data_1T2F # _model_server_result.job_id q5xz65JpmT-q6XVo_LE_Aw _model_server_result.datetime_utc '2024-11-23 21:06:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1t2f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":406}' # _entry.id 1T2F # _exptl.entry_id 1T2F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 130.059 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-HYDROXY-1,2,5-OXADIAZOLE-3-CARBOXYLIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1T2F _cell.length_a 137.397 _cell.length_b 160.443 _cell.length_c 59.366 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T2F _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C3 H2 N2 O4' _chem_comp.formula_weight 130.059 _chem_comp.id OXQ _chem_comp.mon_nstd_flag . _chem_comp.name '4-HYDROXY-1,2,5-OXADIAZOLE-3-CARBOXYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O9 C6 OXQ sing 312 n n O9 HO9 OXQ sing 313 n n C6 O8 OXQ doub 314 n n C6 C2 OXQ sing 315 n n C2 C1 OXQ sing 316 n y C2 N3 OXQ doub 317 n y C1 O7 OXQ sing 318 n n C1 N5 OXQ doub 319 n y O7 HO7 OXQ sing 320 n n N3 O4 OXQ sing 321 n y O4 N5 OXQ sing 322 n y # _atom_sites.entry_id 1T2F _atom_sites.fract_transf_matrix[1][1] 0.007278 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006233 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016845 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAD A 1 401 401 NAD NAD . F 3 OXQ A 1 402 402 OXQ OXQ . G 2 NAD B 1 403 403 NAD NAD . H 3 OXQ B 1 404 404 OXQ OXQ . I 2 NAD C 1 405 405 NAD NAD . J 3 OXQ C 1 406 406 OXQ OXQ . K 2 NAD D 1 407 407 NAD NAD . L 3 OXQ D 1 408 408 OXQ OXQ . M 4 HOH A 1 403 2 HOH HOH . M 4 HOH A 2 404 6 HOH HOH . M 4 HOH A 3 405 12 HOH HOH . M 4 HOH A 4 406 13 HOH HOH . M 4 HOH A 5 407 16 HOH HOH . M 4 HOH A 6 408 19 HOH HOH . M 4 HOH A 7 409 23 HOH HOH . M 4 HOH A 8 410 25 HOH HOH . M 4 HOH A 9 411 27 HOH HOH . M 4 HOH A 10 412 28 HOH HOH . M 4 HOH A 11 413 30 HOH HOH . M 4 HOH A 12 414 31 HOH HOH . M 4 HOH A 13 415 32 HOH HOH . M 4 HOH A 14 416 33 HOH HOH . M 4 HOH A 15 417 34 HOH HOH . M 4 HOH A 16 418 35 HOH HOH . M 4 HOH A 17 419 45 HOH HOH . M 4 HOH A 18 420 47 HOH HOH . M 4 HOH A 19 421 50 HOH HOH . M 4 HOH A 20 422 51 HOH HOH . M 4 HOH A 21 423 53 HOH HOH . M 4 HOH A 22 424 58 HOH HOH . M 4 HOH A 23 425 63 HOH HOH . M 4 HOH A 24 426 67 HOH HOH . M 4 HOH A 25 427 68 HOH HOH . M 4 HOH A 26 428 76 HOH HOH . M 4 HOH A 27 429 77 HOH HOH . M 4 HOH A 28 430 83 HOH HOH . M 4 HOH A 29 431 86 HOH HOH . M 4 HOH A 30 432 88 HOH HOH . M 4 HOH A 31 433 89 HOH HOH . M 4 HOH A 32 434 92 HOH HOH . M 4 HOH A 33 435 94 HOH HOH . M 4 HOH A 34 436 96 HOH HOH . M 4 HOH A 35 437 102 HOH HOH . M 4 HOH A 36 438 107 HOH HOH . M 4 HOH A 37 439 115 HOH HOH . M 4 HOH A 38 440 124 HOH HOH . M 4 HOH A 39 441 126 HOH HOH . M 4 HOH A 40 442 131 HOH HOH . M 4 HOH A 41 443 133 HOH HOH . M 4 HOH A 42 444 138 HOH HOH . M 4 HOH A 43 445 139 HOH HOH . M 4 HOH A 44 446 140 HOH HOH . M 4 HOH A 45 447 147 HOH HOH . M 4 HOH A 46 448 149 HOH HOH . M 4 HOH A 47 449 152 HOH HOH . M 4 HOH A 48 450 155 HOH HOH . M 4 HOH A 49 451 175 HOH HOH . M 4 HOH A 50 452 177 HOH HOH . M 4 HOH A 51 453 198 HOH HOH . M 4 HOH A 52 454 199 HOH HOH . M 4 HOH A 53 455 201 HOH HOH . M 4 HOH A 54 456 206 HOH HOH . M 4 HOH A 55 457 211 HOH HOH . M 4 HOH A 56 458 216 HOH HOH . M 4 HOH A 57 459 220 HOH HOH . M 4 HOH A 58 460 221 HOH HOH . M 4 HOH A 59 461 236 HOH HOH . M 4 HOH A 60 462 240 HOH HOH . M 4 HOH A 61 463 250 HOH HOH . M 4 HOH A 62 464 252 HOH HOH . M 4 HOH A 63 465 255 HOH HOH . M 4 HOH A 64 466 269 HOH HOH . M 4 HOH A 65 467 274 HOH HOH . M 4 HOH A 66 468 282 HOH HOH . N 4 HOH B 1 405 4 HOH HOH . N 4 HOH B 2 406 5 HOH HOH . N 4 HOH B 3 407 8 HOH HOH . N 4 HOH B 4 408 11 HOH HOH . N 4 HOH B 5 409 17 HOH HOH . N 4 HOH B 6 410 18 HOH HOH . N 4 HOH B 7 411 20 HOH HOH . N 4 HOH B 8 412 26 HOH HOH . N 4 HOH B 9 413 36 HOH HOH . N 4 HOH B 10 414 41 HOH HOH . N 4 HOH B 11 415 59 HOH HOH . N 4 HOH B 12 416 61 HOH HOH . N 4 HOH B 13 417 65 HOH HOH . N 4 HOH B 14 418 73 HOH HOH . N 4 HOH B 15 419 74 HOH HOH . N 4 HOH B 16 420 84 HOH HOH . N 4 HOH B 17 421 85 HOH HOH . N 4 HOH B 18 422 87 HOH HOH . N 4 HOH B 19 423 91 HOH HOH . N 4 HOH B 20 424 95 HOH HOH . N 4 HOH B 21 425 97 HOH HOH . N 4 HOH B 22 426 101 HOH HOH . N 4 HOH B 23 427 105 HOH HOH . N 4 HOH B 24 428 106 HOH HOH . N 4 HOH B 25 429 111 HOH HOH . N 4 HOH B 26 430 112 HOH HOH . N 4 HOH B 27 431 113 HOH HOH . N 4 HOH B 28 432 114 HOH HOH . N 4 HOH B 29 433 118 HOH HOH . N 4 HOH B 30 434 120 HOH HOH . N 4 HOH B 31 435 121 HOH HOH . N 4 HOH B 32 436 123 HOH HOH . N 4 HOH B 33 437 125 HOH HOH . N 4 HOH B 34 438 127 HOH HOH . N 4 HOH B 35 439 128 HOH HOH . N 4 HOH B 36 440 129 HOH HOH . N 4 HOH B 37 441 130 HOH HOH . N 4 HOH B 38 442 134 HOH