data_1T13 # _model_server_result.job_id 6aeOWAoWPLWZYxJOfNHRgg _model_server_result.datetime_utc '2024-11-25 14:01:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1t13 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":193}' # _entry.id 1T13 # _exptl.entry_id 1T13 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1T13 _cell.length_a 126.321 _cell.length_b 126.321 _cell.length_c 165.669 _cell.Z_PDB 30 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T13 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_765 -x+2,-x+y+1,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 189.4815 109.397195 55.223 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 H N N ? 2 J N N ? 2 L N N ? 2 N N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 295 n n P O2 PO4 sing 296 n n P O3 PO4 sing 297 n n P O4 PO4 sing 298 n n # _atom_sites.entry_id 1T13 _atom_sites.fract_transf_matrix[1][1] 0.007916 _atom_sites.fract_transf_matrix[1][2] 0.004571 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009141 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006036 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 PO4 A 1 190 190 PO4 PO4 . G 3 INI A 1 203 203 INI INI . H 2 PO4 B 1 191 191 PO4 PO4 . I 3 INI B 1 205 205 INI INI . J 2 PO4 C 1 192 192 PO4 PO4 . K 3 INI C 1 202 202 INI INI . L 2 PO4 D 1 193 193 PO4 PO4 . M 3 INI D 1 204 204 INI INI . N 2 PO4 E 1 194 194 PO4 PO4 . O 3 INI E 1 201 201 INI INI . P 4 HOH A 1 2006 2006 HOH HOH . P 4 HOH A 2 2020 2020 HOH HOH . P 4 HOH A 3 2023 2023 HOH HOH . P 4 HOH A 4 2025 2025 HOH HOH . P 4 HOH A 5 2026 2026 HOH HOH . P 4 HOH A 6 2027 2027 HOH HOH . P 4 HOH A 7 2036 2036 HOH HOH . P 4 HOH A 8 2038 2038 HOH HOH . P 4 HOH A 9 2040 2040 HOH HOH . P 4 HOH A 10 2044 2044 HOH HOH . P 4 HOH A 11 2049 2049 HOH HOH . P 4 HOH A 12 2050 2050 HOH HOH . P 4 HOH A 13 2119 2119 HOH HOH . P 4 HOH A 14 2135 2135 HOH HOH . P 4 HOH A 15 2145 2145 HOH HOH . P 4 HOH A 16 2146 2146 HOH HOH . P 4 HOH A 17 2147 2147 HOH HOH . P 4 HOH A 18 2148 2148 HOH HOH . P 4 HOH A 19 2149 2149 HOH HOH . P 4 HOH A 20 2150 2150 HOH HOH . P 4 HOH A 21 2151 2151 HOH HOH . P 4 HOH A 22 2178 2178 HOH HOH . Q 4 HOH B 1 2015 2015 HOH HOH . Q 4 HOH B 2 2021 2021 HOH HOH . Q 4 HOH B 3 2045 2045 HOH HOH . Q 4 HOH B 4 2052 2052 HOH HOH . Q 4 HOH B 5 2054 2054 HOH HOH . Q 4 HOH B 6 2056 2056 HOH HOH . Q 4 HOH B 7 2059 2059 HOH HOH . Q 4 HOH B 8 2062 2062 HOH HOH . Q 4 HOH B 9 2152 2152 HOH HOH . Q 4 HOH B 10 2153 2153 HOH HOH . Q 4 HOH B 11 2154 2154 HOH HOH . Q 4 HOH B 12 2155 2155 HOH HOH . Q 4 HOH B 13 2156 2156 HOH HOH . Q 4 HOH B 14 2157 2157 HOH HOH . Q 4 HOH B 15 2158 2158 HOH HOH . Q 4 HOH B 16 2159 2159 HOH HOH . Q 4 HOH B 17 2160 2160 HOH HOH . Q 4 HOH B 18 2161 2161 HOH HOH . R 4 HOH C 1 2064 2064 HOH HOH . R 4 HOH C 2 2065 2065 HOH HOH . R 4 HOH C 3 2071 2071 HOH HOH . R 4 HOH C 4 2075 2075 HOH HOH . R 4 HOH C 5 2087 2087 HOH HOH . R 4 HOH C 6 2088 2088 HOH HOH . R 4 HOH C 7 2089 2089 HOH HOH . R 4 HOH C 8 2090 2090 HOH HOH . R 4 HOH C 9 2162 2162 HOH HOH . R 4 HOH C 10 2163 2163 HOH HOH . R 4 HOH C 11 2165 2165 HOH HOH . R 4 HOH C 12 2166 2166 HOH HOH . R 4 HOH C 13 2167 2167 HOH HOH . S 4 HOH D 1 2079 2079 HOH HOH . S 4 HOH D 2 2080 2080 HOH HOH . S 4 HOH D 3 2082 2082 HOH HOH . S 4 HOH D 4 2083 2083 HOH HOH . S 4 HOH D 5 2094 2094 HOH HOH . S 4 HOH D 6 2097 2097 HOH HOH . S 4 HOH D 7 2105 2105 HOH HOH . S 4 HOH D 8 2107 2107 HOH HOH . S 4 HOH D 9 2109 2109 HOH HOH . S 4 HOH D 10 2120 2120 HOH HOH . S 4 HOH D 11 2164 2164 HOH HOH . S 4 HOH D 12 2168 2168 HOH HOH . S 4 HOH D 13 2170 2170 HOH HOH . S 4 HOH D 14 2171 2171 HOH HOH . S 4 HOH D 15 2172 2172 HOH HOH . S 4 HOH D 16 2173 2173 HOH HOH . T 4 HOH E 1 2030 2030 HOH HOH . T 4 HOH E 2 2041 2041 HOH HOH . T 4 HOH E 3 2078 2078 HOH HOH . T 4 HOH E 4 2101 2101 HOH HOH . T 4 HOH E 5 2110 2110 HOH HOH . T 4 HOH E 6 2111 2111 HOH HOH . T 4 HOH E 7 2112 2112 HOH HOH . T 4 HOH E 8 2122 2122 HOH HOH . T 4 HOH E 9 2123 2123 HOH HOH . T 4 HOH E 10 2127 2127 HOH HOH . T 4 HOH E 11 2128 2128 HOH HOH . T 4 HOH E 12 2131 2131 HOH HOH . T 4 HOH E 13 2144 2144 HOH HOH . T 4 HOH E 14 2169 2169 HOH HOH . T 4 HOH E 15 2174 2174 HOH HOH . T 4 HOH E 16 2175 2175 HOH HOH . T 4 HOH E 17 2176 2176 HOH HOH . T 4 HOH E 18 2177 2177 HOH HOH . T 4 HOH E 19 2179 2179 HOH HOH . T 4 HOH E 20 2180 2180 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . L 2 74.525 77.642 20.524 0.5 100.75 ? P PO4 193 D 1 HETATM 2 O O1 PO4 . . . L 2 74.4 77.612 19.047 0.5 101.46 ? O1 PO4 193 D 1 HETATM 3 O O2 PO4 . . . L 2 74.306 79.026 21.008 0.5 100.47 ? O2 PO4 193 D 1 HETATM 4 O O3 PO4 . . . L 2 75.88 77.187 20.921 0.5 100.65 ? O3 PO4 193 D 1 HETATM 5 O O4 PO4 . . . L 2 73.513 76.743 21.118 0.5 101.71 ? O4 PO4 193 D 1 # _model_server_stats.io_time_ms 97 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #