data_1SY1 # _model_server_result.job_id d70RWI7SU-j3OTn6sJEhpQ _model_server_result.datetime_utc '2024-11-23 08:32:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1sy1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":186}' # _entry.id 1SY1 # _exptl.entry_id 1SY1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 30.006 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRIC OXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.31 _cell.angle_gamma 90 _cell.entry_id 1SY1 _cell.length_a 70.395 _cell.length_b 42.724 _cell.length_c 53.032 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SY1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 A CYS 2 1_555 A SG CYS 122 A CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? disulf ? disulf2 A SG CYS 41 A CYS 41 1_555 A SG CYS 171 A CYS 171 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 41 A CYS 41 1_555 A SG CYS 171 A CYS 171 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.929 ? metalc ? metalc1 A NE2 HIS 59 A HIS 59 1_555 C FE HEM . A HEM 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc2 C FE HEM . A HEM 185 1_555 D N NO . A NO 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.62 ? # _chem_comp.formula 'N O' _chem_comp.formula_weight 30.006 _chem_comp.id NO _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRIC OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Nitrogen monoxide' # _chem_comp_bond.atom_id_1 N _chem_comp_bond.atom_id_2 O _chem_comp_bond.comp_id NO _chem_comp_bond.value_order doub _chem_comp_bond.pdbx_ordinal 319 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 1SY1 _atom_sites.fract_transf_matrix[1][1] 0.014206 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00107 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023406 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01891 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 187 187 PO4 PO4 . C 3 HEM A 1 185 185 HEM HEM . D 4 NO A 1 186 186 NO NMO . E 5 HOH A 1 201 201 HOH HOH . E 5 HOH A 2 202 202 HOH HOH . E 5 HOH A 3 203 203 HOH HOH . E 5 HOH A 4 204 204 HOH HOH . E 5 HOH A 5 205 205 HOH HOH . E 5 HOH A 6 206 206 HOH HOH . E 5 HOH A 7 207 207 HOH HOH . E 5 HOH A 8 208 208 HOH HOH . E 5 HOH A 9 209 209 HOH HOH . E 5 HOH A 10 210 210 HOH HOH . E 5 HOH A 11 211 211 HOH HOH . E 5 HOH A 12 212 212 HOH HOH . E 5 HOH A 13 213 213 HOH HOH . E 5 HOH A 14 214 214 HOH HOH . E 5 HOH A 15 215 215 HOH HOH . E 5 HOH A 16 216 216 HOH HOH . E 5 HOH A 17 217 217 HOH HOH . E 5 HOH A 18 218 218 HOH HOH . E 5 HOH A 19 219 219 HOH HOH . E 5 HOH A 20 220 220 HOH HOH . E 5 HOH A 21 221 221 HOH HOH . E 5 HOH A 22 222 