data_1SWP # _model_server_result.job_id tpjE5AHkOIX2Y0YuZ2Uqnw _model_server_result.datetime_utc '2024-11-23 22:23:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1swp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":400}' # _entry.id 1SWP # _exptl.entry_id 1SWP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 244.311 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BIOTIN _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.6 _cell.angle_gamma 90 _cell.entry_id 1SWP _cell.length_a 53.8 _cell.length_b 100 _cell.length_c 51.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SWP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 H N N # _chem_comp.formula 'C10 H16 N2 O3 S' _chem_comp.formula_weight 244.311 _chem_comp.id BTN _chem_comp.mon_nstd_flag . _chem_comp.name BIOTIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 O11 BTN doub 70 n n C11 O12 BTN sing 71 n n C11 C10 BTN sing 72 n n O12 HO2 BTN sing 73 n n C10 C9 BTN sing 74 n n C10 H101 BTN sing 75 n n C10 H102 BTN sing 76 n n C9 C8 BTN sing 77 n n C9 H91 BTN sing 78 n n C9 H92 BTN sing 79 n n C8 C7 BTN sing 80 n n C8 H81 BTN sing 81 n n C8 H82 BTN sing 82 n n C7 C2 BTN sing 83 n n C7 H71 BTN sing 84 n n C7 H72 BTN sing 85 n n C2 S1 BTN sing 86 n n C2 C4 BTN sing 87 n n C2 H2 BTN sing 88 n n S1 C6 BTN sing 89 n n C6 C5 BTN sing 90 n n C6 H61 BTN sing 91 n n C6 H62 BTN sing 92 n n C5 N1 BTN sing 93 n n C5 C4 BTN sing 94 n n C5 H5 BTN sing 95 n n N1 C3 BTN sing 96 n n N1 HN1 BTN sing 97 n n C3 O3 BTN doub 98 n n C3 N2 BTN sing 99 n n N2 C4 BTN sing 100 n n N2 HN2 BTN sing 101 n n C4 H4 BTN sing 102 n n # _atom_sites.entry_id 1SWP _atom_sites.fract_transf_matrix[1][1] 0.018587 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007737 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020911 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 BTN A 1 300 300 BTN BTN . F 2 BTN B 1 400 400 BTN BTN . G 3 BTQ C 1 500 500 BTQ BTN . H 2 BTN D 1 600 600 BTN BTN . I 4 HOH A 1 227 227 HOH HOH . I 4 HOH A 2 231 231 HOH HOH . I 4 HOH A 3 232 232 HOH HOH . I 4 HOH A 4 234 234 HOH HOH . I 4 HOH A 5 236 236 HOH HOH . I 4 HOH A 6 239 239 HOH HOH . I 4 HOH A 7 248 248 HOH HOH . I 4 HOH A 8 250 250 HOH HOH . I 4 HOH A 9 258 258 HOH HOH . I 4 HOH A 10 266 266 HOH HOH . I 4 HOH A 11 268 268 HOH HOH . I 4 HOH A 12 270 270 HOH HOH . I 4 HOH A 13 278 278 HOH HOH . I 4 HOH A 14 279 279 HOH HOH . I 4 HOH A 15 280 280 HOH HOH . I 4 HOH A 16 281 281 HOH HOH . I 4 HOH A 17 288 288 HOH HOH . I 4 HOH A 18 289 289 HOH HOH . I 4 HOH A 19 290 290 HOH HOH . I 4 HOH A 20 293 293 HOH HOH . I 4 HOH A 21 295 295 HOH HOH . I 4 HOH A 22 296 296 HOH HOH . I 4 HOH A 23 305 305 HOH HOH . I 4 HOH A 24 306 306 HOH HOH . I 4 HOH A 25 308 308 HOH HOH . I 4 HOH A 26 321 321 HOH HOH . I 4 HOH A 27 323 323 HOH HOH . I 4 HOH A 28 327 327 HOH HOH . I 4 HOH A 29 328 328 HOH HOH . I 4 HOH A 30 330 330 HOH HOH . I 4 HOH A 31 333 333 HOH HOH . I 4 HOH A 32 335 335 HOH HOH . I 4 HOH A 33 338 338 HOH HOH . I 4 HOH A 34 345 345 HOH HOH . I 4 HOH A 35 346 346 HOH HOH . I 4 HOH A 36 348 348 HOH HOH . I 4 HOH A 37 350 350 HOH HOH . I 4 HOH A 38 351 351 HOH HOH . I 4 HOH A 39 354 354 HOH HOH . I 4 HOH A 40 358 358 HOH HOH . I 4 HOH A 41 360 360 HOH HOH . I 4 HOH A 42 367 367 HOH HOH . I 4 HOH A 43 369 369 HOH HOH . I 4 HOH A 44 370 370 HOH HOH . I 4 HOH A 45 372 372 HOH HOH . I 4 HOH A 46 373 373 HOH HOH . I 4 HOH A 47 379 379 HOH HOH . I 4 HOH A 48 380 380 HOH HOH . I 4 HOH A 49 383 383 HOH HOH . J 4 HOH B 1 203 203 HOH HOH . J 4 HOH B 2 205 205 HOH HOH . J 4 HOH B 3 207 207 HOH HOH . J 4 HOH B 4 208 208 HOH HOH . J 4 HOH B 5 212 212 HOH HOH . J 4 HOH B 6 214 214 HOH HOH . J 4 HOH B 7 215 215 HOH HOH . J 4 HOH B 8 217 217 HOH HOH . J 4 HOH B 9 222 222 HOH HOH . J 4 HOH B 10 235 235 HOH HOH . J 4 HOH B 11 244 244 HOH HOH . J 4 HOH B 12 257 257 HOH HOH . J 4 HOH B 13 259 259 HOH HOH . J 4 HOH B 14 262 262 HOH HOH . J 4 HOH B 15 264 264 HOH HOH . J 4 HOH B 16 272 272 HOH HOH . J 4 HOH B 17 273 273 HOH HOH . J 4 HOH B 18 274 274 HOH HOH . J 4 HOH B 19 284 284 HOH HOH . J 4 HOH B 20 287 287 HOH HOH . J 4 HOH B 21 291 291 HOH HOH . J 4 HOH B 22 300 300 HOH HOH . J 4 HOH B 23 303 303 HOH HOH . J 4 HOH B 24 307 307 HOH HOH . J 4 HOH B 25 309 309 HOH HOH . J 4 HOH B 26 310 310 HOH HOH . J 4 HOH B 27 313 313 HOH HOH . J 4 HOH B 28 315 315 HOH HOH . J 4 HOH B 29 319 319 HOH HOH . J 4 HOH B 30 322 322 HOH HOH . J 4 HOH B 31 324 324 HOH HOH . J 4 HOH B 32 334 334 HOH HOH . J 4 HOH B 33 339 339 HOH HOH . J 4 HOH B 34 342 342 HOH HOH . J 4 HOH B 35 343 343 HOH HOH . J 4 HOH B 36 344 344 HOH HOH . J 4 HOH B 37 352 352 HOH HOH . J 4 HOH B 38 357 357 HOH HOH . J 4 HOH B 39 364 364 HOH HOH . J 4 HOH B 40 365 365 HOH HOH . J 4 HOH B 41 368 368 HOH HOH . J 4 HOH B 42 374 374 HOH HOH . J 4 HOH B 43 377 377 HOH HOH . J 4 HOH B 44 384 384 HOH HOH . K 4 HOH C 1 201 201 HOH HOH . K 4 HOH C 2 202 202 HOH HOH . K 4 HOH C 3 204 204 HOH HOH . K 4 HOH C 4 206 206 HOH HOH . K 4 HOH C 5 210 210 HOH HOH . K 4 HOH C 6 218 218 HOH HOH . K 4 HOH C 7 220 220 HOH HOH . K 4 HOH C 8 224 224 HOH HOH . K 4 HOH C 9 225 225 HOH HOH . K 4 HOH C 10 228 228 HOH HOH . K 4 HOH C 11 230 230 HOH HOH . K 4 HOH C 12 233 233 HOH HOH . K 4 HOH C 13 237 237 HOH HOH . K 4 HOH C 14 240 240 HOH HOH . K 4 HOH C 15 241 241 HOH HOH . K 4 HOH C 16 242 242 HOH HOH . K 4 HOH C 17 243 243 HOH HOH . K 4 HOH C 18 246 246 HOH HOH . K 4 HOH C 19 247 247 HOH HOH . K 4 HOH C 20 249 249 HOH HOH . K 4 HOH C 21 251 251 HOH HOH . K 4 HOH C 22 253 253 HOH HOH . K 4 HOH C 23 255 255 HOH HOH . K 4 HOH C 24 256 256 HOH HOH . K 4 HOH C 25 263 263 HOH HOH . K 4 HOH C 26 265 265 HOH HOH . K 4 HOH C 27 267 267 HOH HOH . K 4 HOH C 28 271 271 HOH HOH . K 4 HOH C 29 275 275 HOH HOH . K 4 HOH C 30 276 276 HOH HOH . K 4 HOH C 31 277 277 HOH HOH . K 4 HOH C 32 282 282 HOH HOH . K 4 HOH C 33 283 283 HOH HOH . K 4 HOH C 34 285 285 HOH HOH . K 4 HOH C 35 297 297 HOH HOH . K 4 HOH C 36 302 302 HOH HOH . K 4 HOH C 37 304 304 HOH HOH . K 4 HOH C 38 311 311 HOH HOH . K 4 HOH C 39 314 314 HOH HOH . K 4 HOH C 40 316 316 HOH HOH . K 4 HOH C 41 317 317 HOH HOH . K 4 HOH C 42 320 320 HOH HOH . K 4 HOH C 43 326 326 HOH HOH . K 4 HOH C 44 331 331 HOH HOH . K 4 HOH C 45 332 332 HOH HOH . K 4 HOH C 46 337 337 HOH HOH . K 4 HOH C 47 340 340 HOH HOH . K 4 HOH C 48 341 341 HOH HOH . K 4 HOH C 49 347 347 HOH HOH . K 4 HOH C 50 349 349 HOH HOH . K 4 HOH C 51 359 359 HOH HOH . K 4 HOH C 52 375 375 HOH HOH . K 4 HOH C 53 376 376 HOH HOH . K 4 HOH C 54 378 378 HOH HOH . K 4 HOH C 55 382 382 HOH HOH . L 4 HOH D 1 209 209 HOH HOH . L 4 HOH D 2 211 211 HOH HOH . L 4 HOH D 3 213 213 HOH HOH . L 4 HOH D 4 216 216 HOH HOH . L 4 HOH D 5 219 219 HOH HOH . L 4 HOH D 6 221 221 HOH HOH . L 4 HOH D 7 223 223 HOH HOH . L 4 HOH D 8 226 226 HOH HOH . L 4 HOH D 9 229 229 HOH HOH . L 4 HOH D 10 238 238 HOH HOH . L 4 HOH D 11 245 245 HOH HOH . L 4 HOH D 12 252 252 HOH HOH . L 4 HOH D 13 254 254 HOH HOH . L 4 HOH D 14 260 260 HOH HOH . L 4 HOH D 15 261 261 HOH HOH . L 4 HOH D 16 269 269 HOH HOH . L 4 HOH D 17 286 286 HOH HOH . L 4 HOH D 18 292 292 HOH HOH . L 4 HOH D 19 294 294 HOH HOH . L 4 HOH D 20 298 298 HOH HOH . L 4 HOH D 21 299 299 HOH HOH . L 4 HOH D 22 301 301 HOH HOH . L 4 HOH D 23 312 312 HOH HOH . L 4 HOH D 24 318 318 HOH HOH . L 4 HOH D 25 325 325 HOH HOH . L 4 HOH D 26 329 329 HOH HOH . L 4 HOH D 27 336 336 HOH HOH . L 4 HOH D 28 353 353 HOH HOH . L 4 HOH D 29 355 355 HOH HOH . L 4 HOH D 30 356 356 HOH HOH . L 4 HOH D 31 361 361 HOH HOH . L 4 HOH D 32 362 362 HOH HOH . L 4 HOH D 33 363 363 HOH HOH . L 4 HOH D 34 366 366 HOH HOH . L 4 HOH D 35 371 371 HOH HOH . L 4 HOH D 36 381 381 HOH HOH . L 4 HOH D 37 385 385 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 BTN . . . F 2 28.165 -21.275 3.985 1 26.57 ? C11 BTN 400 B 1 HETATM 2 O O11 BTN . . . F 2 28.019 -21.166 2.738 1 40.96 ? O11 BTN 400 B 1 HETATM 3 O O12 BTN . . . F 2 28.546 -20.298 4.684 1 22.66 ? O12 BTN 400 B 1 HETATM 4 C C10 BTN . . . F 2 27.899 -22.613 4.57 1 23.65 ? C10 BTN 400 B 1 HETATM 5 C C9 BTN . . . F 2 26.826 -23.393 3.792 1 21.31 ? C9 BTN 400 B 1 HETATM 6 C C8 BTN . . . F 2 25.453 -22.784 4.032 1 18.69 ? C8 BTN 400 B 1 HETATM 7 C C7 BTN . . . F 2 24.27 -23.6 3.453 1 17.11 ? C7 BTN 400 B 1 HETATM 8 C C2 BTN . . . F 2 22.889 -23.044 3.718 1 16.09 ? C2 BTN 400 B 1 HETATM 9 S S1 BTN . . . F 2 22.277 -23.112 5.446 1 19.62 ? S1 BTN 400 B 1 HETATM 10 C C6 BTN . . . F 2 20.67 -22.463 4.869 1 18.21 ? C6 BTN 400 B 1 HETATM 11 C C5 BTN . . . F 2 20.37 -23.163 3.554 1 15.86 ? C5 BTN 400 B 1 HETATM 12 N N1 BTN . . . F 2 19.713 -24.448 3.711 1 13.32 ? N1 BTN 400 B 1 HETATM 13 C C3 BTN . . . F 2 20.465 -25.457 3.248 1 14.94 ? C3 BTN 400 B 1 HETATM 14 O O3 BTN . . . F 2 20.166 -26.677 3.235 1 27.44 ? O3 BTN 400 B 1 HETATM 15 N N2 BTN . . . F 2 21.636 -24.975 2.773 1 12.57 ? N2 BTN 400 B 1 HETATM 16 C C4 BTN . . . F 2 21.718 -23.531 2.889 1 14.87 ? C4 BTN 400 B 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 16 #