data_1SY0 # _model_server_result.job_id mjuBiTrSsjA_VVF1EfzpaA _model_server_result.datetime_utc '2024-11-23 09:08:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1sy0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 1SY0 # _exptl.entry_id 1SY0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 18.038 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'AMMONIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.66 _cell.angle_gamma 90 _cell.entry_id 1SY0 _cell.length_a 70.3 _cell.length_b 42.763 _cell.length_c 52.89 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SY0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 A CYS 2 1_555 A SG CYS 122 A CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf2 A SG CYS 41 A CYS 41 1_555 A SG CYS 171 A CYS 171 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.013 ? disulf ? disulf3 A SG CYS 41 A CYS 41 1_555 A SG CYS 171 A CYS 171 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.003 ? metalc ? metalc1 A NE2 HIS 59 A HIS 59 1_555 C FE HEM . A HEM 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc2 C FE HEM . A HEM 185 1_555 B N NH4 . A NH4 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? # _chem_comp.formula 'H4 N 1' _chem_comp.formula_weight 18.038 _chem_comp.id NH4 _chem_comp.mon_nstd_flag . _chem_comp.name 'AMMONIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N HN1 NH4 sing 319 n n N HN2 NH4 sing 320 n n N HN3 NH4 sing 321 n n N HN4 NH4 sing 322 n n # _atom_sites.entry_id 1SY0 _atom_sites.fract_transf_matrix[1][1] 0.014225 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000911 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023385 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018946 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NH4 A 1 201 201 NH4 NH4 . C 3 HEM A 1 185 185 HEM HEM . D 4 HOH A 1 202 202 HOH HOH . D 4 HOH A 2 203 203 HOH HOH . D 4 HOH A 3 204 204 HOH HOH . D 4 HOH A 4 205 205 HOH HOH . D 4 HOH A 5 206 206 HOH HOH . D 4 HOH A 6 207 207 HOH HOH . D 4 HOH A 7 208 208 HOH HOH . D 4 HOH A 8 209 209 HOH HOH . D 4 HOH A 9 210 210 HOH HOH . D 4 HOH A 10 211 211 HOH HOH . D 4 HOH A 11 212 212 HOH HOH . D 4 HOH A 12 213 213 HOH HOH . D 4 HOH A 13 214 214 HOH HOH . D 4 HOH A 14 215 215 HOH HOH . D 4 HOH A 15 216 216 HOH HOH . D 4 HOH A 16 217 217 HOH HOH . D 4 HOH A 17 218 218 HOH HOH . D 4 HOH A 18 219 219 HOH HOH . D 4 HOH A 19 220 220 HOH HOH . D 4 HOH A 20 221 221 HOH HOH . D 4 HOH A 21 222 222 HOH HOH . D 4 HOH A 22 223 223 HOH HOH . D 4 HOH A 23 224 224 HOH HOH . D 4 HOH A 24 226 226 HOH HOH . D 4 HOH A 25 227 227 HOH HOH . D 4 HOH A 26 228 228 HOH HOH . D 4 HOH A 27 229 229 HOH HOH . D 4 HOH A 28 230 230 HOH HOH . D 4 HOH A 29 231 231 HOH HOH . D 4 HOH A 30 232 232 HOH HOH . D 4 HOH A 31 233 233 HOH HOH . D 4 HOH A 32 234 234 HOH HOH . D 4 HOH A 33 235 235 HOH HOH . D 4 HOH A 34 236 236 HOH HOH . D 4 HOH A 35 237 237 HOH HOH . D 4 HOH A 36 238 238 HOH HOH . D 4 HOH A 37 239 239 HOH HOH . D 4 HOH A 38 240 240 HOH HOH . D 4 HOH A 39 241 241 HOH HOH . D 4 HOH A 40 242 242 HOH HOH . D 4 HOH A 41 243 243 HOH HOH . D 4 HOH A 42 244 244 HOH HOH . D 4 HOH A 43 245 245 HOH HOH . D 4 HOH A 44 246 246 HOH HOH . D 4 HOH A 45 247 247 HOH HOH . D 4 HOH A 46 248 248 HOH HOH . D 4 HOH A 47 249 249 HOH HOH . D 4 HOH A 48 250 250 HOH HOH . D 4 HOH A 49 251 251 HOH HOH . D 4 HOH A 50 252 252 HOH HOH . D 4 HOH A 51 253 253 HOH HOH . D 4 HOH A 52 254 254 HOH HOH . D 4 HOH A 53 255 255 HOH HOH . D 4 HOH A 54 256 256 HOH HOH . D 4 HOH A 55 257 257 HOH HOH . D 4 HOH A 56 258 258 HOH HOH . D 4 HOH A 57 259 259 HOH HOH . D 4 HOH A 58 260 260 HOH HOH . D 4 HOH A 59 261 261 HOH HOH . D 4 HOH A 60 262 262 HOH HOH . D 4 HOH A 61 263 263 HOH HOH . D 4 HOH A 62 264 264 HOH HOH . D 4 HOH A 63 265 265 HOH HOH . D 4 HOH A 64 266 266 HOH HOH . D 4 HOH A 65 267 267 HOH HOH . D 4 HOH A 66 268 268 HOH HOH . D 4 HOH A 67 269 269 HOH HOH . D 4 HOH A 68 270 270 HOH HOH . D 4 HOH A 69 271 271 HOH HOH . D 4 HOH A 70 272 272 HOH HOH . D 4 HOH A 71 273 273 HOH HOH . D 4 HOH A 72 274 274 HOH HOH . D 4 HOH A 73 275 275 HOH HOH . D 4 HOH A 74 277 277 HOH HOH . D 4 HOH A 75 278 278 HOH HOH . D 4 HOH A 76 279 279 HOH HOH . D 4 HOH A 77 280 280 HOH HOH . D 4 HOH A 78 281 281 HOH HOH . D 4 HOH A 79 282 282 HOH HOH . D 4 HOH A 80 283 283 HOH HOH . D 4 HOH A 81 284 284 HOH HOH . D 4 HOH A 82 285 285 HOH HOH . D 4 HOH A 83 286 286 HOH HOH . D 4 HOH A 84 287 287 HOH HOH . D 4 HOH A 85 288 288 HOH HOH . D 4 HOH A 86 289 289 HOH HOH . D 4 HOH A 87 290 290 HOH HOH . D 4 HOH A 88 291 291 HOH HOH . D 4 HOH A 89 292 292 HOH HOH . D 4 HOH A 90 293 293 HOH HOH . D 4 HOH A 91 294 294 HOH HOH . D 4 HOH A 92 295 295 HOH HOH . D 4 HOH A 93 296 296 HOH HOH . D 4 HOH A 94 297 297 HOH HOH . D 4 HOH A 95 298 298 HOH HOH . D 4 HOH A 96 299 299 HOH HOH . D 4 HOH A 97 300 300 HOH HOH . D 4 HOH A 98 301 301 HOH HOH . D 4 HOH A 99 302 302 HOH HOH . D 4 HOH A 100 303 303 HOH HOH . D 4 HOH A 101 304 304 HOH HOH . D 4 HOH A 102 305 305 HOH HOH . D 4 HOH A 103 306 306 HOH HOH . D 4 HOH A 104 307 307 HOH HOH . D 4 HOH A 105 308 308 HOH HOH . D 4 HOH A 106 309 309 HOH HOH . D 4 HOH A 107 310 310 HOH HOH . D 4 HOH A 108 311 311 HOH HOH . D 4 HOH A 109 312 312 HOH HOH . D 4 HOH A 110 313 313 HOH HOH . D 4 HOH A 111 314 314 HOH HOH . D 4 HOH A 112 315 315 HOH HOH . D 4 HOH A 113 316 316 HOH HOH . D 4 HOH A 114 317 317 HOH HOH . D 4 HOH A 115 318 318 HOH HOH . D 4 HOH A 116 319 319 HOH HOH . D 4 HOH A 117 320 320 HOH HOH . D 4 HOH A 118 321 321 HOH HOH . D 4 HOH A 119 322 322 HOH HOH . D 4 HOH A 120 323 323 HOH HOH . D 4 HOH A 121 324 324 HOH HOH . D 4 HOH A 122 325 325 HOH HOH . D 4 HOH A 123 326 326 HOH HOH . D 4 HOH A 124 328 328 HOH HOH . D 4 HOH A 125 329 329 HOH HOH . D 4 HOH A 126 330 330 HOH HOH . D 4 HOH A 127 331 331 HOH HOH . D 4 HOH A 128 332 332 HOH HOH . D 4 HOH A 129 334 334 HOH HOH . D 4 HOH A 130 335 335 HOH HOH . D 4 HOH A 131 336 336 HOH HOH . D 4 HOH A 132 338 338 HOH HOH . D 4 HOH A 133 339 339 HOH HOH . D 4 HOH A 134 340 340 HOH HOH . D 4 HOH A 135 342 342 HOH HOH . D 4 HOH A 136 343 343 HOH HOH . D 4 HOH A 137 344 344 HOH HOH . D 4 HOH A 138 345 345 HOH HOH . D 4 HOH A 139 346 346 HOH HOH . D 4 HOH A 140 347 347 HOH HOH . D 4 HOH A 141 348 348 HOH HOH . D 4 HOH A 142 351 351 HOH HOH . D 4 HOH A 143 354 354 HOH HOH . D 4 HOH A 144 355 355 HOH HOH . D 4 HOH A 145 357 357 HOH HOH . D 4 HOH A 146 358 358 HOH HOH . D 4 HOH A 147 360 360 HOH HOH . D 4 HOH A 148 361 361 HOH HOH . D 4 HOH A 149 363 363 HOH HOH . D 4 HOH A 150 365 365 HOH HOH . D 4 HOH A 151 366 366 HOH HOH . D 4 HOH A 152 367 367 HOH HOH . D 4 HOH A 153 368 368 