190 1_555 L CA CA . D CA 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.267 ? 
metalc ? metalc20 D ND2 ASN 190 D ASN 190 1_555 L CA CA . D CA 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.327 ? 
metalc ? metalc21 M OXT SAH . D SAH 304 1_555 L CA CA . D CA 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.324 ? 
#
_chem_comp.formula           'C14 H20 N6 O5 S' 
_chem_comp.formula_weight    384.411 
_chem_comp.id                SAH 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              S-ADENOSYL-L-HOMOCYSTEINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA SAH sing 386 n n 
N HN1 SAH sing 387 n n 
N HN2 SAH sing 388 n n 
CA CB SAH sing 389 n n 
CA C SAH sing 390 n n 
CA HA SAH sing 391 n n 
CB CG SAH sing 392 n n 
CB HB1 SAH sing 393 n n 
CB HB2 SAH sing 394 n n 
CG SD SAH sing 395 n n 
CG HG1 SAH sing 396 n n 
CG HG2 SAH sing 397 n n 
SD C5' SAH sing 398 n n 
C O SAH doub 399 n n 
C OXT SAH sing 400 n n 
OXT HXT SAH sing 401 n n 
C5' C4' SAH sing 402 n n 
C5' "H5'1" SAH sing 403 n n 
C5' "H5'2" SAH sing 404 n n 
C4' O4' SAH sing 405 n n 
C4' C3' SAH sing 406 n n 
C4' H4' SAH sing 407 n n 
O4' C1' SAH sing 408 n n 
C3' O3' SAH sing 409 n n 
C3' C2' SAH sing 410 n n 
C3' H3' SAH sing 411 n n 
O3' HO3' SAH sing 412 n n 
C2' O2' SAH sing 413 n n 
C2' C1' SAH sing 414 n n 
C2' H2' SAH sing 415 n n 
O2' HO2' SAH sing 416 n n 
C1' N9 SAH sing 417 n n 
C1' H1' SAH sing 418 n n 
N9 C8 SAH sing 419 n y 
N9 C4 SAH sing 420 n y 
C8 N7 SAH doub 421 n y 
C8 H8 SAH sing 422 n n 
N7 C5 SAH sing 423 n y 
C5 C6 SAH sing 424 n y 
C5 C4 SAH doub 425 n y 
C6 N6 SAH sing 426 n n 
C6 N1 SAH doub 427 n y 
N6 HN61 SAH sing 428 n n 
N6 HN62 SAH sing 429 n n 
N1 C2 SAH sing 430 n y 
C2 N3 SAH doub 431 n y 
C2 H2 SAH sing 432 n n 
N3 C4 SAH sing 433 n y 
#
_atom_sites.entry_id                     1SUI 
_atom_sites.fract_transf_matrix[1][1]    0.016433 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007327 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003005 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 CA A 1 305 305 CA CA . 
F 3 SAH A 1 301 301 SAH SAH . 
G 4 FRE A 1 306 305 FRE FRE . 
H 2 CA B 1 306 306 CA CA . 
I 3 SAH B 1 302 302 SAH SAH . 
J 2 CA C 1 307 307 CA CA . 
K 3 SAH C 1 303 303 SAH SAH . 
L 2 CA D 1 308 308 CA CA . 
M 3 SAH D 1 304 304 SAH SAH . 
N 5 HOH A 1 307 4 HOH HOH . 
N 5 HOH A 2 308 9 HOH HOH . 
N 5 HOH A 3 309 10 HOH HOH . 
N 5 HOH A 4 310 13 HOH HOH . 
N 5 HOH A 5 311 14 HOH HOH . 
N 5 HOH A 6 312 16 HOH HOH . 
N 5 HOH A 7 313 29 HOH HOH . 
N 5 HOH A 8 314 33 HOH HOH . 
N 5 HOH A 9 315 35 HOH HOH . 
N 5 HOH A 10 316 36 HOH HOH . 
N 5 HOH A 11 317 37 HOH HOH . 
N 5 HOH A 12 318 38 HOH HOH . 
N 5 HOH A 13 319 42 HOH HOH . 
N 5 HOH A 14 320 45 HOH HOH . 
N 5 HOH A 15 321 48 HOH HOH . 
N 5 HOH A 16 322 55 HOH HOH . 
N 5 HOH A 17 323 57 HOH HOH . 
N 5 HOH A 18 324 60 HOH HOH . 
N 5 HOH A 19 325 61 HOH HOH . 
O 5 HOH B 1 307 1 HOH HOH . 
O 5 HOH B 2 308 3 HOH HOH . 
O 5 HOH B 3 309 5 HOH HOH . 
O 5 HOH B 4 310 6 HOH HOH . 
O 5 HOH B 5 311 7 HOH HOH . 
O 5 HOH B 6 312 12 HOH HOH . 
O 5 HOH B 7 313 17 HOH HOH . 
O 5 HOH B 8 314 18 HOH HOH . 
O 5 HOH B 9 315 21 HOH HOH . 
O 5 HOH B 10 316 22 HOH HOH . 
O 5 HOH B 11 317 24 HOH HOH . 
O 5 HOH B 12 318 26 HOH HOH . 
O 5 HOH B 13 319 27 HOH HOH . 
O 5 HOH B 14 320 28 HOH HOH . 
O 5 HOH B 15 321 30 HOH HOH . 
O 5 HOH B 16 322 32 HOH HOH . 
O 5 HOH B 17 323 34 HOH HOH . 
O 5 HOH B 18 324 39 HOH HOH . 
O 5 HOH B 19 325 40 HOH HOH . 
O 5 HOH B 20 326 41 HOH HOH . 
O 5 HOH B 21 327 43 HOH HOH . 
O 5 HOH B 22 328 44 HOH HOH . 
O 5 HOH B 23 329 46 HOH HOH . 
O 5 HOH B 24 330 49 HOH HOH . 
O 5 HOH B 25 331 52 HOH HOH . 
O 5 HOH B 26 332 53 HOH HOH . 
O 5 HOH B 27 333 54 HOH HOH . 
O 5 HOH B 28 334 56 HOH HOH . 
O 5 HOH B 29 335 58 HOH HOH . 
O 5 HOH B 30 336 64 HOH HOH . 
O 5 HOH B 31 337 66 HOH HOH . 
P 5 HOH C 1 308 2 HOH HOH . 
P 5 HOH C 2 309 11 HOH HOH . 
P 5 HOH C 3 310 15 HOH HOH . 
P 5 HOH C 4 311 20 HOH HOH . 
P 5 HOH C 5 312 25 HOH HOH . 
P 5 HOH C 6 313 47 HOH HOH . 
P 5 HOH C 7 314 50 HOH HOH . 
P 5 HOH C 8 315 62 HOH HOH . 
P 5 HOH C 9 316 63 HOH HOH . 
P 5 HOH C 10 317 65 HOH HOH . 
P 5 HOH C 11 318 67 HOH HOH . 
Q 5 HOH D 1 309 8 HOH HOH . 
Q 5 HOH D 2 310 23 HOH HOH . 
Q 5 HOH D 3 311 31 HOH HOH . 
Q 5 HOH D 4 312 51 HOH HOH . 
Q 5 HOH D 5 313 59 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N SAH . . . K 3 4.108 42.715 44.56 1 169.79 ? N SAH 303 C 1 
HETATM 2 C CA SAH . . . K 3 4.352 41.76 45.706 1 169.59 ? CA SAH 303 C 1 
HETATM 3 C CB SAH . . . K 3 4.766 42.486 46.972 1 171.06 ? CB SAH 303 C 1 
HETATM 4 C CG SAH . . . K 3 5.09 41.826 48.329 1 173.5 ? CG SAH 303 C 1 
HETATM 5 S SD SAH . . . K 3 3.651 41.805 49.471 1 175.88 ? SD SAH 303 C 1 
HETATM 6 C C SAH . . . K 3 3.012 40.972 45.863 1 168.72 ? C SAH 303 C 1 
HETATM 7 O O SAH . . . K 3 3.076 39.705 45.806 1 167.84 ? O SAH 303 C 1 
HETATM 8 O OXT SAH . . . K 3 1.951 41.632 46.03 1 168.27 ? OXT SAH 303 C 1 
HETATM 9 C C5' SAH . . . K 3 4.443 41.279 50.99 1 177.45 ? C5' SAH 303 C 1 
HETATM 10 C C4' SAH . . . K 3 3.523 41.199 52.185 1 179.23 ? C4' SAH 303 C 1 
HETATM 11 O O4' SAH . . . K 3 2.965 39.891 52.449 1 180.05 ? O4' SAH 303 C 1 
HETATM 12 C C3' SAH . . . K 3 4.078 41.576 53.57 1 179.66 ? C3' SAH 303 C 1 
HETATM 13 O O3' SAH . . . K 3 4.396 42.941 53.529 1 178.87 ? O3' SAH 303 C 1 
HETATM 14 C C2' SAH . . . K 3 2.855 41.239 54.486 1 180.27 ? C2' SAH 303 C 1 
HETATM 15 O O2' SAH . . . K 3 2.116 42.205 55.126 1 180.55 ? O2' SAH 303 C 1 
HETATM 16 C C1' SAH . . . K 3 2.141 40.16 53.652 1 180.52 ? C1' SAH 303 C 1 
HETATM 17 N N9 SAH . . . K 3 2.001 38.815 54.266 1 181.05 ? N9 SAH 303 C 1 
HETATM 18 C C8 SAH . . . K 3 2.56 38.482 55.492 1 181.28 ? C8 SAH 303 C 1 
HETATM 19 N N7 SAH . . . K 3 2.299 37.282 55.823 1 181.27 ? N7 SAH 303 C 1 
HETATM 20 C C5 SAH . . . K 3 1.536 36.776 54.787 1 181.07 ? C5 SAH 303 C 1 
HETATM 21 C C6 SAH . . . K 3 0.937 35.453 54.616 1 180.74 ? C6 SAH 303 C 1 
HETATM 22 N N6 SAH . . . K 3 1.087 34.509 55.524 1 180.31 ? N6 SAH 303 C 1 
HETATM 23 N N1 SAH . . . K 3 0.254 35.314 53.477 1 180.73 ? N1 SAH 303 C 1 
HETATM 24 C C2 SAH . . . K 3 0.092 36.284 52.535 1 181.17 ? C2 SAH 303 C 1 
HETATM 25 N N3 SAH . . . K 3 0.614 37.508 52.648 1 181.13 ? N3 SAH 303 C 1 
HETATM 26 C C4 SAH . . . K 3 1.314 37.69 53.792 1 181.17 ? C4 SAH 303 C 1 
#
_model_server_stats.io_time_ms              72 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           335 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           26 
#