HOH . N 4 HOH B 39 443 137 HOH HOH . N 4 HOH B 40 444 141 HOH HOH . N 4 HOH B 41 445 142 HOH HOH . N 4 HOH B 42 446 143 HOH HOH . N 4 HOH B 43 447 145 HOH HOH . N 4 HOH B 44 448 159 HOH HOH . N 4 HOH B 45 449 163 HOH HOH . N 4 HOH B 46 450 169 HOH HOH . N 4 HOH B 47 451 170 HOH HOH . N 4 HOH B 48 452 174 HOH HOH . N 4 HOH B 49 453 178 HOH HOH . N 4 HOH B 50 454 183 HOH HOH . N 4 HOH B 51 455 185 HOH HOH . N 4 HOH B 52 456 190 HOH HOH . N 4 HOH B 53 457 191 HOH HOH . N 4 HOH B 54 458 192 HOH HOH . N 4 HOH B 55 459 193 HOH HOH . N 4 HOH B 56 460 200 HOH HOH . N 4 HOH B 57 461 207 HOH HOH . N 4 HOH B 58 462 208 HOH HOH . N 4 HOH B 59 463 214 HOH HOH . N 4 HOH B 60 464 215 HOH HOH . N 4 HOH B 61 465 218 HOH HOH . N 4 HOH B 62 466 222 HOH HOH . N 4 HOH B 63 467 225 HOH HOH . N 4 HOH B 64 468 227 HOH HOH . N 4 HOH B 65 469 232 HOH HOH . N 4 HOH B 66 470 233 HOH HOH . N 4 HOH B 67 471 239 HOH HOH . N 4 HOH B 68 472 244 HOH HOH . N 4 HOH B 69 473 248 HOH HOH . N 4 HOH B 70 474 251 HOH HOH . N 4 HOH B 71 475 254 HOH HOH . N 4 HOH B 72 476 257 HOH HOH . N 4 HOH B 73 477 259 HOH HOH . N 4 HOH B 74 478 271 HOH HOH . N 4 HOH B 75 479 276 HOH HOH . N 4 HOH B 76 480 277 HOH HOH . O 4 HOH C 1 407 15 HOH HOH . O 4 HOH C 2 408 44 HOH HOH . O 4 HOH C 3 409 66 HOH HOH . O 4 HOH C 4 410 69 HOH HOH . O 4 HOH C 5 411 90 HOH HOH . O 4 HOH C 6 412 110 HOH HOH . O 4 HOH C 7 413 156 HOH HOH . O 4 HOH C 8 414 158 HOH HOH . O 4 HOH C 9 415 164 HOH HOH . O 4 HOH C 10 416 165 HOH HOH . O 4 HOH C 11 417 173 HOH HOH . O 4 HOH C 12 418 176 HOH HOH . O 4 HOH C 13 419 179 HOH HOH . O 4 HOH C 14 420 180 HOH HOH . O 4 HOH C 15 421 181 HOH HOH . O 4 HOH C 16 422 184 HOH HOH . O 4 HOH C 17 423 186 HOH HOH . O 4 HOH C 18 424 187 HOH HOH . O 4 HOH C 19 425 188 HOH HOH . O 4 HOH C 20 426 189 HOH HOH . O 4 HOH C 21 427 195 HOH HOH . O 4 HOH C 22 428 196 HOH HOH . O 4 HOH C 23 429 197 HOH HOH . O 4 HOH C 24 430 203 HOH HOH . O 4 HOH C 25 431 205 HOH HOH . O 4 HOH C 26 432 219 HOH HOH . O 4 HOH C 27 433 224 HOH HOH . O 4 HOH C 28 434 228 HOH HOH . O 4 HOH C 29 435 230 HOH HOH . O 4 HOH C 30 436 234 HOH HOH . O 4 HOH C 31 437 241 HOH HOH . O 4 HOH C 32 438 242 HOH HOH . O 4 HOH C 33 439 243 HOH HOH . O 4 HOH C 34 440 247 HOH HOH . O 4 HOH C 35 441 249 HOH HOH . O 4 HOH C 36 442 256 HOH HOH . O 4 HOH C 37 443 258 HOH HOH . O 4 HOH C 38 444 260 HOH HOH . O 4 HOH C 39 445 263 HOH HOH . O 4 HOH C 40 446 265 HOH HOH . O 4 HOH C 41 447 268 HOH HOH . O 4 HOH C 42 448 270 HOH HOH . O 4 HOH C 43 449 272 HOH HOH . O 4 HOH C 44 450 273 HOH HOH . O 4 HOH C 45 451 278 HOH HOH . O 4 HOH C 46 452 280 HOH HOH . O 4 HOH C 47 453 281 HOH HOH . O 4 HOH C 48 454 283 HOH HOH . P 4 HOH D 1 409 46 HOH HOH . P 4 HOH D 2 410 48 HOH HOH . P 4 HOH D 3 411 56 HOH HOH . P 4 HOH D 4 412 103 HOH HOH . P 4 HOH D 5 413 117 HOH HOH . P 4 HOH D 6 414 146 HOH HOH . P 4 HOH D 7 415 148 HOH HOH . P 4 HOH D 8 416 157 HOH HOH . P 4 HOH D 9 417 160 HOH HOH . P 4 HOH D 10 418 161 HOH HOH . P 4 HOH D 11 419 162 HOH HOH . P 4 HOH D 12 420 166 HOH HOH . P 4 HOH D 13 421 167 HOH HOH . P 4 HOH D 14 422 168 HOH HOH . P 4 HOH D 15 423 171 HOH HOH . P 4 HOH D 16 424 172 HOH HOH . P 4 HOH D 17 425 182 HOH HOH . P 4 HOH D 18 426 194 HOH HOH . P 4 HOH D 19 427 202 HOH HOH . P 4 HOH D 20 428 204 HOH HOH . P 4 HOH D 21 429 209 HOH HOH . P 4 HOH D 22 430 210 HOH HOH . P 4 HOH D 23 431 212 HOH HOH . P 4 HOH D 24 432 213 HOH HOH . P 4 HOH D 25 433 217 HOH HOH . P 4 HOH D 26 434 223 HOH HOH . P 4 HOH D 27 435 226 HOH HOH . P 4 HOH D 28 436 229 HOH HOH . P 4 HOH D 29 437 231 HOH HOH . P 4 HOH D 30 438 235 HOH HOH . P 4 HOH D 31 439 237 HOH HOH . P 4 HOH D 32 440 238 HOH HOH . P 4 HOH D 33 441 245 HOH HOH . P 4 HOH D 34 442 246 HOH HOH . P 4 HOH D 35 443 253 HOH HOH . P 4 HOH D 36 444 261 HOH HOH . P 4 HOH D 37 445 262 HOH HOH . P 4 HOH D 38 446 264 HOH HOH . P 4 HOH D 39 447 266 HOH HOH . P 4 HOH D 40 448 267 HOH HOH . P 4 HOH D 41 449 275 HOH HOH . P 4 HOH D 42 450 279 HOH HOH . P 4 HOH D 43 451 284 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O9 OXQ . . . J 3 57.392 141.824 48.228 1 59.59 ? O9 OXQ 406 C 1 HETATM 2 C C6 OXQ . . . J 3 57.701 142.082 47.082 1 59.24 ? C6 OXQ 406 C 1 HETATM 3 O O8 OXQ . . . J 3 56.957 142.75 46.372 1 59.63 ? O8 OXQ 406 C 1 HETATM 4 C C2 OXQ . . . J 3 59.022 141.569 46.607 1 58.86 ? C2 OXQ 406 C 1 HETATM 5 C C1 OXQ . . . J 3 59.783 142.006 45.531 1 59.58 ? C1 OXQ 406 C 1 HETATM 6 O O7 OXQ . . . J 3 59.494 142.895 44.718 1 59.75 ? O7 OXQ 406 C 1 HETATM 7 N N3 OXQ . . . J 3 59.62 140.588 47.232 1 56.6 ? N3 OXQ 406 C 1 HETATM 8 O O4 OXQ . . . J 3 60.804 140.392 46.553 1 56.74 ? O4 OXQ 406 C 1 HETATM 9 N N5 OXQ . . . J 3 60.876 141.266 45.509 1 57.66 ? N5 OXQ 406 C 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 9 #