data_1SZF
#
_model_server_result.job_id            cGwN9wsm31giyxtS_PVxkA 
_model_server_result.datetime_utc      '2024-11-27 22:16:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1szf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":9570}' 
#
_entry.id    1SZF 
#
_exptl.entry_id    1SZF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1SZF 
_cell.length_a            163.413 
_cell.length_b            163.413 
_cell.length_c            112.425 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1SZF 
_symmetry.cell_setting             trigonal 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 6_555 -x,-x+y,-z+2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 74.95 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 83 n n 
N1 C10 FMN doub 84 n n 
C2 O2 FMN doub 85 n n 
C2 N3 FMN sing 86 n n 
N3 C4 FMN sing 87 n n 
N3 HN3 FMN sing 88 n n 
C4 O4 FMN doub 89 n n 
C4 C4A FMN sing 90 n n 
C4A N5 FMN doub 91 n n 
C4A C10 FMN sing 92 n n 
N5 C5A FMN sing 93 n n 
C5A C6 FMN doub 94 n y 
C5A C9A FMN sing 95 n y 
C6 C7 FMN sing 96 n y 
C6 H6 FMN sing 97 n n 
C7 C7M FMN sing 98 n n 
C7 C8 FMN doub 99 n y 
C7M HM71 FMN sing 100 n n 
C7M HM72 FMN sing 101 n n 
C7M HM73 FMN sing 102 n n 
C8 C8M FMN sing 103 n n 
C8 C9 FMN sing 104 n y 
C8M HM81 FMN sing 105 n n 
C8M HM82 FMN sing 106 n n 
C8M HM83 FMN sing 107 n n 
C9 C9A FMN doub 108 n y 
C9 H9 FMN sing 109 n n 
C9A N10 FMN sing 110 n n 
N10 C10 FMN sing 111 n n 
N10 C1' FMN sing 112 n n 
C1' C2' FMN sing 113 n n 
C1' "H1'1" FMN sing 114 n n 
C1' "H1'2" FMN sing 115 n n 
C2' O2' FMN sing 116 n n 
C2' C3' FMN sing 117 n n 
C2' H2' FMN sing 118 n n 
O2' HO2' FMN sing 119 n n 
C3' O3' FMN sing 120 n n 
C3' C4' FMN sing 121 n n 
C3' H3' FMN sing 122 n n 
O3' HO3' FMN sing 123 n n 
C4' O4' FMN sing 124 n n 
C4' C5' FMN sing 125 n n 
C4' H4' FMN sing 126 n n 
O4' HO4' FMN sing 127 n n 
C5' O5' FMN sing 128 n n 
C5' "H5'1" FMN sing 129 n n 
C5' "H5'2" FMN sing 130 n n 
O5' P FMN sing 131 n n 
P O1P FMN doub 132 n n 
P O2P FMN sing 133 n n 
P O3P FMN sing 134 n n 
O2P HOP2 FMN sing 135 n n 
O3P HOP3 FMN sing 136 n n 
#
_atom_sites.entry_id                     1SZF 
_atom_sites.fract_transf_matrix[1][1]    0.006119 
_atom_sites.fract_transf_matrix[1][2]    0.003533 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007066 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008895 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FMN A 1 5570 5570 FMN FMN . 
D 3 PYR A 1 5580 5580 PYR PYR . 
E 2 FMN B 1 9570 9570 FMN FMN . 
F 3 PYR B 1 9580 9580 PYR PYR . 
G 4 HOH A 1 5581 5 HOH HOH . 
G 4 HOH A 2 5582 8 HOH HOH . 
G 4 HOH A 3 5583 10 HOH HOH . 
G 4 HOH A 4 5584 11 HOH HOH . 
G 4 HOH A 5 5585 14 HOH HOH . 
G 4 HOH A 6 5586 15 HOH HOH . 
G 4 HOH A 7 5587 18 HOH HOH . 
G 4 HOH A 8 5588 21 HOH HOH . 
G 4 HOH A 9 5589 22 HOH HOH . 
G 4 HOH A 10 5590 23 HOH HOH . 
G 4 HOH A 11 5591 25 HOH HOH . 
G 4 HOH A 12 5592 28 HOH HOH . 
G 4 HOH A 13 5593 29 HOH HOH . 
G 4 HOH A 14 5594 31 HOH HOH . 
G 4 HOH A 15 5595 33 HOH HOH . 
G 4 HOH A 16 5596 34 HOH HOH . 
G 4 HOH A 17 5597 35 HOH HOH . 
G 4 HOH A 18 5598 38 HOH HOH . 
G 4 HOH A 19 5599 42 HOH HOH . 
G 4 HOH A 20 5600 43 HOH HOH . 
G 4 HOH A 21 5601 48 HOH HOH . 
G 4 HOH A 22 5602 52 HOH HOH . 
G 4 HOH A 23 5603 55 HOH HOH . 
G 4 HOH A 24 5604 56 HOH HOH . 
G 4 HOH A 25 5605 57 HOH HOH . 
G 4 HOH A 26 5606 63 HOH HOH . 
G 4 HOH A 27 5607 64 HOH HOH . 
G 4 HOH A 28 5608 67 HOH HOH . 
G 4 HOH A 29 5609 68 HOH HOH . 
G 4 HOH A 30 5610 70 HOH HOH . 
G 4 HOH A 31 5611 75 HOH HOH . 
G 4 HOH A 32 5612 76 HOH HOH . 
G 4 HOH A 33 5613 79 HOH HOH . 
G 4 HOH A 34 5614 81 HOH HOH . 
G 4 HOH A 35 5615 82 HOH HOH . 
G 4 HOH A 36 5616 83 HOH HOH . 
G 4 HOH A 37 5617 84 HOH HOH . 
G 4 HOH A 38 5618 90 HOH HOH . 
G 4 HOH A 39 5619 92 HOH HOH . 
G 4 HOH A 40 5620 94 HOH HOH . 
G 4 HOH A 41 5621 95 HOH HOH . 
G 4 HOH A 42 5622 96 HOH HOH . 
G 4 HOH A 43 5623 97 HOH HOH . 
G 4 HOH A 44 5624 98 HOH HOH . 
G 4 HOH A 45 5625 100 HOH HOH . 
G 4 HOH A 46 5626 104 HOH HOH . 
G 4 HOH A 47 5627 112 HOH HOH . 
G 4 HOH A 48 5628 118 HOH HOH . 
G 4 HOH A 49 5629 121 HOH HOH . 
G 4 HOH A 50 5630 123 HOH HOH . 
G 4 HOH A 51 5631 124 HOH HOH . 
G 4 HOH A 52 5632 128 HOH HOH . 
G 4 HOH A 53 5633 130 HOH HOH . 
G 4 HOH A 54 5634 131 HOH HOH . 
G 4 HOH A 55 5635 140 HOH HOH . 
G 4 HOH A 56 5636 144 HOH HOH . 
G 4 HOH A 57 5637 148 HOH HOH . 
G 4 HOH A 58 5638 153 HOH HOH . 
G 4 HOH A 59 5639 155 HOH HOH . 
G 4 HOH A 60 5640 158 HOH HOH . 
G 4 HOH A 61 5641 160 HOH HOH . 
G 4 HOH A 62 5642 168 HOH HOH . 
G 4 HOH A 63 5643 169 HOH HOH . 
G 4 HOH A 64 5644 170 HOH HOH . 
G 4 HOH A 65 5645 172 HOH HOH . 
G 4 HOH A 66 5646 173 HOH HOH . 
G 4 HOH A 67 5647 174 HOH HOH . 
G 4 HOH A 68 5648 175 HOH HOH . 
G 4 HOH A 69 5649 177 HOH HOH . 
G 4 HOH A 70 5650 178 HOH HOH . 
G 4 HOH A 71 5651 184 HOH HOH . 
G 4 HOH A 72 5652 186 HOH HOH . 
G 4 HOH A 73 5653 191 HOH HOH . 
G 4 HOH A 74 5654 194 HOH HOH . 
G 4 HOH A 75 5655 195 HOH HOH . 
G 4 HOH A 76 5656 197 HOH HOH . 
G 4 HOH A 77 5657 199 HOH HOH . 
G 4 HOH A 78 5658 201 HOH HOH . 
G 4 HOH A 79 5659 207 HOH HOH . 
G 4 HOH A 80 5660 213 HOH HOH . 
G 4 HOH A 81 5661 220 HOH HOH . 
G 4 HOH A 82 5662 235 HOH HOH . 
G 4 HOH A 83 5663 236 HOH HOH . 
G 4 HOH A 84 5664 239 HOH HOH . 
G 4 HOH A 85 5665 241 HOH HOH . 
G 4 HOH A 86 5666 242 HOH HOH . 
G 4 HOH A 87 5667 264 HOH HOH . 
G 4 HOH A 88 5668 288 HOH HOH . 
G 4 HOH A 89 5669 304 HOH HOH . 
G 4 HOH A 90 5670 370 HOH HOH . 
G 4 HOH A 91 5671 434 HOH HOH . 
G 4 HOH A 92 5672 442 HOH HOH . 
G 4 HOH A 93 5673 444 HOH HOH . 
H 4 HOH B 1 9581 4 HOH HOH . 
H 4 HOH B 2 9582 6 HOH HOH . 
H 4 HOH B 3 9583 7 HOH HOH . 
H 4 HOH B 4 9584 9 HOH HOH . 
H 4 HOH B 5 9585 12 HOH HOH . 
H 4 HOH B 6 9586 16 HOH HOH . 
H 4 HOH B 7 9587 19 HOH HOH . 
H 4 HOH B 8 9588 27 HOH HOH . 
H 4 HOH B 9 9589 30 HOH HOH . 
H 4 HOH B 10 9590 32 HOH HOH . 
H 4 HOH B 11 9591 37 HOH HOH . 
H 4 HOH B 12 9592 41 HOH HOH . 
H 4 HOH B 13 9593 47 HOH HOH . 
H 4 HOH B 14 9594 51 HOH HOH . 
H 4 HOH B 15 9595 53 HOH HOH . 
H 4 HOH B 16 9596 54 HOH HOH . 
H 4 HOH B 17 9597 58 HOH HOH . 
H 4 HOH B 18 9598 62 HOH HOH . 
H 4 HOH B 19 9599 74 HOH HOH . 
H 4 HOH B 20 9600 78 HOH HOH . 
H 4 HOH B 21 9601 80 HOH HOH . 
H 4 HOH B 22 9602 86 HOH HOH . 
H 4 HOH B 23 9603 87 HOH HOH . 
H 4 HOH B 24 9604 89 HOH HOH . 
H 4 HOH B 25 9605 91 HOH HOH . 
H 4 HOH B 26 9606 102 HOH HOH . 
H 4 HOH B 27 9607 105 HOH HOH . 
H 4 HOH B 28 9608 109 HOH HOH . 
H 4 HOH B 29 9609 110 HOH HOH . 
H 4 HOH B 30 9610 113 HOH HOH . 
H 4 HOH B 31 9611 114 HOH HOH . 
H 4 HOH B 32 9612 115 HOH HOH . 
H 4 HOH B 33 9613 117 HOH HOH . 
H 4 HOH B 34 9614 120 HOH HOH . 
H 4 HOH B 35 9615 125 HOH HOH . 
H 4 HOH B 36 9616 127 HOH HOH . 
H 4 HOH B 37 9617 137 HOH HOH . 
H 4 HOH B 38 9618 138 HOH HOH . 
H 4 HOH B 39 9619 141 HOH HOH . 
H 4 HOH B 40 9620 145 HOH HOH . 
H 4 HOH B 41 9621 150 HOH HOH . 
H 4 HOH B 42 9622 157 HOH HOH . 
H 4 HOH B 43 9623 159 HOH HOH . 
H 4 HOH B 44 9624 162 HOH HOH . 
H 4 HOH B 45 9625 163 HOH HOH . 
H 4 HOH B 46 9626 164 HOH HOH . 
H 4 HOH B 47 9627 165 HOH HOH . 
H 4 HOH B 48 9628 167 HOH HOH . 
H 4 HOH B 49 9629 181 HOH HOH . 
H 4 HOH B 50 9630 185 HOH HOH . 
H 4 HOH B 51 9631 187 HOH HOH . 
H 4 HOH B 52 9632 189 HOH HOH . 
H 4 HOH B 53 9633 193 HOH HOH . 
H 4 HOH B 54 9634 200 HOH HOH . 
H 4 HOH B 55 9635 204 HOH HOH . 
H 4 HOH B 56 9636 210 HOH HOH . 
H 4 HOH B 57 9637 214 HOH HOH . 
H 4 HOH B 58 9638 221 HOH HOH . 
H 4 HOH B 59 9639 222 HOH HOH . 
H 4 HOH B 60 9640 232 HOH HOH . 
H 4 HOH B 61 9641 233 HOH HOH . 
H 4 HOH B 62 9642 234 HOH HOH . 
H 4 HOH B 63 9643 237 HOH HOH . 
H 4 HOH B 64 9644 252 HOH HOH . 
H 4 HOH B 65 9645 254 HOH HOH . 
H 4 HOH B 66 9646 256 HOH HOH . 
H 4 HOH B 67 9647 277 HOH HOH . 
H 4 HOH B 68 9648 281 HOH HOH . 
H 4 HOH B 69 9649 283 HOH HOH . 
H 4 HOH B 70 9650 307 HOH HOH . 
H 4 HOH B 71 9651 328 HOH HOH . 
H 4 HOH B 72 9652 353 HOH HOH . 
H 4 HOH B 73 9653 373 HOH HOH . 
