data_1SVO # _model_server_result.job_id DNHKcXi7AGDzXYBpeu5dLg _model_server_result.datetime_utc '2024-11-15 09:29:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1svo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":700}' # _entry.id 1SVO # _exptl.entry_id 1SVO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1SVO _cell.length_a 120.444 _cell.length_b 120.444 _cell.length_c 131.767 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SVO _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 120.444 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 60.222 104.307564 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 52 A CYS 302 1_555 A SG CYS 55 A CYS 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf2 B SG CYS 52 B CYS 302 1_555 B SG CYS 55 B CYS 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc1 A SG CYS 52 A CYS 302 1_555 C ZN ZN . A ZN 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc2 A SG CYS 55 A CYS 305 1_555 C ZN ZN . A ZN 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc3 A NE2 HIS 63 A HIS 313 1_555 C ZN ZN . A ZN 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc4 A ND1 HIS 67 A HIS 317 1_555 C ZN ZN . A ZN 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc5 B SG CYS 52 B CYS 302 1_555 D ZN ZN . B ZN 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc6 B SG CYS 55 B CYS 305 1_555 D ZN ZN . B ZN 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc7 B NE2 HIS 63 B HIS 313 1_555 D ZN ZN . B ZN 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc8 B ND1 HIS 67 B HIS 317 1_555 D ZN ZN . B ZN 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.851 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1SVO _atom_sites.fract_transf_matrix[1][1] 0.008303 _atom_sites.fract_transf_matrix[1][2] 0.004794 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009587 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007589 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 700 700 ZN ZN2 . D 2 ZN B 1 700 700 ZN ZN2 . E 3 HOH A 1 1 1 HOH TIP . E 3 HOH A 2 2 2 HOH TIP . E 3 HOH A 3 4 4 HOH TIP . E 3 HOH A 4 7 7 HOH TIP . E 3 HOH A 5 9 9 HOH TIP . E 3 HOH A 6 11 11 HOH TIP . E 3 HOH A 7 15 15 HOH TIP . E 3 HOH A 8 16 16 HOH TIP . E 3 HOH A 9 19 19 HOH TIP . E 3 HOH A 10 24 24 HOH TIP . E 3 HOH A 11 26 26 HOH TIP . E 3 HOH A 12 29 29 HOH TIP . E 3 HOH A 13 30 30 HOH TIP . E 3 HOH A 14 32 32 HOH TIP . E 3 HOH A 15 33 33 HOH TIP . E 3 HOH A 16 34 34 HOH TIP . E 3 HOH A 17 38 38 HOH TIP . E 3 HOH A 18 40 40 HOH TIP . E 3 HOH A 19 41 41 HOH TIP . E 3 HOH A 20 42 42 HOH TIP . E 3 HOH A 21 43 43 HOH TIP . E 3 HOH A 22 45 45 HOH TIP . E 3 HOH A 23 48 48 HOH TIP . E 3 HOH A 24 51 51 HOH TIP . E 3 HOH A 25 52 52 HOH TIP . E 3 HOH A 26 54 54 HOH TIP . E 3 HOH A 27 55 55 HOH TIP . E 3 HOH A 28 56 56 HOH TIP . E 3 HOH A 29 57 57 HOH TIP . E 3 HOH A 30 58 58 HOH TIP . E 3 HOH A 31 60 60 HOH TIP . E 3 HOH A 32 61 61 HOH TIP . E 3 HOH A 33 64 64 HOH TIP . E 3 HOH A 34 66 66 HOH TIP . E 3 HOH A 35 67 67 HOH TIP . E 3 HOH A 36 68 68 HOH TIP . E 3 HOH A 37 69 69 HOH TIP . E 3 HOH A 38 70 70 HOH TIP . E 3 HOH A 39 71 71 HOH TIP . E 3 HOH A 40 72 72 HOH TIP . E 3 HOH A 41 74 74 HOH TIP . E 3 HOH A 42 79 79 HOH TIP . E 3 HOH A 43 80 80 HOH TIP . E 3 HOH A 44 82 82 HOH TIP . E 3 HOH A 45 83 83 HOH TIP . E 3 HOH A 46 85 85 HOH TIP . E 3 HOH A 47 86 86 HOH TIP . E 3 HOH A 48 89 89 HOH TIP . E 3 HOH A 49 90 90 HOH TIP . E 3 HOH A 50 92 92 HOH TIP . E 3 HOH A 51 94 94 HOH TIP . E 3 HOH A 52 95 95 HOH TIP . E 3 HOH A 53 96 96 HOH TIP . E 3 HOH A 54 100 100 HOH TIP . E 3 HOH A 55 102 102 HOH TIP . E 3 HOH A 56 103 103 HOH TIP . E 3 HOH A 57 104 104 HOH TIP . E 3 HOH A 58 105 105 HOH TIP . E 3 HOH A 59 108 108 HOH TIP . E 3 HOH A 60 110 110 HOH TIP . E 3 HOH A 61 111 111 HOH TIP . E 3 HOH A 62 112 112 HOH TIP . E 3 HOH A 63 113 113 HOH TIP . E 3 HOH A 64 114 114 HOH TIP . E 3 HOH A 65 116 116 HOH TIP . E 3 HOH A 66 117 117 HOH TIP . E 3 HOH A 67 119 119 HOH TIP . E 3 HOH A 68 121 121 HOH TIP . E 3 HOH A 69 122 122 HOH TIP . E 3 HOH A 70 123 123 HOH TIP . E 3 HOH A 71 124 124 HOH TIP . E 3 HOH A 72 125 125 HOH TIP . E 3 HOH A 73 128 128 HOH TIP . E 3 HOH A 74 130 130 HOH TIP . E 3 HOH A 75 131 131 HOH TIP . E 3 HOH A 76 132 132 HOH TIP . E 3 HOH A 77 133 133 HOH TIP . E 3 HOH A 78 138 138 HOH TIP . E 3 HOH A 79 139 139 HOH TIP . E 3 HOH A 80 140 140 HOH TIP . E 3 HOH A 81 142 142 HOH TIP . E 3 HOH A 82 143 143 HOH TIP . E 3 HOH A 83 149 149 HOH TIP . E 3 HOH A 84 151 151 HOH TIP . E 3 HOH A 85 152 152 HOH TIP . E 3 HOH A 86 153 153 HOH TIP . E 3 HOH A 87 154 154 HOH TIP . E 3 HOH A 88 156 156 HOH TIP . E 3 HOH A 89 159 159 HOH TIP . E 3 HOH A 90 161 161 HOH TIP . E 3 HOH A 91 163 163 HOH TIP . E 3 HOH A 92 165 165 HOH TIP . E 3 HOH A 93 167 167 HOH TIP . E 3 HOH A 94 168 168 HOH TIP . E 3 HOH A 95 169 169 HOH TIP . E 3 HOH A 96 171 171 HOH TIP . E 3 HOH A 97 173 173 HOH TIP . E 3 HOH A 98 174 174 HOH TIP . E 3 HOH A 99 175 175 HOH TIP . E 3 HOH A 100 183 183 HOH TIP . E 3 HOH A 101 184 184 HOH TIP . E 3 HOH A 102 185 185 HOH TIP . E 3 HOH A 103 187 187 HOH TIP . F 3 HOH B 1 3 3 HOH TIP . F 3 HOH B 2 5 5 HOH TIP . F 3 HOH B 3 6 6 HOH TIP . F 3 HOH B 4 8 8 HOH TIP . F 3 HOH B 5 10 10 HOH TIP . F 3 HOH B 6 12 12 HOH TIP . F 3 HOH B 7 