data_1SV5 # _model_server_result.job_id '_G1VDTLOSEEPI1BuaQx4IA' _model_server_result.datetime_utc '2024-11-05 19:38:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1sv5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 1SV5 # _exptl.entry_id 1SV5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 435.277 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-({6-AMINO-5-BROMO-2-[(4-CYANOPHENYL)AMINO]PYRIMIDIN-4-YL}OXY)-3,5-DIMETHYLBENZONITRILE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.47 _cell.angle_gamma 90 _cell.entry_id 1SV5 _cell.length_a 222.51 _cell.length_b 67.74 _cell.length_c 103.29 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SV5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H15 Br N6 O' _chem_comp.formula_weight 435.277 _chem_comp.id 65B _chem_comp.mon_nstd_flag . _chem_comp.name 4-({6-AMINO-5-BROMO-2-[(4-CYANOPHENYL)AMINO]PYRIMIDIN-4-YL}OXY)-3,5-DIMETHYLBENZONITRILE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Etravine;Etravirine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O17 65B sing 1 n n C1 C2 65B sing 2 n y C1 C6 65B doub 3 n y O17 C13 65B sing 4 n n C2 C2' 65B sing 5 n n C2 C3 65B doub 6 n y C2' "H2'1" 65B sing 7 n n C2' "H2'2" 65B sing 8 n n C2' "H2'3" 65B sing 9 n n C3 C4 65B sing 10 n y C3 H3 65B sing 11 n n C4 C5 65B doub 12 n y C4 C4' 65B sing 13 n n C5 C6 65B sing 14 n y C5 H5 65B sing 15 n n C6 C6' 65B sing 16 n n C6' "H6'1" 65B sing 17 n n C6' "H6'2" 65B sing 18 n n C6' "H6'3" 65B sing 19 n n C13 N12 65B sing 20 n y C13 C14 65B doub 21 n y N12 C11 65B doub 22 n y C11 N5 65B sing 23 n n C11 N16 65B sing 24 n y N5 C21 65B sing 25 n n N5 HN5 65B sing 26 n n N16 C15 65B doub 27 n y C15 N18 65B sing 28 n n C15 C14 65B sing 29 n y N18 H181 65B sing 30 n n N18 H182 65B sing 31 n n C14 BR 65B sing 32 n n C21 C22 65B sing 33 n y C21 C26 65B doub 34 n y C22 C23 65B doub 35 n y C22 H22 65B sing 36 n n C23 C24 65B sing 37 n y C23 H23 65B sing 38 n n C24 C25 65B doub 39 n y C24 C27 65B sing 40 n n C25 C26 65B sing 41 n y C25 H25 65B sing 42 n n C26 H26 65B sing 43 n n C27 N27 65B trip 44 n n C4' N4' 65B trip 45 n n # _atom_sites.entry_id 1SV5 _atom_sites.fract_transf_matrix[1][1] 0.004494 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001414 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014762 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01015 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id 65B _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 600 _pdbx_nonpoly_scheme.auth_seq_num 600 _pdbx_nonpoly_scheme.pdb_mon_id 65B _pdbx_nonpoly_scheme.auth_mon_id 65B _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 65B . . . C 3 142.792 -23.495 70.42 1 63.19 ? C1 65B 600 A 1 HETATM 2 O O17 65B . . . C 3 142.931 -24.097 69.133 1 62.52 ? O17 65B 600 A 1 HETATM 3 C C2 65B . . . C 3 142.513 -22.048 70.545 1 58.24 ? C2 65B 600 A 1 HETATM 4 C C2' 65B . . . C 3 142.347 -21.111 69.333 1 63.17 ? C2' 65B 600 A 1 HETATM 5 C C3 65B . . . C 3 142.372 -21.457 71.841 1 64.61 ? C3 65B 600 A 1 HETATM 6 C C4 65B . . . C 3 142.507 -22.241 73.019 1 64.36 ? C4 65B 600 A 1 HETATM 7 C C5 65B . . . C 3 142.776 -23.638 72.927 1 63.3 ? C5 65B 600 A 1 HETATM 8 C C6 65B . . . C 3 142.931 -24.288 71.658 1 62.01 ? C6 65B 600 A 1 HETATM 9 C C6' 65B . . . C 3 143.23 -25.803 71.656 1 68.73 ? C6' 65B 600 A 1 HETATM 10 C C13 65B . . . C 3 141.705 -24.841 68.768 1 71.61 ? C13 65B 600 A 1 HETATM 11 N N12 65B . . . C 3 141.329 -25.977 69.466 1 80.17 ? N12 65B 600 A 1 HETATM 12 C C11 65B . . . C 3 140.161 -26.732 69.173 1 78.36 ? C11 65B 600 A 1 HETATM 13 N N5 65B . . . C 3 139.786 -27.862 69.875 1 79.87 ? N5 65B 600 A 1 HETATM 14 N N16 65B . . . C 3 139.368 -26.306 68.12 1 80.08 ? N16 65B 600 A 1 HETATM 15 C C15 65B . . . C 3 139.695 -25.18 67.388 1 76.78 ? C15 65B 600 A 1 HETATM 16 N N18 65B . . . C 3 138.887 -24.843 66.395 1 58.99 ? N18 65B 600 A 1 HETATM 17 C C14 65B . . . C 3 140.877 -24.423 67.71 1 75.71 ? C14 65B 600 A 1 HETATM 18 C C21 65B . . . C 3 140.556 -28.626 70.758 1 76.05 ? C21 65B 600 A 1 HETATM 19 C C22 65B . . . C 3 140.764 -28.368 72.243 1 75.21 ? C22 65B 600 A 1 HETATM 20 C C23 65B . . . C 3 141.598 -29.244 73.048 1 71.59 ? C23 65B 600 A 1 HETATM 21 C C24 65B . . . C 3 142.218 -30.375 72.378 1 77.37 ? C24 65B 600 A 1 HETATM 22 C C25 65B . . . C 3 142.015 -30.618 70.975 1 72.68 ? C25 65B 600 A 1 HETATM 23 C C26 65B . . . C 3 141.194 -29.755 70.182 1 76.63 ? C26 65B 600 A 1 HETATM 24 C C27 65B . . . C 3 143.06 -31.29 73.094 1 83.45 ? C27 65B 600 A 1 HETATM 25 N N27 65B . . . C 3 143.768 -32.046 73.642 1 84.53 ? N27 65B 600 A 1 HETATM 26 C C4' 65B . . . C 3 142.358 -21.619 74.296 1 66.04 ? C4' 65B 600 A 1 HETATM 27 N N4' 65B . . . C 3 142.208 -21.156 75.345 1 73.51 ? N4' 65B 600 A 1 HETATM 28 BR BR 65B . . . C 3 141.314 -22.94 66.79 1 108.66 ? BR 65B 600 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 28 #