data_1SVK
#
_model_server_result.job_id            YOeZYxOMaOUEYufj0fmJVA 
_model_server_result.datetime_utc      '2024-11-14 15:42:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1svk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":355}' 
#
_entry.id    1SVK 
#
_exptl.entry_id    1SVK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              443.201 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-DIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1SVK 
_cell.length_a            79.473 
_cell.length_b            79.473 
_cell.length_c            105.209 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1SVK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 46 A SER 47 1_555 B MG MG . A MG 356 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.049 ? 
metalc ? metalc2 A OG1 THR 180 A THR 181 1_555 B MG MG . A MG 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? 
metalc ? metalc3 D O2B GDP . A GDP 355 1_555 B MG MG . A MG 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
metalc ? metalc4 D O3B GDP . A GDP 355 1_555 C AL ALF . A ALF 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? 
metalc ? metalc5 D O2B GDP . A GDP 355 1_555 C AL ALF . A ALF 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.708 ? 
metalc ? metalc6 B MG MG . A MG 356 1_555 C F3 ALF . A ALF 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
metalc ? metalc7 B MG MG . A MG 356 1_555 C AL ALF . A ALF 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.488 ? 
metalc ? metalc8 B MG MG . A MG 356 1_555 E O HOH . A HOH 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
metalc ? metalc9 B MG MG . A MG 356 1_555 E O HOH . A HOH 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? 
metalc ? metalc10 C AL ALF . A ALF 357 1_555 E O HOH . A HOH 736 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
#
_chem_comp.formula           'C10 H15 N5 O11 P2' 
_chem_comp.formula_weight    443.201 
_chem_comp.id                GDP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-DIPHOSPHATE" 
_chem_comp.type              'rna linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PB O1B GDP doub 87 n n 
PB O2B GDP sing 88 n n 
PB O3B GDP sing 89 n n 
PB O3A GDP sing 90 n n 
O2B HOB2 GDP sing 91 n n 
O3B HOB3 GDP sing 92 n n 
O3A PA GDP sing 93 n n 
PA O1A GDP doub 94 n n 
PA O2A GDP sing 95 n n 
PA O5' GDP sing 96 n n 
O2A HOA2 GDP sing 97 n n 
O5' C5' GDP sing 98 n n 
C5' C4' GDP sing 99 n n 
C5' H5' GDP sing 100 n n 
C5' "H5''" GDP sing 101 n n 
C4' O4' GDP sing 102 n n 
C4' C3' GDP sing 103 n n 
C4' H4' GDP sing 104 n n 
O4' C1' GDP sing 105 n n 
C3' O3' GDP sing 106 n n 
C3' C2' GDP sing 107 n n 
C3' H3' GDP sing 108 n n 
O3' HO3' GDP sing 109 n n 
C2' O2' GDP sing 110 n n 
C2' C1' GDP sing 111 n n 
C2' H2' GDP sing 112 n n 
O2' HO2' GDP sing 113 n n 
C1' N9 GDP sing 114 n n 
C1' H1' GDP sing 115 n n 
N9 C8 GDP sing 116 n y 
N9 C4 GDP sing 117 n y 
C8 N7 GDP doub 118 n y 
C8 H8 GDP sing 119 n n 
N7 C5 GDP sing 120 n y 
C5 C6 GDP sing 121 n n 
C5 C4 GDP doub 122 n y 
C6 O6 GDP doub 123 n n 
C6 N1 GDP sing 124 n n 
N1 C2 GDP sing 125 n n 
N1 HN1 GDP sing 126 n n 
C2 N2 GDP sing 127 n n 
C2 N3 GDP doub 128 n n 
N2 HN21 GDP sing 129 n n 
N2 HN22 GDP sing 130 n n 
N3 C4 GDP sing 131 n n 
#
_atom_sites.entry_id                     1SVK 
_atom_sites.fract_transf_matrix[1][1]    0.012583 
_atom_sites.fract_transf_matrix[1][2]    0.007265 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014529 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009505 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 356 356 MG MG . 
C 3 ALF A 1 357 357 ALF ALF . 
D 4 GDP A 1 355 355 GDP GDP . 
E 5 HOH A 1 358 358 HOH HOH . 
E 5 HOH A 2 359 359 HOH HOH . 
E 5 HOH A 3 400 400 HOH HOH . 
E 5 HOH A 4 401 401 HOH HOH . 
E 5 HOH A 5 402 402 HOH HOH . 
E 5 HOH A 6 403 403 HOH HOH . 
E 5 HOH A 7 404 404 HOH HOH . 
E 5 HOH A 8 405 405 HOH HOH . 
E 5 HOH A 9 406 406 HOH HOH . 
E 5 HOH A 10 407 407 HOH HOH . 
E 5 HOH A 11 408 408 HOH HOH . 
E 5 HOH A 12 409 409 HOH HOH . 
E 5 HOH A 13 410 410 HOH HOH . 
E 5 HOH A 14 411 411 HOH HOH . 
E 5 HOH A 15 412 412 HOH HOH . 
E 5 HOH A 16 413 413 HOH HOH . 
E 5 HOH A 17 414 414 HOH HOH . 
E 5 HOH A 18 415 415 HOH HOH . 
E 5 HOH A 19 416 416 HOH HOH . 
E 5 HOH A 20 417 417 HOH HOH . 
E 5 HOH A 21 418 418 HOH HOH . 
E 5 HOH A 22 419 419 HOH HOH . 
E 5 HOH A 23 420 420 HOH HOH . 
E 5 HOH A 24 421 421 HOH HOH . 
E 5 HOH A 25 422 422 HOH HOH . 
E 5 HOH A 26 423 423 HOH HOH . 
E 5 HOH A 27 424 424 HOH HOH . 
E 5 HOH A 28 425 425 HOH HOH . 
E 5 HOH A 29 426 426 HOH HOH . 
E 5 HOH A 30 427 427 HOH HOH . 
E 5 HOH A 31 428 428 HOH HOH . 
E 5 HOH A 32 429 429 HOH HOH . 
E 5 HOH A 33 430 430 HOH HOH . 
E 5 HOH A 34 431 431 HOH HOH . 
E 5 HOH A 35 432 432 HOH HOH . 
E 5 HOH A 36 433 433 HOH HOH . 
E 5 HOH A 37 434 434 HOH HOH . 
E 5 HOH A 38 435 435 HOH HOH . 
E 5 HOH A 39 436 436 HOH HOH . 
E 5 HOH A 40 437 437 HOH HOH . 
E 5 HOH A 41 438 438 HOH HOH . 
E 5 HOH A 42 439 439 HOH HOH . 
E 5 HOH A 43 440 440 HOH HOH . 
E 5 HOH A 44 441 441 HOH HOH . 
E 5 HOH A 45 442 442 HOH HOH . 
E 5 HOH A 46 443 443 HOH HOH . 
E 5 HOH A 47 444 444 HOH HOH . 
E 5 HOH A 48 445 445 HOH HOH . 
E 5 HOH A 49 446 446 HOH HOH . 
E 5 HOH A 50 447 447 HOH HOH . 
E 5 HOH A 51 448 448 HOH HOH . 
E 5 HOH A 52 449 449 HOH HOH . 
E 5 HOH A 53 450 450 HOH HOH . 
E 5 HOH A 54 451 451 HOH HOH . 
E 5 HOH A 55 452 452 HOH HOH . 
E 5 HOH A 56 453 453 HOH HOH . 
E 5 HOH A 57 454 454 HOH HOH . 
E 5 HOH A 58 455 455 HOH HOH . 
E 5 HOH A 59 456 456 HOH HOH . 
E 5 HOH A 60 457 457 HOH HOH . 
E 5 HOH A 61 458 458 HOH HOH . 
E 5 HOH A 62 459 459 HOH HOH . 
E 5 HOH A 63 460 460 HOH HOH . 
E 5 HOH A 64 461 461 HOH HOH . 
E 5 HOH A 65 462 462 HOH HOH . 
E 5 HOH A 66 463 463 HOH HOH . 
E 5 HOH A 67 464 464 HOH HOH . 
E 5 HOH A 68 465 465 HOH HOH . 
E 5 HOH A 69 466 466 HOH HOH . 
E 5 HOH A 70 467 467 HOH HOH . 
E 5 HOH A 71 468 468 HOH HOH . 
E 5 HOH A 72 469 469 HOH HOH . 
E 5 HOH A 73 470 470 HOH HOH . 
E 5 HOH A 74 471 471 HOH HOH . 
E 5 HOH A 75 472 472 HOH HOH . 
E 5 HOH A 76 473 473 HOH HOH . 
E 5 HOH A 77 474 474 HOH HOH . 
E 5 HOH A 78 475 475 HOH HOH . 
E 5 HOH A 79 476 476 HOH HOH . 
E 5 HOH A 80 477 477 HOH HOH . 
E 5 HOH A 81 478 478 HOH HOH . 
E 5 HOH A 82 479 479 HOH HOH . 
E 5 HOH A 83 480 480 HOH HOH . 
E 5 HOH A 84 481 481 HOH HOH . 
E 5 HOH A 85 482 482 HOH HOH . 
E 5 HOH A 86 483 483 HOH HOH . 
E 5 HOH A 87 484 484 HOH HOH . 
E 5 HOH A 88 485 485 HOH HOH . 
E 5 HOH A 89 486 486 HOH HOH . 
E 5 HOH A 90 487 487 HOH HOH . 
E 5 HOH A 91 488 488 HOH HOH . 
E 5 HOH A 92 489 489 HOH HOH . 
E 5 HOH A 93 491 491 HOH HOH . 
E 5 HOH A 94 492 492 HOH HOH . 
E 5 HOH A 95 493 493 HOH HOH . 
E 5 HOH A 96 494 494 HOH HOH . 
E 5 HOH A 97 495 495 HOH HOH . 
E 5 HOH A 98 496 496 HOH HOH . 
E 5 HOH A 99 497 497 HOH HOH . 
E 5 HOH A 100 498 498 HOH HOH . 
E 5 HOH A 101 499 499 HOH HOH . 
E 5 HOH A 102 500 500 HOH HOH . 
E 5 HOH A 103 501 501 HOH HOH . 
E 5 HOH A 104 502 502 HOH HOH . 
E 5 HOH A 105 503 503 HOH HOH . 
E 5 HOH A 106 504 504 HOH HOH . 
E 5 HOH A 107 505 505 HOH HOH . 
E 5 HOH A 108 506 506 HOH HOH . 
E 5 HOH A 109 507 507 HOH HOH . 
E 5 HOH A 110 508 508 HOH HOH . 
E 5 HOH A 111 509 509 HOH HOH . 
E 5 HOH A 112 510 510 HOH HOH . 
E 5 HOH A 113 512 512 HOH HOH . 
E 5 HOH A 114 513 513 HOH HOH . 
E 5 HOH A 115 514 514 HOH HOH . 
E 5 HOH A 116 515 515 HOH HOH . 
E 5 HOH A 117 516 516 HOH HOH . 
E 5 HOH A 118 517 517 HOH HOH . 
E 5 HOH A 119 518 518 HOH HOH . 
E 5 HOH A 120 519 519 HOH HOH . 
E 5 HOH A 121 520 520 HOH HOH . 
E 5 HOH A 122 521 521 HOH HOH . 
E 5 HOH A 123 522 522 HOH HOH . 
E 5 HOH A 124 523 523 HOH HOH . 
E 5 HOH A 125 524 524 HOH HOH . 
E 5 HOH A 126 525 525 HOH HOH . 
E 5 HOH A 127 526 526 HOH HOH . 
E 5 HOH A 128 527 527 HOH HOH . 
E 5 HOH A 129 528 528 HOH HOH . 
E 5 HOH A 130 529 529 HOH HOH . 
E 5 HOH A 131 530 530 HOH HOH . 
E 5 HOH A 132 531 531 HOH HOH . 
E 5 HOH A 133 532 532 HOH HOH . 