222 HOH HOH . E 5 HOH A 23 223 223 HOH HOH . E 5 HOH A 24 224 224 HOH HOH . E 5 HOH A 25 225 225 HOH HOH . E 5 HOH A 26 226 226 HOH HOH . E 5 HOH A 27 227 227 HOH HOH . E 5 HOH A 28 228 228 HOH HOH . E 5 HOH A 29 229 229 HOH HOH . E 5 HOH A 30 230 230 HOH HOH . E 5 HOH A 31 231 231 HOH HOH . E 5 HOH A 32 232 232 HOH HOH . E 5 HOH A 33 233 233 HOH HOH . E 5 HOH A 34 234 234 HOH HOH . E 5 HOH A 35 235 235 HOH HOH . E 5 HOH A 36 236 236 HOH HOH . E 5 HOH A 37 237 237 HOH HOH . E 5 HOH A 38 238 238 HOH HOH . E 5 HOH A 39 239 239 HOH HOH . E 5 HOH A 40 240 240 HOH HOH . E 5 HOH A 41 241 241 HOH HOH . E 5 HOH A 42 242 242 HOH HOH . E 5 HOH A 43 243 243 HOH HOH . E 5 HOH A 44 244 244 HOH HOH . E 5 HOH A 45 245 245 HOH HOH . E 5 HOH A 46 246 246 HOH HOH . E 5 HOH A 47 247 247 HOH HOH . E 5 HOH A 48 248 248 HOH HOH . E 5 HOH A 49 249 249 HOH HOH . E 5 HOH A 50 250 250 HOH HOH . E 5 HOH A 51 251 251 HOH HOH . E 5 HOH A 52 252 252 HOH HOH . E 5 HOH A 53 253 253 HOH HOH . E 5 HOH A 54 254 254 HOH HOH . E 5 HOH A 55 255 255 HOH HOH . E 5 HOH A 56 256 256 HOH HOH . E 5 HOH A 57 257 257 HOH HOH . E 5 HOH A 58 258 258 HOH HOH . E 5 HOH A 59 259 259 HOH HOH . E 5 HOH A 60 260 260 HOH HOH . E 5 HOH A 61 261 261 HOH HOH . E 5 HOH A 62 262 262 HOH HOH . E 5 HOH A 63 263 263 HOH HOH . E 5 HOH A 64 264 264 HOH HOH . E 5 HOH A 65 265 265 HOH HOH . E 5 HOH A 66 266 266 HOH HOH . E 5 HOH A 67 267 267 HOH HOH . E 5 HOH A 68 268 268 HOH HOH . E 5 HOH A 69 269 269 HOH HOH . E 5 HOH A 70 270 270 HOH HOH . E 5 HOH A 71 271 271 HOH HOH . E 5 HOH A 72 272 272 HOH HOH . E 5 HOH A 73 273 273 HOH HOH . E 5 HOH A 74 274 274 HOH HOH . E 5 HOH A 75 275 275 HOH HOH . E 5 HOH A 76 277 277 HOH HOH . E 5 HOH A 77 278 278 HOH HOH . E 5 HOH A 78 279 279 HOH HOH . E 5 HOH A 79 280 280 HOH HOH . E 5 HOH A 80 281 281 HOH HOH . E 5 HOH A 81 282 282 HOH HOH . E 5 HOH A 82 283 283 HOH HOH . E 5 HOH A 83 284 284 HOH HOH . E 5 HOH A 84 285 285 HOH HOH . E 5 HOH A 85 286 286 HOH HOH . E 5 HOH A 86 287 287 HOH HOH . E 5 HOH A 87 288 288 HOH HOH . E 5 HOH A 88 289 289 HOH HOH . E 5 HOH A 89 290 290 HOH HOH . E 5 HOH A 90 291 291 HOH HOH . E 5 HOH A 91 292 292 HOH HOH . E 5 HOH A 92 293 293 HOH HOH . E 5 HOH A 93 294 294 HOH HOH . E 5 HOH A 94 295 295 HOH HOH . E 5 HOH A 95 296 296 HOH HOH . E 5 HOH A 96 297 297 HOH HOH . E 5 HOH A 97 298 298 HOH HOH . E 5 HOH A 98 299 299 HOH HOH . E 5 HOH A 99 300 300 HOH HOH . E 5 HOH A 100 302 302 HOH HOH . E 5 HOH A 101 303 303 HOH HOH . E 5 HOH A 102 304 304 HOH HOH . E 5 HOH A 103 305 305 HOH HOH . E 5 HOH A 104 306 306 HOH HOH . E 5 HOH A 105 307 307 HOH HOH . E 5 HOH A 106 308 308 HOH HOH . E 5 HOH A 107 309 309 HOH HOH . E 5 HOH A 108 310 310 HOH HOH . E 5 HOH A 109 311 311 HOH HOH . E 5 HOH A 110 312 312 HOH HOH . E 5 HOH A 111 313 313 HOH HOH . E 5 HOH A 112 314 314 HOH HOH . E 5 HOH A 113 315 315 HOH HOH . E 5 HOH A 114 316 316 HOH HOH . E 5 HOH A 115 317 317 HOH HOH . E 5 HOH A 116 318 318 HOH HOH . E 5 HOH A 117 319 319 HOH HOH . E 5 HOH A 118 320 320 HOH HOH . E 5 HOH A 119 321 321 HOH HOH . E 5 HOH A 120 322 322 HOH HOH . E 5 HOH A 121 323 323 HOH HOH . E 5 HOH A 122 324 324 HOH HOH . E 5 HOH A 123 325 325 HOH HOH . E 5 HOH A 124 326 326 HOH HOH . E 5 HOH A 125 327 327 HOH HOH . E 5 HOH A 126 328 328 HOH HOH . E 5 HOH A 127 329 329 HOH HOH . E 5 HOH A 128 330 330 HOH HOH . E 5 HOH A 129 331 331 HOH HOH . E 5 HOH A 130 332 332 HOH HOH . E 5 HOH A 131 333 333 HOH HOH . E 5 HOH A 132 334 334 HOH HOH . E 5 HOH A 133 335 335 HOH HOH . E 5 HOH A 134 336 336 HOH HOH . E 5 HOH A 135 337 337 HOH HOH . E 5 HOH A 136 338 338 HOH HOH . E 5 HOH A 137 339 339 HOH HOH . E 5 HOH A 138 340 340 HOH HOH . E 5 HOH A 139 341 341 HOH HOH . E 5 HOH A 140 342 342 HOH HOH . E 5 HOH A 141 343 343 HOH HOH . E 5 HOH A 142 344 344 HOH HOH . E 5 HOH A 143 346 346 HOH HOH . E 5 HOH A 144 347 347 HOH HOH . E 5 HOH A 145 348 348 HOH HOH . E 5 HOH A 146 349 349 HOH HOH . E 5 HOH A 147 350 350 HOH HOH . E 5 HOH A 148 351 351 HOH HOH . E 5 HOH A 149 352 352 HOH HOH . E 5 HOH A 150 353 353 HOH HOH . E 5 HOH A 151 354 354 HOH HOH . E 5 HOH A 152 355 355 HOH HOH . E 5 HOH A 153 356 356 HOH HOH . E 5 HOH A 154 357 357 HOH HOH . E 5 HOH A 155 358 358 HOH HOH . E 5 HOH A 156 359 359 HOH HOH . E 5 HOH A 157 360 360 HOH HOH . E 5 HOH A 158 361 361 HOH HOH . E 5 HOH A 159 362 362 HOH HOH . E 5 HOH A 160 363 363 HOH HOH . E 5 HOH A 161 364 364 HOH HOH . E 5 HOH A 162 365 365 HOH HOH . E 5 HOH A 163 366 366 HOH HOH . E 5 HOH A 164 367 367 HOH HOH . E 5 HOH A 165 368 368 HOH HOH . E 5 HOH A 166 369 369 HOH HOH . E 5 HOH A 167 370 370 HOH HOH . E 5 HOH A 168 371 371 HOH HOH . E 5 HOH A 169 372 372 HOH HOH . E 5 HOH A 170 373 373 HOH HOH . E 5 HOH A 171 374 374 HOH HOH . E 5 HOH A 172 375 375 HOH HOH . E 5 HOH A 173 376 376 HOH HOH . E 5 HOH A 174 377 377 HOH HOH . E 5 HOH A 175 378 378 HOH HOH . E 5 HOH A 176 379 379 HOH HOH . E 5 HOH A 177 380 380 HOH HOH . E 5 HOH A 178 382 382 HOH HOH . E 5 HOH A 179 383 383 HOH HOH . E 5 HOH A 180 384 384 HOH HOH . E 5 HOH A 181 386 386 HOH HOH . E 5 HOH A 182 387 387 HOH HOH . E 5 HOH A 183 389 389 HOH HOH . E 5 HOH A 184 390 390 HOH HOH . E 5 HOH A 185 391 391 HOH HOH . E 5 HOH A 186 392 392 HOH HOH . E 5 HOH A 187 393 393 HOH HOH . E 5 HOH A 188 394 394 HOH HOH . E 5 HOH A 189 395 395 HOH HOH . E 5 HOH A 190 396 396 HOH HOH . E 5 HOH A 191 397 397 HOH HOH . E 5 HOH A 192 398 398 HOH HOH . E 5 HOH A 193 399 399 HOH HOH . E 5 HOH A 194 400 400 HOH HOH . E 5 HOH A 195 401 401 HOH HOH . E 5 HOH A 196 402 402 HOH HOH . E 5 HOH A 197 403 403 HOH HOH . E 5 HOH A 198 404 404 HOH HOH . E 5 HOH A 199 405 405 HOH HOH . E 5 HOH A 200 406 406 HOH HOH . E 5 HOH A 201 407 407 HOH HOH . E 5 HOH A 202 408 408 HOH HOH . E 5 HOH A 203 409 409 HOH HOH . E 5 HOH A 204 410 410 HOH HOH . E 5 HOH A 205 411 411 HOH HOH . E 5 HOH A 206 412 412 HOH HOH . E 5 HOH A 207 413 413 HOH HOH . E 5 HOH A 208 414 414 HOH HOH . E 5 HOH A 209 415 415 HOH HOH . E 5 HOH A 210 416 416 HOH HOH . E 5 HOH A 211 417 417 HOH HOH . E 5 HOH A 212 418 418 HOH HOH . E 5 HOH A 213 419 419 HOH HOH . E 5 HOH A 214 421 421 HOH HOH . E 5 HOH A 215 422 422 HOH HOH . E 5 HOH A 216 423 423 HOH HOH . E 5 HOH A 217 424 424 HOH HOH . E 5 HOH A 218 425 425 HOH HOH . E 5 HOH A 219 426 426 HOH HOH . E 5 HOH A 220 427 427 HOH HOH . E 5 HOH A 221 428 428 HOH HOH . E 5 HOH A 222 430 430 HOH HOH . E 5 HOH A 223 433 433 HOH HOH . E 5 HOH A 224 434 434 HOH HOH . E 5 HOH A 225 435 435 HOH HOH . E 5 HOH A 226 436 436 HOH HOH . E 5 HOH A 227 437 437 HOH HOH . E 5 HOH A 228 438 438 HOH HOH . E 5 HOH A 229 440 440 HOH HOH . E 5 HOH A 230 441 441 HOH HOH . E 5 HOH A 231 442 442 HOH HOH . E 5 HOH A 232 445 445 HOH HOH . E 5 HOH A 233 446 446 HOH HOH . E 5 HOH A 234 448 448 HOH HOH . E 5 HOH A 235 450 450 HOH HOH . E 5 HOH A 236 451 451 HOH HOH . E 5 HOH A 237 452 452 HOH HOH . E 5 HOH A 238 453 453 HOH HOH . E 5 HOH A 239 455 455 HOH HOH . E 5 HOH A 240 456 456 HOH HOH . E 5 HOH A 241 458 458 HOH HOH . E 5 HOH A 242 459 459 HOH HOH . E 5 HOH A 243 460 460 HOH HOH . E 5 HOH A 244 461 461 HOH HOH . E 5 HOH A 245 462 462 HOH HOH . E 5 HOH A 246 463 463 HOH HOH . E 5 HOH A 247 465 465 HOH HOH . E 5 HOH A 248 469 469 HOH HOH . E 5 HOH A 249 470 470 HOH HOH . E 5 HOH A 250 472 472 HOH HOH . E 5 HOH A 251 477 477 HOH HOH . E 5 HOH A 252 480 480 HOH HOH . E 5 HOH A 253 481 481 HOH HOH . E 5 HOH A 254 502 502 HOH HOH . E 5 HOH A 255 506 506 HOH HOH . E 5 HOH A 256 510 510 HOH HOH . E 5 HOH A 257 512 512 HOH HOH . E 5 HOH A 258 528 528 HOH HOH . E 5 HOH A 259 532 532 HOH HOH . E 5 HOH A 260 543 543 HOH HOH . E 5 HOH A 261 555 555 HOH HOH . E 5 HOH A 262 557 557 HOH HOH . E 5 HOH A 263 558 558 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO . . . D 4 10.469 19.446 35.182 1 4.93 ? N NO 186 A 1 HETATM 2 O O NO . . . D 4 9.899 18.878 34.172 1 8.69 ? O NO 186 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 2 #