13 13 HOH TIP . F 3 HOH B 8 14 14 HOH TIP . F 3 HOH B 9 17 17 HOH TIP . F 3 HOH B 10 18 18 HOH TIP . F 3 HOH B 11 20 20 HOH TIP . F 3 HOH B 12 21 21 HOH TIP . F 3 HOH B 13 22 22 HOH TIP . F 3 HOH B 14 23 23 HOH TIP . F 3 HOH B 15 25 25 HOH TIP . F 3 HOH B 16 27 27 HOH TIP . F 3 HOH B 17 28 28 HOH TIP . F 3 HOH B 18 31 31 HOH TIP . F 3 HOH B 19 35 35 HOH TIP . F 3 HOH B 20 36 36 HOH TIP . F 3 HOH B 21 37 37 HOH TIP . F 3 HOH B 22 39 39 HOH TIP . F 3 HOH B 23 44 44 HOH TIP . F 3 HOH B 24 46 46 HOH TIP . F 3 HOH B 25 47 47 HOH TIP . F 3 HOH B 26 49 49 HOH TIP . F 3 HOH B 27 50 50 HOH TIP . F 3 HOH B 28 53 53 HOH TIP . F 3 HOH B 29 59 59 HOH TIP . F 3 HOH B 30 62 62 HOH TIP . F 3 HOH B 31 63 63 HOH TIP . F 3 HOH B 32 65 65 HOH TIP . F 3 HOH B 33 73 73 HOH TIP . F 3 HOH B 34 75 75 HOH TIP . F 3 HOH B 35 76 76 HOH TIP . F 3 HOH B 36 77 77 HOH TIP . F 3 HOH B 37 78 78 HOH TIP . F 3 HOH B 38 81 81 HOH TIP . F 3 HOH B 39 84 84 HOH TIP . F 3 HOH B 40 87 87 HOH TIP . F 3 HOH B 41 88 88 HOH TIP . F 3 HOH B 42 91 91 HOH TIP . F 3 HOH B 43 93 93 HOH TIP . F 3 HOH B 44 97 97 HOH TIP . F 3 HOH B 45 98 98 HOH TIP . F 3 HOH B 46 99 99 HOH TIP . F 3 HOH B 47 101 101 HOH TIP . F 3 HOH B 48 106 106 HOH TIP . F 3 HOH B 49 107 107 HOH TIP . F 3 HOH B 50 109 109 HOH TIP . F 3 HOH B 51 115 115 HOH TIP . F 3 HOH B 52 118 118 HOH TIP . F 3 HOH B 53 120 120 HOH TIP . F 3 HOH B 54 126 126 HOH TIP . F 3 HOH B 55 127 127 HOH TIP . F 3 HOH B 56 129 129 HOH TIP . F 3 HOH B 57 134 134 HOH TIP . F 3 HOH B 58 135 135 HOH TIP . F 3 HOH B 59 136 136 HOH TIP . F 3 HOH B 60 137 137 HOH TIP . F 3 HOH B 61 141 141 HOH TIP . F 3 HOH B 62 144 144 HOH TIP . F 3 HOH B 63 145 145 HOH TIP . F 3 HOH B 64 146 146 HOH TIP . F 3 HOH B 65 147 147 HOH TIP . F 3 HOH B 66 148 148 HOH TIP . F 3 HOH B 67 150 150 HOH TIP . F 3 HOH B 68 155 155 HOH TIP . F 3 HOH B 69 157 157 HOH TIP . F 3 HOH B 70 158 158 HOH TIP . F 3 HOH B 71 160 160 HOH TIP . F 3 HOH B 72 162 162 HOH TIP . F 3 HOH B 73 164 164 HOH TIP . F 3 HOH B 74 166 166 HOH TIP . F 3 HOH B 75 170 170 HOH TIP . F 3 HOH B 76 172 172 HOH TIP . F 3 HOH B 77 176 176 HOH TIP . F 3 HOH B 78 177 177 HOH TIP . F 3 HOH B 79 178 178 HOH TIP . F 3 HOH B 80 179 179 HOH TIP . F 3 HOH B 81 180 180 HOH TIP . F 3 HOH B 82 181 181 HOH TIP . F 3 HOH B 83 182 182 HOH TIP . F 3 HOH B 84 186 186 HOH TIP . F 3 HOH B 85 188 188 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 30.656 _atom_site.Cartn_y 53.691 _atom_site.Cartn_z 11.606 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 53.1 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 700 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #