data_1SVE # _model_server_result.job_id VpHGL0J-uoYfAMPaJQaeww _model_server_result.datetime_utc '2024-12-22 02:15:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1sve # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":351}' # _entry.id 1SVE # _exptl.entry_id 1SVE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 507.51 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(4R)-4-(2-FLUORO-6-HYDROXY-3-METHOXY-BENZOYL)-BENZOIC ACID (3R)-3-[(PYRIDINE-4-CARBONYL)AMINO]-AZEPAN-4-YL ESTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1SVE _cell.length_a 74.24 _cell.length_b 76.32 _cell.length_c 79.74 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SVE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 9 A GLY 9 1_555 A N SEP 10 A SEP 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C SEP 10 A SEP 10 1_555 A N GLU 11 A GLU 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 A C TRP 196 A TRP 196 1_555 A N TPO 197 A TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale4 A C TPO 197 A TPO 197 1_555 A N LEU 198 A LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale5 A C VAL 337 A VAL 337 1_555 A N SEP 338 A SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 A C SEP 338 A SEP 338 1_555 A N ILE 339 A ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? metalc ? metalc1 A O1P SEP 10 A SEP 10 1_555 C NA NA . A NA 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? # _chem_comp.formula 'C27 H26 F N3 O6' _chem_comp.formula_weight 507.51 _chem_comp.id I01 _chem_comp.mon_nstd_flag . _chem_comp.name '(4R)-4-(2-FLUORO-6-HYDROXY-3-METHOXY-BENZOYL)-BENZOIC ACID (3R)-3-[(PYRIDINE-4-CARBONYL)AMINO]-AZEPAN-4-YL ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F96 C76 I01 sing 152 n n C76 C75 I01 doub 153 n y C76 C71 I01 sing 154 n y C75 O95 I01 sing 155 n n C75 C74 I01 sing 156 n y O95 C98 I01 sing 157 n n C98 H981 I01 sing 158 n n C98 H982 I01 sing 159 n n C98 H983 I01 sing 160 n n C74 C73 I01 doub 161 n y C74 H74 I01 sing 162 n n C73 C72 I01 sing 163 n y C73 H73 I01 sing 164 n n C72 O92 I01 sing 165 n n C72 C71 I01 doub 166 n y O92 H92 I01 sing 167 n n C71 C61 I01 sing 168 n n C61 O62 I01 doub 169 n n C61 C54 I01 sing 170 n n C54 C55 I01 sing 171 n y C54 C53 I01 doub 172 n y C55 C56 I01 doub 173 n y C55 H55 I01 sing 174 n n C56 C51 I01 sing 175 n y C56 H56 I01 sing 176 n n C53 C52 I01 sing 177 n y C53 H53 I01 sing 178 n n C52 C51 I01 doub 179 n y C52 H52 I01 sing 180 n n C51 C42 I01 sing 181 n n C42 O43 I01 doub 182 n n C42 O41 I01 sing 183 n n O41 C37 I01 sing 184 n n C37 C36 I01 sing 185 n n C37 C31 I01 sing 186 n n C37 H37 I01 sing 187 n n C36 C35 I01 sing 188 n n C36 H361 I01 sing 189 n n C36 H362 I01 sing 190 n n C35 C34 I01 sing 191 n n C35 H351 I01 sing 192 n n C35 H352 I01 sing 193 n n C34 N33 I01 sing 194 n n C34 H341 I01 sing 195 n n C34 H342 I01 sing 196 n n N33 C32 I01 sing 197 n n N33 H33 I01 sing 198 n n C32 C31 I01 sing 199 n n C32 H321 I01 sing 200 n n C32 H322 I01 sing 201 n n C31 N23 I01 sing 202 n n C31 H31 I01 sing 203 n n N23 C21 I01 sing 204 n n N23 H23 I01 sing 205 n n C21 O22 I01 doub 206 n n C21 C14 I01 sing 207 n n C14 C13 I01 sing 208 n y C14 C15 I01 doub 209 n y C13 C12 I01 doub 210 n y C13 H13 I01 sing 211 n n C12 N11 I01 sing 212 n y C12 H12 I01 sing 213 n n N11 C16 I01 doub 214 n y C16 C15 I01 sing 215 n y C16 H16 I01 sing 216 n n C15 H15 I01 sing 217 n n # _atom_sites.entry_id 1SVE _atom_sites.fract_transf_matrix[1][1] 0.01347 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013103 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012541 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA A 1 900 900 NA NA . D 4 I01 A 1 351 351 I01 I01 . E 5 MG8 A 1 901 300 MG8 MG8 . F 6 HOH A 1 902 2 HOH HOH . F 6 HOH A 2 903 4 HOH HOH . F 6 HOH A 3 904 6 HOH HOH . F 6 HOH A 4 905 8 HOH HOH . F 6 HOH A 5 906 9 HOH HOH . F 6 HOH A 6 907 11 HOH HOH . F 6 HOH A 7 908 12 HOH HOH . F 6 HOH A 8 909 13 HOH HOH . F 6 HOH A 9 910 16 HOH HOH . F 6 HOH A 10 911 22 HOH HOH . F 6 HOH A 11 912 27 HOH HOH . F 6 HOH A 12 913 30 HOH HOH . F 6 HOH A 13 914 32 HOH HOH . F 6 HOH A 14 915 34 HOH HOH . F 6 HOH A 15 916 36 HOH HOH . F 6 HOH A 16 917 37 HOH HOH . F 6 HOH A 17 918 39 HOH HOH . F 6 HOH A 18 919 40 HOH HOH . F 6 HOH A 19 920 48 HOH HOH . F 6 HOH A 20 921 50 HOH HOH . F 6 HOH A 21 922 53 HOH HOH . F 6 HOH A 22 923 54 HOH HOH . F 6 HOH A 23 924 55 HOH HOH . F 6 HOH A 24 925 57 HOH HOH . F 6 HOH A 25 926 59 HOH HOH . F 6 HOH A 26 927 101 HOH HOH . F 6 HOH A 27 928 108 HOH HOH . F 6 HOH A 28 929 109 HOH HOH . F 6 HOH A 29 930 113 HOH HOH . F 6 HOH A 30 931 115 HOH HOH . F 6 HOH A 31 932 123 HOH HOH . F 6 HOH A 32 933 127 HOH HOH . F 6 HOH A 33 934 162 HOH HOH . F 6 HOH A 34 935 281 HOH HOH . F 6 HOH A 35 936 232 HOH HOH . F 6 HOH A 36 937 239 HOH HOH . F 6 HOH A 37 938 242 HOH HOH . F 6 HOH A 38 939 250 HOH HOH . F 6 HOH A 39 940 259 HOH HOH . F 6 HOH A 40 941 264 HOH HOH . F 6 HOH A 41 942 265 HOH HOH . F 6 HOH A 42 943 266 HOH HOH . F 6 HOH A 43 944 294 HOH HOH . F 6 HOH A 44 945 216 HOH HOH . F 6 HOH A 45 946 233 HOH HOH . F 6 HOH A 46 947 234 HOH HOH . F 6 HOH A 47 948 237 HOH HOH . F 6 HOH A 48 949 238 HOH HOH . F 6 HOH A 49 950 445 HOH HOH . F 6 HOH A 50 951 450 HOH HOH . F 6 HOH A 51 952 454 HOH HOH . F 6 HOH A 52 953 515 HOH HOH . F 6 HOH A 53 954 517 HOH HOH . F 6 HOH A 54 955 519 HOH HOH . F 6 HOH A 55 956 523 HOH HOH . F 6 HOH A 56 957 529 HOH HOH . F 6 HOH A 57 958 531 HOH HOH . F 6 HOH A 58 959 532 HOH HOH . F 6 HOH A 59 960 536 HOH HOH . F 6 HOH A 60 961 540 HOH HOH . F 6 HOH A 61 962 551 HOH HOH . F 6 HOH A 62 963 566 HOH HOH . F 6 HOH A 63 964 599 HOH HOH . F 6 HOH A 64 965 579 HOH HOH . F 6 HOH A 65 966 644 HOH HOH . F 6 HOH A 66 967 669 HOH HOH . F 6 HOH A 67 968 710 HOH HOH . F 6 HOH A 68 969 712 HOH HOH . F 6 HOH A 69 970 714 HOH HOH . F 6 HOH A 70 971 716 HOH HOH . F 6 HOH A 71 972 718 HOH HOH . F 6 HOH A 72 973 808 HOH HOH . F 6 HOH A 73 974 809 HOH HOH . F 6 HOH A 74 975 810 HOH HOH . F 6 HOH A 75 976 814 HOH HOH . F 6 HOH A 76 977 816 HOH HOH . F 6 HOH A 77 978 820 HOH HOH . F 6 HOH A 78 979 821 HOH HOH . F 6 HOH A 79 980 824 HOH HOH . F 6 HOH A 80 981 826 HOH HOH . F 6 HOH A 81 982 828 HOH HOH . F 6 HOH A 82 983 829 HOH HOH . F 6 HOH A 83 984 830 HOH HOH . F 6 HOH A 84 985 831 HOH HOH . F 6 HOH A 85 986 832 HOH HOH . F 6 HOH A 86 987 834 HOH HOH . F 6 HOH A 87 988 836 HOH HOH . F 6 HOH A 88 989 838 HOH HOH . F 6 HOH A 89 990 839 HOH HOH . G 6 HOH B 1 25 1 HOH HOH . G 6 HOH B 2 26 5 HOH HOH . G 6 HOH B 3 27 14 HOH HOH . G 6 HOH B 4 28 19 HOH HOH . G 6 HOH B 5 29 116 HOH HOH . G 6 HOH B 6 30 120 HOH HOH . G 6 HOH B 7 31 439 HOH HOH . G 6 HOH B 8 32 658 HOH HOH . G 6 HOH B 9 33 811 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F96 I01 . . . D 4 16.964 11.935 -3.541 1 11.55 ? F96 I01 351 A 1 HETATM 2 C C76 I01 . . . D 4 15.957 11.634 -4.351 1 9.96 ? C76 I01 351 A 1 HETATM 3 C C75 I01 . . . D 4 16.274 10.966 -5.493 1 12.34 ? C75 I01 351 A 1 HETATM 4 O O95 I01 . . . D 4 17.614 10.645 -5.625 1 13.84 ? O95 I01 351 A 1 HETATM 5 C C98 I01 . . . D 4 18.087 10.285 -6.9 1 14.82 ? C98 I01 351 A 1 HETATM 6 C C74 I01 . . . D 4 15.223 10.64 -6.371 1 12.36 ? C74 I01 351 A 1 HETATM 7 C C73 I01 . . . D 4 13.92 11.027 -6.05 1 11.22 ? C73 I01 351 A 1 HETATM 8 C C72 I01 . . . D 4 13.615 11.75 -4.843 1 10.87 ? C72 I01 351 A 1 HETATM 9 O O92 I01 . . . D 4 12.404 12.129 -4.541 1 11.99 ? O92 I01 351 A 1 HETATM 10 C C71 I01 . . . D 4 14.7 12.048 -3.972 1 9.73 ? C71 I01 351 A 1 HETATM 11 C C61 I01 . . . D 4 14.574 12.789 -2.727 1 10.81 ? C61 I01 351 A 1 HETATM 12 O O62 I01 . . . D 4 15.244 13.838 -2.545 1 8.17 ? O62 I01 351 A 1 HETATM 13 C C54 I01 . . . D 4 13.756 12.376 -1.58 1 9.24 ? C54 I01 351 A 1 HETATM 14 C C55 I01 . . . D 4 13.45 11.013 -1.326 1 8.98 ? C55 I01 351 A 1 HETATM 15 C C56 I01 . . . D 4 12.705 10.688 -0.199 1 9.04 ? C56 I01 351 A 1 HETATM 16 C C53 I01 . . . D 4 13.322 13.369 -0.693 1 5.04 ? C53 I01 351 A 1 HETATM 17 C C52 I01 . . . D 4 12.59 13.041 0.419 1 7.6 ? C52 I01 351 A 1 HETATM 18 C C51 I01 . . . D 4 12.276 11.704 0.692 1 9.96 ? C51 I01 351 A 1 HETATM 19 C C42 I01 . . . D 4 11.517 11.404 1.911 1 10.57 ? C42 I01 351 A 1 HETATM 20 O O43 I01 . . . D 4 11.318 12.207 2.833 1 10.95 ? O43 I01 351 A 1 HETATM 21 O O41 I01 . . . D 4 11.048 10.153 2.021 1 10.49 ? O41 I01 351 A 1 HETATM 22 C C37 I01 . . . D 4 10.478 9.678 3.217 1 9.39 ? C37 I01 351 A 1 HETATM 23 C C36 I01 . . . D 4 11.591 9.358 4.239 1 8.49 ? C36 I01 351 A 1 HETATM 24 C C35 I01 . . . D 4 12.793 8.562 3.712 1 6.86 ? C35 I01 351 A 1 HETATM 25 C C34 I01 . . . D 4 12.51 7.073 3.752 1 7.05 ? C34 I01 351 A 1 HETATM 26 N N33 I01 . . . D 4 11.412 6.772 2.821 1 8.45 ? N33 I01 351 A 1 HETATM 27 C C32 I01 . . . D 4 10.072 7.111 3.347 1 9.89 ? C32 I01 351 A 1 HETATM 28 C C31 I01 . . . D 4 9.581 8.488 2.865 1 9.41 ? C31 I01 351 A 1 HETATM 29 N N23 I01 . . . D 4 8.233 8.749 3.376 1 10.47 ? N23 I01 351 A 1 HETATM 30 C C21 I01 . . . D 4 7.117 8.948 2.561 1 10.88 ? C21 I01 351 A 1 HETATM 31 O O22 I01 . . . D 4 7.263 9.025 1.329 1 14.02 ? O22 I01 351 A 1 HETATM 32 C C14 I01 . . . D 4 5.787 9.06 3.183 1 10.35 ? C14 I01 351 A 1 HETATM 33 C C13 I01 . . . D 4 4.66 9.121 2.352 1 9.64 ? C13 I01 351 A 1 HETATM 34 C C12 I01 . . . D 4 3.397 9.215 2.909 1 11.36 ? C12 I01 351 A 1 HETATM 35 N N11 I01 . . . D 4 3.244 9.248 4.295 1 10.23 ? N11 I01 351 A 1 HETATM 36 C C16 I01 . . . D 4 4.341 9.181 5.132 1 10.05 ? C16 I01 351 A 1 HETATM 37 C C15 I01 . . . D 4 5.604 9.086 4.588 1 10.04 ? C15 I01 351 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 37 #