data_1SV2 # _model_server_result.job_id Dtd1MfS35PMbxfC2L2NIoA _model_server_result.datetime_utc '2024-12-04 22:00:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1sv2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1514}' # _entry.id 1SV2 # _exptl.entry_id 1SV2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1SV2 _cell.length_a 83.914 _cell.length_b 83.914 _cell.length_c 204.411 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SV2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,I 1 1,2 B,E,F,G,H,J 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 83.914 83.914 102.2055 3 'crystal symmetry operation' 7_645 y+1,x-1,-z 0 1 0 1 0 0 0 0 -1 83.914 -83.914 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 101 A CYS 101 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc2 A NE2 HIS 143 A HIS 143 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc3 A NE2 HIS 147 A HIS 147 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc4 C ZN ZN . A ZN 1001 1_555 I O HOH . A HOH 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc5 B SG CYS 101 B CYS 101 1_555 E ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc6 B NE2 HIS 143 B HIS 143 1_555 E ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc7 B NE2 HIS 147 B HIS 147 1_555 E ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc8 E ZN ZN . B ZN 1001 1_555 J O HOH . B HOH 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 100 n n C O2 FMT sing 101 n n C H FMT sing 102 n n O2 HO2 FMT sing 103 n n # _atom_sites.entry_id 1SV2 _atom_sites.fract_transf_matrix[1][1] 0.011917 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011917 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004892 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 1001 1001 ZN ZN2 . D 3 DTT A 1 513 513 DTT DTT . E 2 ZN B 1 1001 1001 ZN ZN2 . F 3 DTT B 1 1513 1513 DTT DTT . G 4 FMT B 1 1514 1001 FMT CBX . H 4 FMT B 1 2001 2001 FMT CBX . I 5 HOH A 1 1002 1 HOH HOH . I 5 HOH A 2 1003 4 HOH HOH . I 5 HOH A 3 1004 6 HOH HOH . I 5 HOH A 4 1005 8 HOH HOH . I 5 HOH A 5 1006 10 HOH HOH . I 5 HOH A 6 1007 12 HOH HOH . I 5 HOH A 7 1008 13 HOH HOH . I 5 HOH A 8 1009 15 HOH HOH . I 5 HOH A 9 1010 19 HOH HOH . I 5 HOH A 10 1011 21 HOH HOH . I 5 HOH A 11 1012 23 HOH HOH . I 5 HOH A 12 1013 27 HOH HOH . I 5 HOH A 13 1014 28 HOH HOH . I 5 HOH A 14 1015 29 HOH HOH . I 5 HOH A 15 1016 31 HOH HOH . I 5 HOH A 16 1017 32 HOH HOH . I 5 HOH A 17 1018 35 HOH HOH . I 5 HOH A 18 1019 39 HOH HOH . I 5 HOH A 19 1020 40 HOH HOH . I 5 HOH A 20 1021 41 HOH HOH . I 5 HOH A 21 1022 43 HOH HOH . I 5 HOH A 22 1023 46 HOH HOH . I 5 HOH A 23 1024 47 HOH HOH . I 5 HOH A 24 1025 48 HOH HOH . I 5 HOH A 25 1026 52 HOH HOH . J 5 HOH B 1 2002 2 HOH HOH . J 5 HOH B 2 2003 3 HOH HOH . J 5 HOH B 3 2004 5 HOH HOH . J 5 HOH B 4 2005 7 HOH HOH . J 5 HOH B 5 2006 9 HOH HOH . J 5 HOH B 6 2007 11 HOH HOH . J 5 HOH B 7 2008 14 HOH HOH . J 5 HOH B 8 2009 16 HOH HOH . J 5 HOH B 9 2010 17 HOH HOH . J 5 HOH B 10 2011 18 HOH HOH . J 5 HOH B 11 2012 20 HOH HOH . J 5 HOH B 12 2013 22 HOH HOH . J 5 HOH B 13 2014 24 HOH HOH . J 5 HOH B 14 2015 25 HOH HOH . J 5 HOH B 15 2016 26 HOH HOH . J 5 HOH B 16 2017 30 HOH HOH . J 5 HOH B 17 2018 33 HOH HOH . J 5 HOH B 18 2019 34 HOH HOH . J 5 HOH B 19 2020 36 HOH HOH . J 5 HOH B 20 2021 37 HOH HOH . J 5 HOH B 21 2022 38 HOH HOH . J 5 HOH B 22 2023 42 HOH HOH . J 5 HOH B 23 2024 44 HOH HOH . J 5 HOH B 24 2025 45 HOH HOH . J 5 HOH B 25 2026 49 HOH HOH . J 5 HOH B 26 2027 50 HOH HOH . J 5 HOH B 27 2028 51 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . G 4 93.525 37.906 23.43 1 34.21 ? C FMT 1514 B 1 HETATM 2 O O1 FMT . . . G 4 94.108 37.121 24.137 1 34.34 ? O1 FMT 1514 B 1 HETATM 3 O O2 FMT . . . G 4 92.249 37.867 23.135 1 33.17 ? O2 FMT 1514 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 3 #