data_1T16 # _model_server_result.job_id 7DvwlklHxeuwTAjAYvAzYw _model_server_result.datetime_utc '2024-12-21 16:36:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1t16 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":432}' # _entry.id 1T16 # _exptl.entry_id 1T16 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 229.402 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LAURYL DIMETHYLAMINE-N-OXIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.37 _cell.angle_gamma 90 _cell.entry_id 1T16 _cell.length_a 100.38 _cell.length_b 68.664 _cell.length_c 106.024 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T16 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,P 1 1 B,I,J,K,L,M,N,O,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 L N N ? 3 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 423 A HIS 423 1_555 C CU CU . A CU 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc2 A ND1 HIS 424 A HIS 424 1_555 D CU CU . A CU 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? metalc ? metalc3 A NE2 HIS 425 A HIS 425 1_555 E CU CU . A CU 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc4 A NE2 HIS 426 A HIS 426 1_555 C CU CU . A CU 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc5 A NE2 HIS 427 A HIS 427 1_555 E CU CU . A CU 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? metalc ? metalc6 D CU CU . A CU 429 1_555 P O HOH . A HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc7 B NE2 HIS 424 B HIS 424 1_555 J CU CU . B CU 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc8 B NE2 HIS 425 B HIS 425 1_555 K CU CU . B CU 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? # _chem_comp.formula 'C14 H31 N O' _chem_comp.formula_weight 229.402 _chem_comp.id LDA _chem_comp.mon_nstd_flag . _chem_comp.name 'LAURYL DIMETHYLAMINE-N-OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 O1 LDA sing 214 n n N1 CM1 LDA sing 215 n n N1 CM2 LDA sing 216 n n N1 C1 LDA sing 217 n n CM1 HM11 LDA sing 218 n n CM1 HM12 LDA sing 219 n n CM1 HM13 LDA sing 220 n n CM2 HM21 LDA sing 221 n n CM2 HM22 LDA sing 222 n n CM2 HM23 LDA sing 223 n n C1 C2 LDA sing 224 n n C1 H11 LDA sing 225 n n C1 H12 LDA sing 226 n n C2 C3 LDA sing 227 n n C2 H21 LDA sing 228 n n C2 H22 LDA sing 229 n n C3 C4 LDA sing 230 n n C3 H31 LDA sing 231 n n C3 H32 LDA sing 232 n n C4 C5 LDA sing 233 n n C4 H41 LDA sing 234 n n C4 H42 LDA sing 235 n n C5 C6 LDA sing 236 n n C5 H51 LDA sing 237 n n C5 H52 LDA sing 238 n n C6 C7 LDA sing 239 n n C6 H61 LDA sing 240 n n C6 H62 LDA sing 241 n n C7 C8 LDA sing 242 n n C7 H71 LDA sing 243 n n C7 H72 LDA sing 244 n n C8 C9 LDA sing 245 n n C8 H81 LDA sing 246 n n C8 H82 LDA sing 247 n n C9 C10 LDA sing 248 n n C9 H91 LDA sing 249 n n C9 H92 LDA sing 250 n n C10 C11 LDA sing 251 n n C10 H101 LDA sing 252 n n C10 H102 LDA sing 253 n n C11 C12 LDA sing 254 n n C11 H111 LDA sing 255 n n C11 H112 LDA sing 256 n n C12 H121 LDA sing 257 n n C12 H122 LDA sing 258 n n C12 H123 LDA sing 259 n n # _atom_sites.entry_id 1T16 _atom_sites.fract_transf_matrix[1][1] 0.009962 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001112 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014564 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00949 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CU A 1 428 202 CU CU . D 2 CU A 1 429 203 CU CU . E 2 CU A 1 430 204 CU CU . F 3 LDA A 1 431 301 LDA LDA . G 3 LDA A 1 432 303 LDA LDA . H 4 C8E A 1 433 407 C8E C8E . I 2 CU B 1 428 201 CU CU . J 2 CU B 1 429 205 CU CU . K 2 CU B 1 430 206 CU CU . L 3 LDA B 1 431 302 LDA LDA . M 3 LDA B 1 432 304 LDA LDA . N 4 C8E B 1 433 405 C8E C8E . O 4 C8E B 1 434 406 C8E C8E . P 5 HOH A 1 434 1 HOH HOH . P 5 HOH A 2 435 3 HOH HOH . P 5 HOH A 3 436 5 HOH HOH . P 5 HOH A 4 437 6 HOH HOH . P 5 HOH A 5 438 7 HOH HOH . P 5 HOH A 6 439 8 HOH HOH . P 5 HOH A 7 440 9 HOH HOH . P 5 HOH A 8 441 10 HOH HOH . P 5 HOH A 9 442 11 HOH HOH . P 5 HOH A 10 443 15 HOH HOH . P 5 HOH A 11 444 16 HOH HOH . P 5 HOH A 12 445 17 HOH HOH . P 5 HOH A 13 446 19 HOH HOH . P 5 HOH A 14 447 21 HOH HOH . P 5 HOH A 15 448 22 HOH HOH . P 5 HOH A 16 449 25 HOH HOH . P 5 HOH A 17 450 29 HOH HOH . P 5 HOH A 18 451 30 HOH HOH . P 5 HOH A 19 452 33 HOH HOH . P 5 HOH A 20 453 34 HOH HOH . P 5 HOH A 21 454 38 HOH HOH . P 5 HOH A 22 455 39 HOH HOH . P 5 HOH A 23 456 40 HOH HOH . P 5 HOH A 24 457 43 HOH HOH . P 5 HOH A 25 458 45 HOH HOH . P 5 HOH A 26 459 46 HOH HOH . P 5 HOH A 27 460 47 HOH HOH . P 5 HOH A 28 461 48 HOH HOH . P 5 HOH A 29 462 50 HOH HOH . P 5 HOH A 30 463 51 HOH HOH . P 5 HOH A 31 464 53 HOH HOH . P 5 HOH A 32 465 54 HOH HOH . P 5 HOH A 33 466 56 HOH HOH . P 5 HOH A 34 467 57 HOH HOH . P 5 HOH A 35 468 60 HOH HOH . P 5 HOH A 36 469 63 HOH HOH . P 5 HOH A 37 470 64 HOH HOH . P 5 HOH A 38 471 66 HOH HOH . P 5 HOH A 39 472 67 HOH HOH . P 5 HOH A 40 473 68 HOH HOH . P 5 HOH A 41 474 71 HOH HOH . P 5 HOH A 42 475 72 HOH HOH . P 5 HOH A 43 476 73 HOH HOH . P 5 HOH A 44 477 76 HOH HOH . P 5 HOH A 45 478 77 HOH HOH . P 5 HOH A 46 479 78 HOH HOH . P 5 HOH A 47 480 79 HOH HOH . P 5 HOH A 48 481 80 HOH HOH . P 5 HOH A 49 482 81 HOH HOH . P 5 HOH A 50 483 82 HOH HOH . P 5 HOH A 51 484 85 HOH HOH . P 5 HOH A 52 485 88 HOH HOH . P 5 HOH A 53 486 89 HOH HOH . P 5 HOH A 54 487 90 HOH HOH . P 5 HOH A 55 488 91 HOH HOH . P 5 HOH A 56 489 92 HOH HOH . P 5 HOH A 57 490 95 HOH HOH . P 5 HOH A 58 491 96 HOH HOH . P 5 HOH A 59 492 98 HOH HOH . P 5 HOH A 60 493 99 HOH HOH . P 5 HOH A 61 494 100 HOH HOH . P 5 HOH A 62 495 103 HOH HOH . P 5 HOH A 63 496 106 HOH HOH . P 5 HOH A 64 497 107 HOH HOH . P 5 HOH A 65 498 108 HOH HOH . P 5 HOH A 66 499 109 HOH HOH . P 5 HOH A 67 500 110 HOH HOH . P 5 HOH A 68 501 111 HOH HOH . P 5 HOH A 69 502 112 HOH HOH . P 5 HOH A 70 503 113 HOH HOH . P 5 HOH A 71 504 115 HOH HOH . P 5 HOH A 72 505 118 HOH HOH . P 5 HOH A 73 506 123 HOH HOH . P 5 HOH A 74 507 127 HOH HOH . P 5 HOH A 75 508 129 HOH HOH . P 5 HOH A 76 509 131 HOH HOH . P 5 HOH A 77 510 132 HOH HOH . P 5 HOH A 78 511 134 HOH HOH . P 5 HOH A 79 512 136 HOH HOH . P 5 HOH A 80 513 140 HOH HOH . P 5 HOH A 81 514 142 HOH HOH . P 5 HOH A 82 515 145 HOH HOH . P 5 HOH A 83 516 146 HOH HOH . P 5 HOH A 84 517 148 HOH HOH . P 5 HOH A 85 518 150 HOH HOH . P 5 HOH A 86 519 152 HOH HOH . Q 5 HOH B 1 435 2 HOH HOH . Q 5 HOH B 2 436 4 HOH HOH . Q 5 HOH B 3 437 12 HOH HOH . Q 5 HOH B 4 438 13 HOH HOH . Q 5 HOH B 5 439 14 HOH HOH . Q 5 HOH B 6 440 18 HOH HOH . Q 5 HOH B 7 441 20 HOH HOH . Q 5 HOH B 8 442 23 HOH HOH . Q 5 HOH B 9 443 24 HOH HOH . Q 5 HOH B 10 444 26 HOH HOH . Q 5 HOH B 11 445 27 HOH HOH . Q 5 HOH B 12 446 28 HOH HOH . Q 5 HOH B 13 447 31 HOH HOH . Q 5 HOH B 14 448 35 HOH HOH . Q 5 HOH B 15 449 36 HOH HOH . Q 5 HOH B 16 450 37 HOH HOH . Q 5 HOH B 17 451 41 HOH HOH . Q 5 HOH B 18 452 42 HOH HOH . Q 5 HOH B 19 453 44 HOH HOH . Q 5 HOH B 20 454 49 HOH HOH . Q 5 HOH B 21 455 52 HOH HOH . Q 5 HOH B 22 456 55 HOH HOH . Q 5 HOH B 23 457 58 HOH HOH . Q 5 HOH B 24 458 59 HOH HOH . Q 5 HOH B 25 459 61 HOH HOH . Q 5 HOH B 26 460 62 HOH HOH . Q 5 HOH B 27 461 65 HOH HOH . Q 5 HOH B 28 462 69 HOH HOH . Q 5 HOH B 29 463 70 HOH HOH . Q 5 HOH B 30 464 74 HOH HOH . Q 5 HOH B 31 465 75 HOH HOH . Q 5 HOH B 32 466 83 HOH HOH . Q 5 HOH B 33 467 84 HOH HOH . Q 5 HOH B 34 468 86 HOH HOH . Q 5 HOH B 35 469 87 HOH HOH . Q 5 HOH B 36 470 93 HOH HOH . Q 5 HOH B 37 471 94 HOH HOH . Q 5 HOH B 38 472 97 HOH HOH . Q 5 HOH B 39 473 101 HOH HOH . Q 5 HOH B 40 474 102 HOH HOH . Q 5 HOH B 41 475 104 HOH HOH . Q 5 HOH B 42 476 105 HOH HOH . Q 5 HOH B 43 477 114 HOH HOH . Q 5 HOH B 44 478 116 HOH HOH . Q 5 HOH B 45 479 117 HOH HOH . Q 5 HOH B 46 480 119 HOH HOH . Q 5 HOH B 47 481 120 HOH HOH . Q 5 HOH B 48 482 121 HOH HOH . Q 5 HOH B 49 483 122 HOH HOH . Q 5 HOH B 50 484 125 HOH HOH . Q 5 HOH B 51 485 126 HOH HOH . Q 5 HOH B 52 486 128 HOH HOH . Q 5 HOH B 53 487 130 HOH HOH . Q 5 HOH B 54 488 133 HOH HOH . Q 5 HOH B 55 489 135 HOH HOH . Q 5 HOH B 56 490 137 HOH HOH . Q 5 HOH B 57 491 138 HOH HOH . Q 5 HOH B 58 492 139 HOH HOH . Q 5 HOH B 59 493 141 HOH HOH . Q 5 HOH B 60 494 143 HOH HOH . Q 5 HOH B 61 495 144 HOH HOH . Q 5 HOH B 62 496 147 HOH HOH . Q 5 HOH B 63 497 149 HOH HOH . Q 5 HOH B 64 498 151 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LDA . . . M 3 -4.25 48.141 89.058 1 86.85 ? N1 LDA 432 B 1 HETATM 2 O O1 LDA . . . M 3 -3.276 47.588 89.647 1 87.14 ? O1 LDA 432 B 1 HETATM 3 C CM1 LDA . . . M 3 -4.215 49.588 89.331 1 85.89 ? CM1 LDA 432 B 1 HETATM 4 C CM2 LDA . . . M 3 -4.153 48.115 87.631 1 86.81 ? CM2 LDA 432 B 1 HETATM 5 C C1 LDA . . . M 3 -5.599 47.752 89.597 1 85.12 ? C1 LDA 432 B 1 HETATM 6 C C2 LDA . . . M 3 -5.917 46.227 89.71 1 81.86 ? C2 LDA 432 B 1 HETATM 7 C C3 LDA . . . M 3 -7.453 46.035 89.481 1 80.51 ? C3 LDA 432 B 1 HETATM 8 C C4 LDA . . . M 3 -7.913 44.82 90.253 1 78.81 ? C4 LDA 432 B 1 HETATM 9 C C5 LDA . . . M 3 -8.362 43.698 89.345 1 77.79 ? C5 LDA 432 B 1 HETATM 10 C C6 LDA . . . M 3 -9.805 43.369 89.811 1 77.56 ? C6 LDA 432 B 1 HETATM 11 C C7 LDA . . . M 3 -10.344 42.222 88.944 1 76.67 ? C7 LDA 432 B 1 HETATM 12 C C8 LDA . . . M 3 -11.787 41.824 89.33 1 75.96 ? C8 LDA 432 B 1 HETATM 13 C C9 LDA . . . M 3 -12.509 41.92 87.99 1 75.81 ? C9 LDA 432 B 1 HETATM 14 C C10 LDA . . . M 3 -13.999 42.204 88.187 1 74.47 ? C10 LDA 432 B 1 HETATM 15 C C11 LDA . . . M 3 -14.622 42.152 86.794 1 72.69 ? C11 LDA 432 B 1 HETATM 16 C C12 LDA . . . M 3 -16.122 42.419 86.903 1 72.76 ? C12 LDA 432 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 16 #