E 5 HOH A 134 533 533 HOH HOH . 
E 5 HOH A 135 534 534 HOH HOH . 
E 5 HOH A 136 535 535 HOH HOH . 
E 5 HOH A 137 536 536 HOH HOH . 
E 5 HOH A 138 537 537 HOH HOH . 
E 5 HOH A 139 538 538 HOH HOH . 
E 5 HOH A 140 539 539 HOH HOH . 
E 5 HOH A 141 540 540 HOH HOH . 
E 5 HOH A 142 541 541 HOH HOH . 
E 5 HOH A 143 542 542 HOH HOH . 
E 5 HOH A 144 543 543 HOH HOH . 
E 5 HOH A 145 544 544 HOH HOH . 
E 5 HOH A 146 545 545 HOH HOH . 
E 5 HOH A 147 546 546 HOH HOH . 
E 5 HOH A 148 547 547 HOH HOH . 
E 5 HOH A 149 548 548 HOH HOH . 
E 5 HOH A 150 549 549 HOH HOH . 
E 5 HOH A 151 550 550 HOH HOH . 
E 5 HOH A 152 551 551 HOH HOH . 
E 5 HOH A 153 552 552 HOH HOH . 
E 5 HOH A 154 553 553 HOH HOH . 
E 5 HOH A 155 554 554 HOH HOH . 
E 5 HOH A 156 555 555 HOH HOH . 
E 5 HOH A 157 556 556 HOH HOH . 
E 5 HOH A 158 557 557 HOH HOH . 
E 5 HOH A 159 558 558 HOH HOH . 
E 5 HOH A 160 559 559 HOH HOH . 
E 5 HOH A 161 560 560 HOH HOH . 
E 5 HOH A 162 561 561 HOH HOH . 
E 5 HOH A 163 562 562 HOH HOH . 
E 5 HOH A 164 563 563 HOH HOH . 
E 5 HOH A 165 564 564 HOH HOH . 
E 5 HOH A 166 565 565 HOH HOH . 
E 5 HOH A 167 566 566 HOH HOH . 
E 5 HOH A 168 567 567 HOH HOH . 
E 5 HOH A 169 568 568 HOH HOH . 
E 5 HOH A 170 569 569 HOH HOH . 
E 5 HOH A 171 570 570 HOH HOH . 
E 5 HOH A 172 571 571 HOH HOH . 
E 5 HOH A 173 572 572 HOH HOH . 
E 5 HOH A 174 573 573 HOH HOH . 
E 5 HOH A 175 574 574 HOH HOH . 
E 5 HOH A 176 575 575 HOH HOH . 
E 5 HOH A 177 576 576 HOH HOH . 
E 5 HOH A 178 578 578 HOH HOH . 
E 5 HOH A 179 579 579 HOH HOH . 
E 5 HOH A 180 580 580 HOH HOH . 
E 5 HOH A 181 581 581 HOH HOH . 
E 5 HOH A 182 582 582 HOH HOH . 
E 5 HOH A 183 583 583 HOH HOH . 
E 5 HOH A 184 584 584 HOH HOH . 
E 5 HOH A 185 585 585 HOH HOH . 
E 5 HOH A 186 586 586 HOH HOH . 
E 5 HOH A 187 587 587 HOH HOH . 
E 5 HOH A 188 588 588 HOH HOH . 
E 5 HOH A 189 589 589 HOH HOH . 
E 5 HOH A 190 590 590 HOH HOH . 
E 5 HOH A 191 591 591 HOH HOH . 
E 5 HOH A 192 592 592 HOH HOH . 
E 5 HOH A 193 593 593 HOH HOH . 
E 5 HOH A 194 594 594 HOH HOH . 
E 5 HOH A 195 595 595 HOH HOH . 
E 5 HOH A 196 596 596 HOH HOH . 
E 5 HOH A 197 597 597 HOH HOH . 
E 5 HOH A 198 598 598 HOH HOH . 
E 5 HOH A 199 599 599 HOH HOH . 
E 5 HOH A 200 600 600 HOH HOH . 
E 5 HOH A 201 601 601 HOH HOH . 
E 5 HOH A 202 602 602 HOH HOH . 
E 5 HOH A 203 603 603 HOH HOH . 
E 5 HOH A 204 604 604 HOH HOH . 
E 5 HOH A 205 605 605 HOH HOH . 
E 5 HOH A 206 606 606 HOH HOH . 
E 5 HOH A 207 607 607 HOH HOH . 
E 5 HOH A 208 608 608 HOH HOH . 
E 5 HOH A 209 609 609 HOH HOH . 
E 5 HOH A 210 610 610 HOH HOH . 
E 5 HOH A 211 611 611 HOH HOH . 
E 5 HOH A 212 612 612 HOH HOH . 
E 5 HOH A 213 613 613 HOH HOH . 
E 5 HOH A 214 614 614 HOH HOH . 
E 5 HOH A 215 615 615 HOH HOH . 
E 5 HOH A 216 616 616 HOH HOH . 
E 5 HOH A 217 617 617 HOH HOH . 
E 5 HOH A 218 618 618 HOH HOH . 
E 5 HOH A 219 619 619 HOH HOH . 
E 5 HOH A 220 620 620 HOH HOH . 
E 5 HOH A 221 621 621 HOH HOH . 
E 5 HOH A 222 622 622 HOH HOH . 
E 5 HOH A 223 623 623 HOH HOH . 
E 5 HOH A 224 624 624 HOH HOH . 
E 5 HOH A 225 625 625 HOH HOH . 
E 5 HOH A 226 626 626 HOH HOH . 
E 5 HOH A 227 627 627 HOH HOH . 
E 5 HOH A 228 628 628 HOH HOH . 
E 5 HOH A 229 629 629 HOH HOH . 
E 5 HOH A 230 630 630 HOH HOH . 
E 5 HOH A 231 631 631 HOH HOH . 
E 5 HOH A 232 632 632 HOH HOH . 
E 5 HOH A 233 633 633 HOH HOH . 
E 5 HOH A 234 634 634 HOH HOH . 
E 5 HOH A 235 635 635 HOH HOH . 
E 5 HOH A 236 636 636 HOH HOH . 
E 5 HOH A 237 637 637 HOH HOH . 
E 5 HOH A 238 638 638 HOH HOH . 
E 5 HOH A 239 639 639 HOH HOH . 
E 5 HOH A 240 640 640 HOH HOH . 
E 5 HOH A 241 641 641 HOH HOH . 
E 5 HOH A 242 642 642 HOH HOH . 
E 5 HOH A 243 643 643 HOH HOH . 
E 5 HOH A 244 644 644 HOH HOH . 
E 5 HOH A 245 645 645 HOH HOH . 
E 5 HOH A 246 646 646 HOH HOH . 
E 5 HOH A 247 647 647 HOH HOH . 
E 5 HOH A 248 648 648 HOH HOH . 
E 5 HOH A 249 649 649 HOH HOH . 
E 5 HOH A 250 650 650 HOH HOH . 
E 5 HOH A 251 651 651 HOH HOH . 
E 5 HOH A 252 652 652 HOH HOH . 
E 5 HOH A 253 653 653 HOH HOH . 
E 5 HOH A 254 654 654 HOH HOH . 
E 5 HOH A 255 655 655 HOH HOH . 
E 5 HOH A 256 656 656 HOH HOH . 
E 5 HOH A 257 657 657 HOH HOH . 
E 5 HOH A 258 658 658 HOH HOH . 
E 5 HOH A 259 659 659 HOH HOH . 
E 5 HOH A 260 660 660 HOH HOH . 
E 5 HOH A 261 661 661 HOH HOH . 
E 5 HOH A 262 662 662 HOH HOH . 
E 5 HOH A 263 663 663 HOH HOH . 
E 5 HOH A 264 664 664 HOH HOH . 
E 5 HOH A 265 665 665 HOH HOH . 
E 5 HOH A 266 666 666 HOH HOH . 
E 5 HOH A 267 667 667 HOH HOH . 
E 5 HOH A 268 668 668 HOH HOH . 
E 5 HOH A 269 669 669 HOH HOH . 
E 5 HOH A 270 670 670 HOH HOH . 
E 5 HOH A 271 671 671 HOH HOH . 
E 5 HOH A 272 672 672 HOH HOH . 
E 5 HOH A 273 673 673 HOH HOH . 
E 5 HOH A 274 674 674 HOH HOH . 
E 5 HOH A 275 675 675 HOH HOH . 
E 5 HOH A 276 676 676 HOH HOH . 
E 5 HOH A 277 677 677 HOH HOH . 
E 5 HOH A 278 678 678 HOH HOH . 
E 5 HOH A 279 679 679 HOH HOH . 
E 5 HOH A 280 680 680 HOH HOH . 
E 5 HOH A 281 681 681 HOH HOH . 
E 5 HOH A 282 682 682 HOH HOH . 
E 5 HOH A 283 683 683 HOH HOH . 
E 5 HOH A 284 684 684 HOH HOH . 
E 5 HOH A 285 685 685 HOH HOH . 
E 5 HOH A 286 686 686 HOH HOH . 
E 5 HOH A 287 687 687 HOH HOH . 
E 5 HOH A 288 688 688 HOH HOH . 
E 5 HOH A 289 689 689 HOH HOH . 
E 5 HOH A 290 690 690 HOH HOH . 
E 5 HOH A 291 691 691 HOH HOH . 
E 5 HOH A 292 692 692 HOH HOH . 
E 5 HOH A 293 693 693 HOH HOH . 
E 5 HOH A 294 694 694 HOH HOH . 
E 5 HOH A 295 695 695 HOH HOH . 
E 5 HOH A 296 696 696 HOH HOH . 
E 5 HOH A 297 697 697 HOH HOH . 
E 5 HOH A 298 698 698 HOH HOH . 
E 5 HOH A 299 699 699 HOH HOH . 
E 5 HOH A 300 700 700 HOH HOH . 
E 5 HOH A 301 701 701 HOH HOH . 
E 5 HOH A 302 702 702 HOH HOH . 
E 5 HOH A 303 703 703 HOH HOH . 
E 5 HOH A 304 704 704 HOH HOH . 
E 5 HOH A 305 705 705 HOH HOH . 
E 5 HOH A 306 706 706 HOH HOH . 
E 5 HOH A 307 707 707 HOH HOH . 
E 5 HOH A 308 708 708 HOH HOH . 
E 5 HOH A 309 709 709 HOH HOH . 
E 5 HOH A 310 710 710 HOH HOH . 
E 5 HOH A 311 711 711 HOH HOH . 
E 5 HOH A 312 712 712 HOH HOH . 
E 5 HOH A 313 713 713 HOH HOH . 
E 5 HOH A 314 714 714 HOH HOH . 
E 5 HOH A 315 715 715 HOH HOH . 
E 5 HOH A 316 716 716 HOH HOH . 
E 5 HOH A 317 717 717 HOH HOH . 
E 5 HOH A 318 718 718 HOH HOH . 
E 5 HOH A 319 719 719 HOH HOH . 
E 5 HOH A 320 720 720 HOH HOH . 
E 5 HOH A 321 721 721 HOH HOH . 
E 5 HOH A 322 722 722 HOH HOH . 
E 5 HOH A 323 723 723 HOH HOH . 
E 5 HOH A 324 724 724 HOH HOH . 
E 5 HOH A 325 725 725 HOH HOH . 
E 5 HOH A 326 726 726 HOH HOH . 
E 5 HOH A 327 727 727 HOH HOH . 
E 5 HOH A 328 728 728 HOH HOH . 
E 5 HOH A 329 729 729 HOH HOH . 
E 5 HOH A 330 730 730 HOH HOH . 
E 5 HOH A 331 731 731 HOH HOH . 
E 5 HOH A 332 732 732 HOH HOH . 
E 5 HOH A 333 733 733 HOH HOH . 
E 5 HOH A 334 734 734 HOH HOH . 
E 5 HOH A 335 735 735 HOH HOH . 
E 5 HOH A 336 736 736 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PB GDP . . . D 4 34.88 15.884 42.599 1 15.83 ? PB GDP 355 A 1 
HETATM 2 O O1B GDP . . . D 4 34.406 15.013 43.721 1 15.6 ? O1B GDP 355 A 1 
HETATM 3 O O2B GDP . . . D 4 36.123 15.375 41.89 1 15.39 ? O2B GDP 355 A 1 
HETATM 4 O O3B GDP . . . D 4 33.78 16.372 41.638 1 15.73 ? O3B GDP 355 A 1 
HETATM 5 O O3A GDP . . . D 4 35.394 17.273 43.359 1 19.06 ? O3A GDP 355 A 1 
HETATM 6 P PA GDP . . . D 4 36.679 18.123 43.085 1 20.28 ? PA GDP 355 A 1 
HETATM 7 O O1A GDP . . . D 4 37.998 17.384 43.65 1 26.48 ? O1A GDP 355 A 1 
HETATM 8 O O2A GDP . . . D 4 36.835 18.641 41.706 1 21.32 ? O2A GDP 355 A 1 
HETATM 9 O O5' GDP . . . D 4 36.471 19.185 44.195 1 36.83 ? O5' GDP 355 A 1 
HETATM 10 C C5' GDP . . . D 4 35.612 20.353 44.001 1 19.21 ? C5' GDP 355 A 1 
HETATM 11 C C4' GDP . . . D 4 36.104 21.58 44.555 1 15.3 ? C4' GDP 355 A 1 
HETATM 12 O O4' GDP . . . D 4 36.163 21.719 45.988 1 13.33 ? O4' GDP 355 A 1 
HETATM 13 C C3' GDP . . . D 4 37.537 21.826 44.003 1 15.19 ? C3' GDP 355 A 1 
HETATM 14 O O3' GDP . . . D 4 37.529 23.236 43.564 1 15.37 ? O3' GDP 355 A 1 
HETATM 15 C C2' GDP . . . D 4 38.423 21.646 45.216 1 17.23 ? C2' GDP 355 A 1 
HETATM 16 O O2' GDP . . . D 4 39.603 22.387 45.128 1 15.88 ? O2' GDP 355 A 1 
HETATM 17 C C1' GDP . . . D 4 37.473 22 46.382 1 17.2 ? C1' GDP 355 A 1 
HETATM 18 N N9 GDP . . . D 4 37.729 21.123 47.632 1 15.96 ? N9 GDP 355 A 1 
HETATM 19 C C8 GDP . . . D 4 37.811 19.756 47.648 1 16.83 ? C8 GDP 355 A 1 
HETATM 20 N N7 GDP . . . D 4 38.032 19.325 48.887 1 16.8 ? N7 GDP 355 A 1 
HETATM 21 C C5 GDP . . . D 4 38.089 20.475 49.673 1 14.25 ? C5 GDP 355 A 1 
HETATM 22 C C6 GDP . . . D 4 38.296 20.623 51.064 1 16.63 ? C6 GDP 355 A 1 
HETATM 23 O O6 GDP . . . D 4 38.474 19.695 51.874 1 20.89 ? O6 GDP 355 A 1 
HETATM 24 N N1 GDP . . . D 4 38.286 21.974 51.492 1 14.05 ? N1 GDP 355 A 1 
HETATM 25 C C2 GDP . . . D 4 38.09 23.046 50.627 1 12.89 ? C2 GDP 355 A 1 
HETATM 26 N N2 GDP . . . D 4 38.1 24.295 51.14 1 13.39 ? N2 GDP 355 A 1 
HETATM 27 N N3 GDP . . . D 4 37.891 22.894 49.306 1 15.6 ? N3 GDP 355 A 1 
HETATM 28 C C4 GDP . . . D 4 37.905 21.591 48.907 1 15.51 ? C4 GDP 355 A 1 
#
_model_server_stats.io_time_ms              59 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    31 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           28 
#