data_1T3R # _model_server_result.job_id '_Ao_ZscF-uJFw7FMwgS71A' _model_server_result.datetime_utc '2024-10-09 23:24:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1t3r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 1T3R # _exptl.entry_id 1T3R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1T3R _cell.length_a 50.746 _cell.length_b 57.807 _cell.length_c 62.006 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T3R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 338 n n P O2 PO4 sing 339 n n P O3 PO4 sing 340 n n P O4 PO4 sing 341 n n # _atom_sites.entry_id 1T3R _atom_sites.fract_transf_matrix[1][1] 0.019706 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017299 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016127 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 502 502 PO4 PO4 . D 2 PO4 A 1 504 504 PO4 PO4 . E 2 PO4 A 1 505 505 PO4 PO4 . F 3 017 A 1 1200 1200 017 017 . G 2 PO4 B 1 501 501 PO4 PO4 . H 2 PO4 B 1 503 503 PO4 PO4 . I 4 HOH A 1 1201 1 HOH HOH . I 4 HOH A 2 1202 2 HOH HOH . I 4 HOH A 3 1203 4 HOH HOH . I 4 HOH A 4 1204 6 HOH HOH . I 4 HOH A 5 1205 7 HOH HOH . I 4 HOH A 6 1206 8 HOH HOH . I 4 HOH A 7 1207 11 HOH HOH . I 4 HOH A 8 1208 14 HOH HOH . I 4 HOH A 9 1209 16 HOH HOH . I 4 HOH A 10 1210 20 HOH HOH . I 4 HOH A 11 1211 21 HOH HOH . I 4 HOH A 12 1212 22 HOH HOH . I 4 HOH A 13 1213 24 HOH HOH . I 4 HOH A 14 1214 25 HOH HOH . I 4 HOH A 15 1215 27 HOH HOH . I 4 HOH A 16 1216 30 HOH HOH . I 4 HOH A 17 1217 31 HOH HOH . I 4 HOH A 18 1218 36 HOH HOH . I 4 HOH A 19 1219 44 HOH HOH . I 4 HOH A 20 1220 46 HOH HOH . I 4 HOH A 21 1221 47 HOH HOH . I 4 HOH A 22 1222 48 HOH HOH . I 4 HOH A 23 1223 50 HOH HOH . I 4 HOH A 24 1224 54 HOH HOH . I 4 HOH A 25 1225 59 HOH HOH . I 4 HOH A 26 1226 65 HOH HOH . I 4 HOH A 27 1227 67 HOH HOH . I 4 HOH A 28 1228 73 HOH HOH . I 4 HOH A 29 1229 74 HOH HOH . I 4 HOH A 30 1230 76 HOH HOH . I 4 HOH A 31 1231 77 HOH HOH . I 4 HOH A 32 1232 78 HOH HOH . I 4 HOH A 33 1233 79 HOH HOH . I 4 HOH A 34 1234 81 HOH HOH . I 4 HOH A 35 1235 82 HOH HOH . I 4 HOH A 36 1236 83 HOH HOH . I 4 HOH A 37 1237 84 HOH HOH . I 4 HOH A 38 1238 85 HOH HOH . I 4 HOH A 39 1239 86 HOH HOH . I 4 HOH A 40 1240 88 HOH HOH . I 4 HOH A 41 1241 90 HOH HOH . I 4 HOH A 42 1242 92 HOH HOH . I 4 HOH A 43 1243 93 HOH HOH . I 4 HOH A 44 1244 94 HOH HOH . I 4 HOH A 45 1245 97 HOH