H 4 HOH B 74 9654 379 HOH HOH . 
H 4 HOH B 75 9655 385 HOH HOH . 
H 4 HOH B 76 9656 398 HOH HOH . 
H 4 HOH B 77 9657 437 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . E 2 -38.428 69.671 68.75 1 46.72 ? N1 FMN 9570 B 1 
HETATM 2 C C2 FMN . . . E 2 -37.696 69.41 69.863 1 47.82 ? C2 FMN 9570 B 1 
HETATM 3 O O2 FMN . . . E 2 -37.08 68.405 70.13 1 47.97 ? O2 FMN 9570 B 1 
HETATM 4 N N3 FMN . . . E 2 -37.656 70.453 70.796 1 47.55 ? N3 FMN 9570 B 1 
HETATM 5 C C4 FMN . . . E 2 -38.253 71.662 70.715 1 48.3 ? C4 FMN 9570 B 1 
HETATM 6 O O4 FMN . . . E 2 -38.127 72.469 71.614 1 51.14 ? O4 FMN 9570 B 1 
HETATM 7 C C4A FMN . . . E 2 -39.032 71.892 69.487 1 46.51 ? C4A FMN 9570 B 1 
HETATM 8 N N5 FMN . . . E 2 -39.659 73.039 69.288 1 44.26 ? N5 FMN 9570 B 1 
HETATM 9 C C5A FMN . . . E 2 -40.392 73.257 68.154 1 41.71 ? C5A FMN 9570 B 1 
HETATM 10 C C6 FMN . . . E 2 -41.082 74.448 67.9 1 39.76 ? C6 FMN 9570 B 1 
HETATM 11 C C7 FMN . . . E 2 -41.821 74.68 66.775 1 39.43 ? C7 FMN 9570 B 1 
HETATM 12 C C7M FMN . . . E 2 -42.628 75.939 66.568 1 39.47 ? C7M FMN 9570 B 1 
HETATM 13 C C8 FMN . . . E 2 -41.879 73.633 65.815 1 39.95 ? C8 FMN 9570 B 1 
HETATM 14 C C8M FMN . . . E 2 -42.649 73.735 64.508 1 40.82 ? C8M FMN 9570 B 1 
HETATM 15 C C9 FMN . . . E 2 -41.216 72.443 66.025 1 40.34 ? C9 FMN 9570 B 1 
HETATM 16 C C9A FMN . . . E 2 -40.466 72.216 67.17 1 41.99 ? C9A FMN 9570 B 1 
HETATM 17 N N10 FMN . . . E 2 -39.804 71.049 67.417 1 45.03 ? N10 FMN 9570 B 1 
HETATM 18 C C10 FMN . . . E 2 -39.052 70.802 68.558 1 45.99 ? C10 FMN 9570 B 1 
HETATM 19 C C1' FMN . . . E 2 -39.875 70.003 66.393 1 45.5 ? C1' FMN 9570 B 1 
HETATM 20 C C2' FMN . . . E 2 -40.747 68.777 66.57 1 44.43 ? C2' FMN 9570 B 1 
HETATM 21 O O2' FMN . . . E 2 -40.904 68.135 67.83 1 44.33 ? O2' FMN 9570 B 1 
HETATM 22 C C3' FMN . . . E 2 -41.015 67.996 65.299 1 43.69 ? C3' FMN 9570 B 1 
HETATM 23 O O3' FMN . . . E 2 -39.749 67.287 65.274 1 43.63 ? O3' FMN 9570 B 1 
HETATM 24 C C4' FMN . . . E 2 -41.47 68.686 64.031 1 42.12 ? C4' FMN 9570 B 1 
HETATM 25 O O4' FMN . . . E 2 -42.419 69.691 64.308 1 39.74 ? O4' FMN 9570 B 1 
HETATM 26 C C5' FMN . . . E 2 -41.85 67.582 63.07 1 42.34 ? C5' FMN 9570 B 1 
HETATM 27 O O5' FMN . . . E 2 -42.246 68.283 61.93 1 43.08 ? O5' FMN 9570 B 1 
HETATM 28 P P FMN . . . E 2 -43.604 68.87 61.357 1 44.33 ? P FMN 9570 B 1 
HETATM 29 O O1P FMN . . . E 2 -43.503 69.097 59.864 1 44.2 ? O1P FMN 9570 B 1 
HETATM 30 O O2P FMN . . . E 2 -43.852 70.202 62.041 1 44.2 ? O2P FMN 9570 B 1 
HETATM 31 O O3P FMN . . . E 2 -44.691 67.902 61.767 1 43.37 ? O3P FMN 9570 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           231 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           31 
#