HOH HOH . D 4 HOH A 154 369 369 HOH HOH . D 4 HOH A 155 370 370 HOH HOH . D 4 HOH A 156 371 371 HOH HOH . D 4 HOH A 157 372 372 HOH HOH . D 4 HOH A 158 373 373 HOH HOH . D 4 HOH A 159 374 374 HOH HOH . D 4 HOH A 160 375 375 HOH HOH . D 4 HOH A 161 376 376 HOH HOH . D 4 HOH A 162 377 377 HOH HOH . D 4 HOH A 163 379 379 HOH HOH . D 4 HOH A 164 381 381 HOH HOH . D 4 HOH A 165 383 383 HOH HOH . D 4 HOH A 166 384 384 HOH HOH . D 4 HOH A 167 385 385 HOH HOH . D 4 HOH A 168 392 392 HOH HOH . D 4 HOH A 169 393 393 HOH HOH . D 4 HOH A 170 395 395 HOH HOH . D 4 HOH A 171 396 396 HOH HOH . D 4 HOH A 172 397 397 HOH HOH . D 4 HOH A 173 398 398 HOH HOH . D 4 HOH A 174 399 399 HOH HOH . D 4 HOH A 175 400 400 HOH HOH . D 4 HOH A 176 403 403 HOH HOH . D 4 HOH A 177 404 404 HOH HOH . D 4 HOH A 178 405 405 HOH HOH . D 4 HOH A 179 406 406 HOH HOH . D 4 HOH A 180 407 407 HOH HOH . D 4 HOH A 181 408 408 HOH HOH . D 4 HOH A 182 409 409 HOH HOH . D 4 HOH A 183 410 410 HOH HOH . D 4 HOH A 184 411 411 HOH HOH . D 4 HOH A 185 412 412 HOH HOH . D 4 HOH A 186 413 413 HOH HOH . D 4 HOH A 187 414 414 HOH HOH . D 4 HOH A 188 415 415 HOH HOH . D 4 HOH A 189 416 416 HOH HOH . D 4 HOH A 190 417 417 HOH HOH . D 4 HOH A 191 418 418 HOH HOH . D 4 HOH A 192 419 419 HOH HOH . D 4 HOH A 193 420 420 HOH HOH . D 4 HOH A 194 421 421 HOH HOH . D 4 HOH A 195 422 422 HOH HOH . D 4 HOH A 196 423 423 HOH HOH . D 4 HOH A 197 424 424 HOH HOH . D 4 HOH A 198 425 425 HOH HOH . D 4 HOH A 199 426 426 HOH HOH . D 4 HOH A 200 427 427 HOH HOH . D 4 HOH A 201 428 428 HOH HOH . D 4 HOH A 202 429 429 HOH HOH . D 4 HOH A 203 430 430 HOH HOH . D 4 HOH A 204 431 431 HOH HOH . D 4 HOH A 205 432 432 HOH HOH . D 4 HOH A 206 433 433 HOH HOH . D 4 HOH A 207 434 434 HOH HOH . D 4 HOH A 208 435 435 HOH HOH . D 4 HOH A 209 436 436 HOH HOH . D 4 HOH A 210 437 437 HOH HOH . D 4 HOH A 211 438 438 HOH HOH . D 4 HOH A 212 440 440 HOH HOH . D 4 HOH A 213 441 441 HOH HOH . D 4 HOH A 214 451 451 HOH HOH . D 4 HOH A 215 452 452 HOH HOH . D 4 HOH A 216 453 453 HOH HOH . D 4 HOH A 217 456 456 HOH HOH . D 4 HOH A 218 457 457 HOH HOH . D 4 HOH A 219 458 458 HOH HOH . D 4 HOH A 220 460 460 HOH HOH . D 4 HOH A 221 461 461 HOH HOH . D 4 HOH A 222 462 462 HOH HOH . D 4 HOH A 223 465 465 HOH HOH . D 4 HOH A 224 466 466 HOH HOH . D 4 HOH A 225 468 468 HOH HOH . D 4 HOH A 226 469 469 HOH HOH . D 4 HOH A 227 471 471 HOH HOH . D 4 HOH A 228 472 472 HOH HOH . D 4 HOH A 229 476 476 HOH HOH . D 4 HOH A 230 477 477 HOH HOH . D 4 HOH A 231 478 478 HOH HOH . D 4 HOH A 232 482 482 HOH HOH . D 4 HOH A 233 486 486 HOH HOH . D 4 HOH A 234 488 488 HOH HOH . D 4 HOH A 235 489 489 HOH HOH . D 4 HOH A 236 495 495 HOH HOH . D 4 HOH A 237 496 496 HOH HOH . D 4 HOH A 238 506 506 HOH HOH . D 4 HOH A 239 507 507 HOH HOH . D 4 HOH A 240 508 508 HOH HOH . D 4 HOH A 241 509 509 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol N _atom_site.label_atom_id N _atom_site.label_comp_id NH4 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 11.411 _atom_site.Cartn_y 19.304 _atom_site.Cartn_z 34.792 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 7.68 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id N _atom_site.auth_comp_id NH4 _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 235 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #