data_1SX6 # _model_server_result.job_id PFM5yy04lHt5_mO7AxO0kQ _model_server_result.datetime_utc '2024-11-27 04:28:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1sx6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":303}' # _entry.id 1SX6 # _exptl.entry_id 1SX6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 114.229 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-OCTANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 122.52 _cell.angle_gamma 90 _cell.entry_id 1SX6 _cell.length_a 75.599 _cell.length_b 49.073 _cell.length_c 68.538 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SX6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GAL _pdbx_entity_branch_link.comp_id_2 BGC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B BGC 1 B 1 BGC B 300 LAT 2 n B GAL 2 B 2 GAL B 300 LAT # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C N2 SPH . A SPH 301 1_555 D C1 OLA . A OLA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.275 ? covale ? covale2 C C1 SPH . A SPH 301 1_555 B O1 BGC . B BGC 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale3 B O4 BGC . B BGC 1 1_555 B C1 GAL . B GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.406 sing # _chem_comp.formula 'C8 H18' _chem_comp.formula_weight 114.229 _chem_comp.id OCT _chem_comp.mon_nstd_flag . _chem_comp.name N-OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 OCT sing 285 n n C1 H11 OCT sing 286 n n C1 H12 OCT sing 287 n n C1 H13 OCT sing 288 n n C2 C3 OCT sing 289 n n C2 H21 OCT sing 290 n n C2 H22 OCT sing 291 n n C3 C4 OCT sing 292 n n C3 H31 OCT sing 293 n n C3 H32 OCT sing 294 n n C4 C5 OCT sing 295 n n C4 H41 OCT sing 296 n n C4 H42 OCT sing 297 n n C5 C6 OCT sing 298 n n C5 H51 OCT sing 299 n n C5 H52 OCT sing 300 n n C6 C7 OCT sing 301 n n C6 H61 OCT sing 302 n n C6 H62 OCT sing 303 n n C7 C8 OCT sing 304 n n C7 H71 OCT sing 305 n n C7 H72 OCT sing 306 n n C8 H81 OCT sing 307 n n C8 H82 OCT sing 308 n n C8 H83 OCT sing 309 n n # _atom_sites.entry_id 1SX6 _atom_sites.fract_transf_matrix[1][1] 0.013228 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008434 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020378 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017304 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SPH A 1 301 301 SPH SPH . D 4 OLA A 1 302 302 OLA ACL . E 5 OCT A 1 303 303 OCT LMM . F 6 HOH A 1 304 1 HOH HOH . F 6 HOH A 2 305 2 HOH HOH . F 6 HOH A 3 306 3 HOH HOH . F 6 HOH A 4 307 4 HOH HOH . F 6 HOH A 5 308 5 HOH HOH . F 6 HOH A 6 309 6 HOH HOH . F 6 HOH A 7 310 7 HOH HOH . F 6 HOH A 8 311 8 HOH HOH . F 6 HOH A 9 312 9 HOH HOH . F 6 HOH A 10 313 10 HOH HOH . F 6 HOH A 11 314 11 HOH HOH . F 6 HOH A 12 315 12 HOH HOH . F 6 HOH A 13 316 13 HOH HOH . F 6 HOH A 14 317 14 HOH HOH . F 6 HOH A 15 318 15 HOH HOH . F 6 HOH A 16 319 16 HOH HOH . F 6 HOH A 17 320 17 HOH HOH . F 6 HOH A 18 321 18 HOH HOH . F 6 HOH A 19 322 19 HOH HOH . F 6 HOH A 20 323 20 HOH HOH . F 6 HOH A 21 324 21 HOH HOH . F 6 HOH A 22 325 22 HOH HOH . F 6 HOH A 23 326 23 HOH HOH . F 6 HOH A 24 327 24 HOH HOH . F 6 HOH A 25 328 25 HOH HOH . F 6 HOH A 26 329 26 HOH HOH . F 6 HOH A 27 330 27 HOH HOH . F 6 HOH A 28 331 28 HOH HOH . F 6 HOH A 29 332 29 HOH HOH . F 6 HOH A 30 333 30 HOH HOH . F 6 HOH A 31 334 31 HOH HOH . F 6 HOH A 32 335 32 HOH HOH . F 6 HOH A 33 336 33 HOH HOH . F 6 HOH A 34 337 34 HOH HOH . F 6 HOH A 35 338 35 HOH HOH . F 6 HOH A 36 339 36 HOH HOH . F 6 HOH A 37 340 37 HOH HOH . F 6 HOH A 38 341 38 HOH HOH . F 6 HOH A 39 342 39 HOH HOH . F 6 HOH A 40 343 40 HOH HOH . F 6 HOH A 41 344 41 HOH HOH . F 6 HOH A 42 345 42 HOH HOH . F 6 HOH A 43 346 43 HOH HOH . F 6 HOH A 44 347 44 HOH HOH . F 6 HOH A 45 348 45 HOH HOH . F 6 HOH A 46 349 46 HOH HOH . F 6 HOH A 47 350 47 HOH HOH . F 6 HOH A 48 351 48 HOH HOH . F 6 HOH A 49 352 49 HOH HOH . F 6 HOH A 50 353 50 HOH HOH . F 6 HOH A 51 354 51 HOH HOH . F 6 HOH A 52 355 52 HOH HOH . F 6 HOH A 53 356 53 HOH HOH . F 6 HOH A 54 357 54 HOH HOH . F 6 HOH A 55 358 55 HOH HOH . F 6 HOH A 56 359 56 HOH HOH . F 6 HOH A 57 360 57 HOH HOH . F 6 HOH A 58 361 59 HOH HOH . F 6 HOH A 59 362 61 HOH HOH . F 6 HOH A 60 363 62 HOH HOH . F 6 HOH A 61 364 63 HOH HOH . F 6 HOH A 62 365 64 HOH HOH . F 6 HOH A 63 366 65 HOH HOH . F 6 HOH A 64 367 66 HOH HOH . F 6 HOH A 65 368 67 HOH HOH . F 6 HOH A 66 369 68 HOH HOH . F 6 HOH A 67 370 69 HOH HOH . F 6 HOH A 68 371 70 HOH HOH . F 6 HOH A 69 372 72 HOH HOH . F 6 HOH A 70 373 73 HOH HOH . F 6 HOH A 71 374 74 HOH HOH . F 6 HOH A 72 375 76 HOH HOH . F 6 HOH A 73 376 77 HOH HOH . F 6 HOH A 74 377 78 HOH HOH . F 6 HOH A 75 378 79 HOH HOH . F 6 HOH A 76 379 80 HOH HOH . F 6 HOH A 77 380 81 HOH HOH . F 6 HOH A 78 381 82 HOH HOH . F 6 HOH A 79 382 83 HOH HOH . F 6 HOH A 80 383 84 HOH HOH . F 6 HOH A 81 384 85 HOH HOH . F 6 HOH A 82 385 86 HOH HOH . F 6 HOH A 83 386 87 HOH HOH . F 6 HOH A 84 387 88 HOH HOH . F 6 HOH A 85 388 90 HOH HOH . F 6 HOH A 86 389 91 HOH HOH . F 6 HOH A 87 390 92 HOH HOH . F 6 HOH A 88 391 93 HOH HOH . F 6 HOH A 89 392 94 HOH HOH . F 6 HOH A 90 393 95 HOH HOH . F 6 HOH A 91 394 96 HOH HOH . F 6 HOH A 92 395 98 HOH HOH . F 6 HOH A 93 396 101 HOH HOH . F 6 HOH A 94 397 102 HOH HOH . F 6 HOH A 95 398 103 HOH HOH . F 6 HOH A 96 399 105 HOH HOH . F 6 HOH A 97 400 106 HOH HOH . F 6 HOH A 98 401 107 HOH HOH . F 6 HOH A 99 402 108 HOH HOH . F 6 HOH A 100 403 109 HOH HOH . F 6 HOH A 101 404 110 HOH HOH . F 6 HOH A 102 405 111 HOH HOH . F 6 HOH A 103 406 112 HOH HOH . F 6 HOH A 104 407 113 HOH HOH . F 6 HOH A 105 408 115 HOH HOH . F 6 HOH A 106 409 116 HOH HOH . F 6 HOH A 107 410 117 HOH HOH . F 6 HOH A 108 411 118 HOH HOH . F 6 HOH A 109 412 119 HOH HOH . F 6 HOH A 110 413 120 HOH HOH . F 6 HOH A 111 414 121 HOH HOH . F 6 HOH A 112 415 122 HOH HOH . F 6 HOH A 113 416 124 HOH HOH . F 6 HOH A 114 417 125 HOH HOH . F 6 HOH A 115 418 126 HOH HOH . F 6 HOH A 116 419 128 HOH HOH . F 6 HOH A 117 420 129 HOH HOH . F 6 HOH A 118 421 131 HOH HOH . F 6 HOH A 119 422 132 HOH HOH . F 6 HOH A 120 423 133 HOH HOH . F 6 HOH A 121 424 134 HOH HOH . F 6 HOH A 122 425 135 HOH HOH . F 6 HOH A 123 426 136 HOH HOH . F 6 HOH A 124 427 137 HOH HOH . F 6 HOH A 125 428 138 HOH HOH . F 6 HOH A 126 429 140 HOH HOH . F 6 HOH A 127 430 142 HOH HOH . F 6 HOH A 128 431 143 HOH HOH . F 6 HOH A 129 432 144 HOH HOH . F 6 HOH A 130 433 145 HOH HOH . F 6 HOH A 131 434 146 HOH HOH . F 6 HOH A 132 435 148 HOH HOH . F 6 HOH A 133 436 149 HOH HOH . F 6 HOH A 134 437 150 HOH HOH . F 6 HOH A 135 438 151 HOH HOH . F 6 HOH A 136 439 152 HOH HOH . F 6 HOH A 137 440 153 HOH HOH . F 6 HOH A 138 441 154 HOH HOH . F 6 HOH A 139 442 155 HOH HOH . F 6 HOH A 140 443 157 HOH HOH . F 6 HOH A 141 444 159 HOH HOH . F 6 HOH A 142 445 160 HOH HOH . F 6 HOH A 143 446 162 HOH HOH . F 6 HOH A 144 447 166 HOH HOH . F 6 HOH A 145 448 167 HOH HOH . F 6 HOH A 146 449 168 HOH HOH . F 6 HOH A 147 450 169 HOH HOH . F 6 HOH A 148 451 170 HOH HOH . F 6 HOH A 149 452 171 HOH HOH . F 6 HOH A 150 453 172 HOH HOH . F 6 HOH A 151 454 173 HOH HOH . F 6 HOH A 152 455 174 HOH HOH . F 6 HOH A 153 456 175 HOH HOH . F 6 HOH A 154 457 176 HOH HOH . F 6 HOH A 155 458 177 HOH HOH . F 6 HOH A 156 459 178 HOH HOH . F 6 HOH A 157 460 180 HOH HOH . F 6 HOH A 158 461 181 HOH HOH . F 6 HOH A 159 462 182 HOH HOH . F 6 HOH A 160 463 183 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OCT . . . E 5 10.422 15.107 17.68 1 52.88 ? C1 OCT 303 A 1 HETATM 2 C C2 OCT . . . E 5 11.375 14.036 18.175 1 54.04 ? C2 OCT 303 A 1 HETATM 3 C C3 OCT . . . E 5 11.771 14.31 19.626 1 55.43 ? C3 OCT 303 A 1 HETATM 4 C C4 OCT . . . E 5 12.845 13.351 20.148 1 55.8 ? C4 OCT 303 A 1 HETATM 5 C C5 OCT . . . E 5 12.225 12.314 21.091 1 56.37 ? C5 OCT 303 A 1 HETATM 6 C C6 OCT . . . E 5 13.217 11.258 21.581 1 56.52 ? C6 OCT 303 A 1 HETATM 7 C C7 OCT . . . E 5 12.628 9.843 21.711 1 57.64 ? C7 OCT 303 A 1 HETATM 8 C C8 OCT . . . E 5 11.236 9.725 22.317 1 58.44 ? C8 OCT 303 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 8 #