data_1SWT # _model_server_result.job_id NhwnF4p8PCJi-m-bYV1nIg _model_server_result.datetime_utc '2024-11-24 06:06:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1swt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 1SWT # _exptl.entry_id 1SWT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 244.311 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BIOTIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1SWT _cell.length_a 55.7 _cell.length_b 84.8 _cell.length_c 50 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SWT _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 84.8 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C10 H16 N2 O3 S' _chem_comp.formula_weight 244.311 _chem_comp.id BTN _chem_comp.mon_nstd_flag . _chem_comp.name BIOTIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 O11 BTN doub 70 n n C11 O12 BTN sing 71 n n C11 C10 BTN sing 72 n n O12 HO2 BTN sing 73 n n C10 C9 BTN sing 74 n n C10 H101 BTN sing 75 n n C10 H102 BTN sing 76 n n C9 C8 BTN sing 77 n n C9 H91 BTN sing 78 n n C9 H92 BTN sing 79 n n C8 C7 BTN sing 80 n n C8 H81 BTN sing 81 n n C8 H82 BTN sing 82 n n C7 C2 BTN sing 83 n n C7 H71 BTN sing 84 n n C7 H72 BTN sing 85 n n C2 S1 BTN sing 86 n n C2 C4 BTN sing 87 n n C2 H2 BTN sing 88 n n S1 C6 BTN sing 89 n n C6 C5 BTN sing 90 n n C6 H61 BTN sing 91 n n C6 H62 BTN sing 92 n n C5 N1 BTN sing 93 n n C5 C4 BTN sing 94 n n C5 H5 BTN sing 95 n n N1 C3 BTN sing 96 n n N1 HN1 BTN sing 97 n n C3 O3 BTN doub 98 n n C3 N2 BTN sing 99 n n N2 C4 BTN sing 100 n n N2 HN2 BTN sing 101 n n C4 H4 BTN sing 102 n n # _atom_sites.entry_id 1SWT _atom_sites.fract_transf_matrix[1][1] 0.017953 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011792 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BTN A 1 500 300 BTN BTN . D 2 BTN B 1 600 400 BTN BTN . E 3 HOH A 1 201 201 HOH HOH . E 3 HOH A 2 204 204 HOH HOH . E 3 HOH A 3 205 205 HOH HOH . E 3 HOH A 4 208 208 HOH HOH . E 3 HOH A 5 209 209 HOH HOH . E 3 HOH A 6 210 210 HOH HOH . E 3 HOH A 7 215 215 HOH HOH . E 3 HOH A 8 216 216 HOH HOH . E 3 HOH A 9 217 217 HOH HOH . E 3 HOH A 10 224 224 HOH HOH . E 3 HOH A 11 225 225 HOH HOH . E 3 HOH A 12 226 226 HOH HOH . E 3 HOH A 13 227 227 HOH HOH . E 3 HOH A 14 228 228 HOH HOH . E 3 HOH A 15 229 229 HOH HOH . E 3 HOH A 16 231 231 HOH HOH . E 3 HOH A 17 232 232 HOH HOH . E 3 HOH A 18 236 236 HOH HOH . E 3 HOH A 19 240 240 HOH HOH . E 3 HOH A 20 242 242 HOH HOH . E 3 HOH A 21 245 245 HOH HOH . E 3 HOH A 22 246 246 HOH HOH . E 3 HOH A 23 249 249 HOH HOH . E 3 HOH A 24 250 250 HOH HOH . E 3 HOH A 25 251 251 HOH HOH . E 3 HOH A 26 252 252 HOH HOH . E 3 HOH A 27 256 256 HOH HOH . E 3 HOH A 28 257 257 HOH HOH . E 3 HOH A 29 260 260 HOH HOH . E 3 HOH A 30 262 262 HOH HOH . E 3 HOH A 31 263 263 HOH HOH . E 3 HOH A 32 264 264 HOH HOH . E 3 HOH A 33 269 269 HOH HOH . E 3 HOH A 34 270 270 HOH HOH . E 3 HOH A 35 273 273 HOH HOH . E 3 HOH A 36 274 274 HOH HOH . E 3 HOH A 37 279 279 HOH HOH . E 3 HOH A 38 280 280 HOH HOH . E 3 HOH A 39 282 282 HOH HOH . E 3 HOH A 40 283 283 HOH HOH . E 3 HOH A 41 285 285 HOH HOH . E 3 HOH A 42 287 287 HOH HOH . E 3 HOH A 43 288 288 HOH HOH . E 3 HOH A 44 298 298 HOH HOH . E 3 HOH A 45 303 303 HOH HOH . F 3 HOH B 1 202 202 HOH HOH . F 3 HOH B 2 203 203 HOH HOH . F 3 HOH B 3 206 206 HOH HOH . F 3 HOH B 4 207 207 HOH HOH . F 3 HOH B 5 211 211 HOH HOH . F 3 HOH B 6 212 212 HOH HOH . F 3 HOH B 7 213 213 HOH HOH . F 3 HOH B 8 214 214 HOH HOH . F 3 HOH B 9 218 218 HOH HOH . F 3 HOH B 10 219 219 HOH HOH . F 3 HOH B 11 220 220 HOH HOH . F 3 HOH B 12 221 221 HOH HOH . F 3 HOH B 13 222 222 HOH HOH . F 3 HOH B 14 223 223 HOH HOH . F 3 HOH B 15 230 230 HOH HOH . F 3 HOH B 16 233 233 HOH HOH . F 3 HOH B 17 234 234 HOH HOH . F 3 HOH B 18 235 235 HOH HOH . F 3 HOH B 19 237 237 HOH HOH . F 3 HOH B 20 238 238 HOH HOH . F 3 HOH B 21 239 239 HOH HOH . F 3 HOH B 22 241 241 HOH HOH . F 3 HOH B 23 243 243 HOH HOH . F 3 HOH B 24 244 244 HOH HOH . F 3 HOH B 25 247 247 HOH HOH . F 3 HOH B 26 248 248 HOH HOH . F 3 HOH B 27 253 253 HOH HOH . F 3 HOH B 28 254 254 HOH HOH . F 3 HOH B 29 255 255 HOH HOH . F 3 HOH B 30 258 258 HOH HOH . F 3 HOH B 31 259 259 HOH HOH . F 3 HOH B 32 261 261 HOH HOH . F 3 HOH B 33 265 265 HOH HOH . F 3 HOH B 34 266 266 HOH HOH . F 3 HOH B 35 267 267 HOH HOH . F 3 HOH B 36 268 268 HOH HOH . F 3 HOH B 37 271 271 HOH HOH . F 3 HOH B 38 272 272 HOH HOH . F 3 HOH B 39 275 275 HOH HOH . F 3 HOH B 40 276 276 HOH HOH . F 3 HOH B 41 277 277 HOH HOH . F 3 HOH B 42 278 278 HOH HOH . F 3 HOH B 43 281 281 HOH HOH . F 3 HOH B 44 284 284 HOH HOH . F 3 HOH B 45 286 286 HOH HOH . F 3 HOH B 46 289 289 HOH HOH . F 3 HOH B 47 290 290 HOH HOH . F 3 HOH B 48 291 291 HOH HOH . F 3 HOH B 49 292 292 HOH HOH . F 3 HOH B 50 293 293 HOH HOH . F 3 HOH B 51 294 294 HOH HOH . F 3 HOH B 52 295 295 HOH HOH . F 3 HOH B 53 296 296 HOH HOH . F 3 HOH B 54 297 297 HOH HOH . F 3 HOH B 55 299 299 HOH HOH . F 3 HOH B 56 300 300 HOH HOH . F 3 HOH B 57 301 301 HOH HOH . F 3 HOH B 58 302 302 HOH HOH . F 3 HOH B 59 304 304 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 BTN . . . C 2 -10.147 39.76 27.648 1 23.91 ? C11 BTN 500 A 1 HETATM 2 O O11 BTN . . . C 2 -9.499 38.982 28.395 1 26.09 ? O11 BTN 500 A 1 HETATM 3 O O12 BTN . . . C 2 -9.757 40.939 27.459 1 29.04 ? O12 BTN 500 A 1 HETATM 4 C C10 BTN . . . C 2 -11.37 39.223 27.003 1 25.47 ? C10 BTN 500 A 1 HETATM 5 C C9 BTN . . . C 2 -11.237 37.723 26.644 1 30.03 ? C9 BTN 500 A 1 HETATM 6 C C8 BTN . . . C 2 -10.321 37.56 25.439 1 28.42 ? C8 BTN 500 A 1 HETATM 7 C C7 BTN . . . C 2 -10.314 36.174 24.765 1 27.97 ? C7 BTN 500 A 1 HETATM 8 C C2 BTN . . . C 2 -9.332 35.945 23.642 1 22.4 ? C2 BTN 500 A 1 HETATM 9 S S1 BTN . . . C 2 -9.715 36.69 22.004 1 26 ? S1 BTN 500 A 1 HETATM 10 C C6 BTN . . . C 2 -8.219 35.882 21.326 1 23.05 ? C6 BTN 500 A 1 HETATM 11 C C5 BTN . . . C 2 -8.181 34.488 21.93 1 21.84 ? C5 BTN 500 A 1 HETATM 12 N N1 BTN . . . C 2 -8.945 33.506 21.202 1 22.73 ? N1 BTN 500 A 1 HETATM 13 C C3 BTN . . . C 2 -9.966 33.01 21.917 1 23.98 ? C3 BTN 500 A 1 HETATM 14 O O3 BTN . . . C 2 -10.78 32.137 21.54 1 25.09 ? O3 BTN 500 A 1 HETATM 15 N N2 BTN . . . C 2 -9.973 33.583 23.139 1 23.98 ? N2 BTN 500 A 1 HETATM 16 C C4 BTN . . . C 2 -8.885 34.538 23.307 1 18.94 ? C4 BTN 500 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 215 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #