data_1SUS # _model_server_result.job_id CBmDdrGy9Ll6eJ1Ype6qEA _model_server_result.datetime_utc '2025-03-05 19:36:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1sus # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":302}' # _entry.id 1SUS # _exptl.entry_id 1SUS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 384.411 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-ADENOSYL-L-HOMOCYSTEINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1SUS _cell.length_a 60.854 _cell.length_b 136.486 _cell.length_c 332.778 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SUS _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 ? dimeric 2 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,J,K,N,P 1 1 B,H,I,O 2 1,2 D,L,M,Q 3 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 166.389 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 I N N ? 3 K N N ? 3 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 163 A ASP 163 1_555 E CA CA . A CA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.927 ? metalc ? metalc2 A OD2 ASP 163 A ASP 163 1_555 E CA CA . A CA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc3 A OD2 ASP 189 A ASP 189 1_555 E CA CA . A CA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc4 A OD1 ASN 190 A ASN 190 1_555 E CA CA . A CA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc5 B OD1 ASP 163 B ASP 163 1_555 H CA CA . B CA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? metalc ? metalc6 B OD1 ASN 190 B ASN 190 1_555 H CA CA . B CA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.876 ? metalc ? metalc7 H CA CA . B CA 306 1_555 O O HOH . B HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc8 C OD1 ASP 163 C ASP 163 1_555 J CA CA . C CA 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? metalc ? metalc9 C OD2 ASP 163 C ASP 163 1_555 J CA CA . C CA 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.611 ? metalc ? metalc10 C OD2 ASP 189 C ASP 189 1_555 J CA CA . C CA 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc11 C OD1 ASN 190 C ASN 190 1_555 J CA CA . C CA 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? metalc ? metalc12 D OD1 ASP 163 D ASP 163 1_555 L CA CA . D CA 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.917 ? metalc ? metalc13 D OD2 ASP 163 D ASP 163 1_555 L CA CA . D CA 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.731 ? metalc ? metalc14 D OD2 ASP 189 D ASP 189 1_555 L CA CA . D CA 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? # _chem_comp.formula 'C14 H20 N6 O5 S' _chem_comp.formula_weight 384.411 _chem_comp.id SAH _chem_comp.mon_nstd_flag n _chem_comp.name S-ADENOSYL-L-HOMOCYSTEINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA SAH sing 277 n n N HN1 SAH sing 278 n n N HN2 SAH sing 279 n n CA CB SAH sing 280 n n CA C SAH sing 281 n n CA HA SAH sing 282 n n CB CG SAH sing 283 n n CB HB1 SAH sing 284 n n CB HB2 SAH sing 285 n n CG SD SAH sing 286 n n CG HG1 SAH sing 287 n n CG HG2 SAH sing 288 n n SD C5' SAH sing 289 n n C O SAH doub 290 n n C OXT SAH sing 291 n n OXT HXT SAH sing 292 n n C5' C4' SAH sing 293 n n C5' "H5'1" SAH sing 294 n n C5' "H5'2" SAH sing 295 n n C4' O4' SAH sing 296 n n C4' C3' SAH sing 297 n n C4' H4' SAH sing 298 n n O4' C1' SAH sing 299 n n C3' O3' SAH sing 300 n n C3' C2' SAH sing 301 n n C3' H3' SAH sing 302 n n O3' HO3' SAH sing 303 n n C2' O2' SAH sing 304 n n C2' C1' SAH sing 305 n n C2' H2' SAH sing 306 n n O2' HO2' SAH sing 307 n n C1' N9 SAH sing 308 n n C1' H1' SAH sing 309 n n N9 C8 SAH sing 310 n y N9 C4 SAH sing 311 n y C8 N7 SAH doub 312 n y C8 H8 SAH sing 313 n n N7 C5 SAH sing 314 n y C5 C6 SAH sing 315 n y C5 C4 SAH doub 316 n y C6 N6 SAH sing 317 n n C6 N1 SAH doub 318 n y N6 HN61 SAH sing 319 n n N6 HN62 SAH sing 320 n n N1 C2 SAH sing 321 n y C2 N3 SAH doub 322 n y C2 H2 SAH sing 323 n n N3 C4 SAH sing 324 n y # _atom_sites.entry_id 1SUS _atom_sites.fract_transf_matrix[1][1] 0.016433 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007327 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003005 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CA A 1 305 305 CA CA . F 3 SAH A 1 301 301 SAH SAH . G 4 SPF A 1 401 401 SPF SPF . H 2 CA B 1 306 306 CA CA . I 3 SAH B 1 302 302 SAH SAH . J 2 CA C 1 307 307 CA CA . K 3 SAH C 1 303 303 SAH SAH . L 2 CA D 1 308 308 CA CA . M 3 SAH D 1 304 304 SAH SAH . N 5 HOH A 1 402 4 HOH HOH . N 5 HOH A 2 403 13 HOH HOH . N 5 HOH A 3 404 14 HOH HOH . N 5 HOH A 4 405 16 HOH HOH . N 5 HOH A 5 406 29 HOH HOH . N 5 HOH A 6 407 33 HOH HOH . N 5 HOH A 7 408 35 HOH HOH . N 5 HOH A 8 409 36 HOH HOH . N 5 HOH A 9 410 37 HOH HOH . N 5 HOH A 10 411 38 HOH HOH . N 5 HOH A 11 412 42 HOH HOH . N 5 HOH A 12 413 45 HOH HOH . N 5 HOH A 13 414 48 HOH HOH . N 5 HOH A 14 415 55 HOH HOH . N 5 HOH A 15 416 57 HOH HOH . N 5 HOH A 16 417 61 HOH HOH . O 5 HOH B 1 307 1 HOH HOH . O 5 HOH B 2 308 3 HOH HOH . O 5 HOH B 3 309 5 HOH HOH . O 5 HOH B 4 310 6 HOH HOH . O 5 HOH B 5 311 7 HOH HOH . O 5 HOH B 6 312 9 HOH HOH . O 5 HOH B 7 313 10 HOH HOH . O 5 HOH B 8 314 12 HOH HOH . O 5 HOH B 9 315 17 HOH HOH . O 5 HOH B 10 316 18 HOH HOH . O 5 HOH B 11 317 21 HOH HOH . O 5 HOH B 12 318 22 HOH HOH . O 5 HOH B 13 319 24 HOH HOH . O 5 HOH B 14 320 26 HOH HOH . O 5 HOH B 15 321 27 HOH HOH . O 5 HOH B 16 322 28 HOH HOH . O 5 HOH B 17 323 30 HOH HOH . O 5 HOH B 18 324 32 HOH HOH . O 5 HOH B 19 325 34 HOH HOH . O 5 HOH B 20 326 39 HOH HOH . O 5 HOH B 21 327 40 HOH HOH . O 5 HOH B 22 328 41 HOH HOH . O 5 HOH B 23 329 43 HOH HOH . O 5 HOH B 24 330 44 HOH HOH . O 5 HOH B 25 331 46 HOH HOH . O 5 HOH B 26 332 49 HOH HOH . O 5 HOH B 27 333 52 HOH HOH . O 5 HOH B 28 334 53 HOH HOH . O 5 HOH B 29 335 54 HOH HOH . O 5 HOH B 30 336 56 HOH HOH . O 5 HOH B 31 337 58 HOH HOH . O 5 HOH B 32 338 60 HOH HOH . O 5 HOH B 33 339 64 HOH HOH . O 5 HOH B 34 340 66 HOH HOH . P 5 HOH C 1 308 2 HOH HOH . P 5 HOH C 2 309 11 HOH HOH . P 5 HOH C 3 310 15 HOH HOH . P 5 HOH C 4 311 20 HOH HOH . P 5 HOH C 5 312 25 HOH HOH . P 5 HOH C 6 313 47 HOH HOH . P 5 HOH C 7 314 50 HOH HOH . P 5 HOH C 8 315 62 HOH HOH . P 5 HOH C 9 316 63 HOH HOH . P 5 HOH C 10 317 65 HOH HOH . P 5 HOH C 11 318 67 HOH HOH . Q 5 HOH D 1 309 8 HOH HOH . Q 5 HOH D 2 310 23 HOH HOH . Q 5 HOH D 3 311 31 HOH HOH . Q 5 HOH D 4 312 51 HOH HOH . Q 5 HOH D 5 313 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N SAH . . . I 3 13.865 13.814 -11.686 1 112.2 ? N SAH 302 B 1 HETATM 2 C CA SAH . . . I 3 13.631 12.539 -12.471 1 111.92 ? CA SAH 302 B 1 HETATM 3 C CB SAH . . . I 3 13.913 12.723 -13.953 1 113.74 ? CB SAH 302 B 1 HETATM 4 C CG SAH . . . I 3 13.787 11.64 -15.041 1 115.98 ? CG SAH 302 B 1 HETATM 5 S SD SAH . . . I 3 12.696 12.12 -16.453 1 118.27 ? SD SAH 302 B 1 HETATM 6 C C SAH . . . I 3 14.561 11.48 -11.799 1 110.75 ? C SAH 302 B 1 HETATM 7 O O SAH . . . I 3 14.033 10.716 -10.935 1 110.07 ? O SAH 302 B 1 HETATM 8 O OXT SAH . . . I 3 15.761 11.428 -12.166 1 109.98 ? OXT SAH 302 B 1 HETATM 9 C C5' SAH . . . I 3 13.988 12.351 -17.674 1 118.64 ? C5' SAH 302 B 1 HETATM 10 C C4' SAH . . . I 3 13.646 12.791 -19.081 1 119.12 ? C4' SAH 302 B 1 HETATM 11 O O4' SAH . . . I 3 14.396 12.021 -20.026 1 119.66 ? O4' SAH 302 B 1 HETATM 12 C C3' SAH . . . I 3 12.219 12.661 -19.656 1 119.63 ? C3' SAH 302 B 1 HETATM 13 O O3' SAH . . . I 3 11.421 13.65 -19.047 1 119.29 ? O3' SAH 302 B 1 HETATM 14 C C2' SAH . . . I 3 12.469 12.924 -21.177 1 120.25 ? C2' SAH 302 B 1 HETATM 15 O O2' SAH . . . I 3 12.006 14.05 -21.807 1 120.57 ? O2' SAH 302 B 1 HETATM 16 C C1' SAH . . . I 3 13.951 12.527 -21.321 1 120.57 ? C1' SAH 302 B 1 HETATM 17 N N9 SAH . . . I 3 14.285 11.373 -22.192 1 121.4 ? N9 SAH 302 B 1 HETATM 18 C C8 SAH . . . I 3 13.326 10.515 -22.713 1 122.16 ? C8 SAH 302 B 1 HETATM 19 N N7 SAH . . . I 3 13.85 9.602 -23.436 1 122.72 ? N7 SAH 302 B 1 HETATM 20 C C5 SAH . . . I 3 15.215 9.846 -23.407 1 122.45 ? C5 SAH 302 B 1 HETATM 21 C C6 SAH . . . I 3 16.314 9.129 -24.054 1 122.4 ? C6 SAH 302 B 1 HETATM 22 N N6 SAH . . . I 3 16.083 8.07 -24.809 1 122.8 ? N6 SAH 302 B 1 HETATM 23 N N1 SAH . . . I 3 17.526 9.648 -23.804 1 121.83 ? N1 SAH 302 B 1 HETATM 24 C C2 SAH . . . I 3 17.766 10.741 -23.026 1 121.62 ? C2 SAH 302 B 1 HETATM 25 N N3 SAH . . . I 3 16.791 11.43 -22.417 1 121.58 ? N3 SAH 302 B 1 HETATM 26 C C4 SAH . . . I 3 15.547 10.934 -22.645 1 121.91 ? C4 SAH 302 B 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 26 #