HOH . I 4 HOH A 46 1246 98 HOH HOH . I 4 HOH A 47 1247 99 HOH HOH . I 4 HOH A 48 1248 100 HOH HOH . I 4 HOH A 49 1249 101 HOH HOH . I 4 HOH A 50 1250 102 HOH HOH . I 4 HOH A 51 1251 103 HOH HOH . I 4 HOH A 52 1252 105 HOH HOH . I 4 HOH A 53 1253 106 HOH HOH . I 4 HOH A 54 1254 111 HOH HOH . I 4 HOH A 55 1255 114 HOH HOH . I 4 HOH A 56 1256 116 HOH HOH . I 4 HOH A 57 1257 118 HOH HOH . I 4 HOH A 58 1258 123 HOH HOH . I 4 HOH A 59 1259 125 HOH HOH . I 4 HOH A 60 1260 127 HOH HOH . I 4 HOH A 61 1261 128 HOH HOH . I 4 HOH A 62 1262 129 HOH HOH . I 4 HOH A 63 1263 130 HOH HOH . I 4 HOH A 64 1264 133 HOH HOH . I 4 HOH A 65 1265 135 HOH HOH . I 4 HOH A 66 1266 138 HOH HOH . I 4 HOH A 67 1267 139 HOH HOH . I 4 HOH A 68 1268 141 HOH HOH . I 4 HOH A 69 1269 144 HOH HOH . I 4 HOH A 70 1270 145 HOH HOH . I 4 HOH A 71 1271 149 HOH HOH . I 4 HOH A 72 1272 152 HOH HOH . I 4 HOH A 73 1273 153 HOH HOH . I 4 HOH A 74 1274 154 HOH HOH . I 4 HOH A 75 1275 155 HOH HOH . I 4 HOH A 76 1276 157 HOH HOH . I 4 HOH A 77 1277 159 HOH HOH . I 4 HOH A 78 1278 164 HOH HOH . I 4 HOH A 79 1279 167 HOH HOH . I 4 HOH A 80 1280 169 HOH HOH . I 4 HOH A 81 1281 170 HOH HOH . I 4 HOH A 82 1282 173 HOH HOH . I 4 HOH A 83 1283 176 HOH HOH . I 4 HOH A 84 1284 177 HOH HOH . I 4 HOH A 85 1285 179 HOH HOH . I 4 HOH A 86 1286 180 HOH HOH . I 4 HOH A 87 1287 182 HOH HOH . I 4 HOH A 88 1288 183 HOH HOH . I 4 HOH A 89 1289 184 HOH HOH . I 4 HOH A 90 1290 185 HOH HOH . I 4 HOH A 91 1291 187 HOH HOH . I 4 HOH A 92 1292 188 HOH HOH . I 4 HOH A 93 1293 195 HOH HOH . I 4 HOH A 94 1294 197 HOH HOH . I 4 HOH A 95 1295 199 HOH HOH . I 4 HOH A 96 1296 202 HOH HOH . I 4 HOH A 97 1297 208 HOH HOH . I 4 HOH A 98 1298 209 HOH HOH . I 4 HOH A 99 1299 211 HOH HOH . I 4 HOH A 100 1300 215 HOH HOH . I 4 HOH A 101 1301 216 HOH HOH . I 4 HOH A 102 1302 217 HOH HOH . I 4 HOH A 103 1303 218 HOH HOH . I 4 HOH A 104 1304 219 HOH HOH . I 4 HOH A 105 1305 222 HOH HOH . I 4 HOH A 106 1306 223 HOH HOH . I 4 HOH A 107 1307 224 HOH HOH . I 4 HOH A 108 1308 228 HOH HOH . I 4 HOH A 109 1309 231 HOH HOH . I 4 HOH A 110 1310 233 HOH HOH . I 4 HOH A 111 1311 234 HOH HOH . I 4 HOH A 112 1312 238 HOH HOH . I 4 HOH A 113 1313 248 HOH HOH . I 4 HOH A 114 1314 251 HOH HOH . I 4 HOH A 115 1315 253 HOH HOH . I 4 HOH A 116 1316 254 HOH HOH . I 4 HOH A 117 1317 258 HOH HOH . I 4 HOH A 118 1318 259 HOH HOH . I 4 HOH A 119 1319 260 HOH HOH . I 4 HOH A 120 1320 263 HOH HOH . I 4 HOH A 121 1321 264 HOH HOH . I 4 HOH A 122 1322 268 HOH HOH . I 4 HOH A 123 1323 269 HOH HOH . I 4 HOH A 124 1324 270 HOH HOH . I 4 HOH A 125 1325 285 HOH HOH . I 4 HOH A 126 1326 288 HOH HOH . I 4 HOH A 127 1327 289 HOH HOH . I 4 HOH A 128 1328 296 HOH HOH . I 4 HOH A 129 1329 297 HOH HOH . I 4 HOH A 130 1330 298 HOH HOH . I 4 HOH A 131 1331 299 HOH HOH . I 4 HOH A 132 1332 302 HOH HOH . I 4 HOH A 133 1333 303 HOH HOH . J 4 HOH B 1 504 3 HOH HOH . J 4 HOH B 2 505 5 HOH HOH . J 4 HOH B 3 506 9 HOH HOH . J 4 HOH B 4 507 10 HOH HOH . J 4 HOH B 5 508 12 HOH HOH . J 4 HOH B 6 509 13 HOH HOH . J 4 HOH B 7 510 17 HOH HOH . J 4 HOH B 8 511 18 HOH HOH . J 4 HOH B 9 512 19 HOH HOH . J 4 HOH B 10 513 23 HOH HOH . J 4 HOH B 11 514 26 HOH HOH . J 4 HOH B 12 515 28 HOH HOH . J 4 HOH B 13 516 29 HOH HOH . J 4 HOH B 14 517 32 HOH HOH . J 4 HOH B 15 518 33 HOH HOH . J 4 HOH B 16 519 34 HOH HOH . J 4 HOH B 17 520 35 HOH HOH . J 4 HOH B 18 521 37 HOH HOH . J 4 HOH B 19 522 38 HOH HOH . J 4 HOH B 20 523 39 HOH HOH . J 4 HOH B 21 524 40 HOH HOH . J 4 HOH B 22 525 41 HOH HOH . J 4 HOH B 23 526 42 HOH HOH . J 4 HOH B 24 527 43 HOH HOH . J 4 HOH B 25 528 45 HOH HOH . J 4 HOH B 26 529 49 HOH HOH . J 4 HOH B 27 530 51 HOH HOH . J 4 HOH B 28 531 53 HOH HOH . J 4 HOH B 29 532 57 HOH HOH . J 4 HOH B 30 533 58 HOH HOH . J 4 HOH B 31 534 62 HOH HOH . J 4 HOH B 32 535 64 HOH HOH . J 4 HOH B 33 536 66 HOH HOH . J 4 HOH B 34 537 68 HOH HOH . J 4 HOH B 35 538 69 HOH HOH . J 4 HOH B 36 539 70 HOH HOH . J 4 HOH B 37 540 71 HOH HOH . J 4 HOH B 38 541 75 HOH HOH . J 4 HOH B 39 542 87 HOH HOH . J 4 HOH B 40 543 89 HOH HOH . J 4 HOH B 41 544 91 HOH HOH . J 4 HOH B 42 545 96 HOH HOH . J 4 HOH B 43 546 104 HOH HOH . J 4 HOH B 44 547 108 HOH HOH . J 4 HOH B 45 548 110 HOH HOH . J 4 HOH B 46 549 112 HOH HOH . J 4 HOH B 47 550 115 HOH HOH . J 4 HOH B 48 551 117 HOH HOH . J 4 HOH B 49 552 119 HOH HOH . J 4 HOH B 50 553 121 HOH HOH . J 4 HOH B 51 554 122 HOH HOH . J 4 HOH B 52 555 124 HOH HOH . J 4 HOH B 53 556 126 HOH HOH . J 4 HOH B 54 557 131 HOH HOH . J 4 HOH B 55 558 132 HOH HOH . J 4 HOH B 56 559 134 HOH HOH . J 4 HOH B 57 560 136 HOH HOH . J 4 HOH B 58 561 137 HOH HOH . J 4 HOH B 59 562 140 HOH HOH . J 4 HOH B 60 563 142 HOH HOH . J 4 HOH B 61 564 143 HOH HOH . J 4 HOH B 62 565 1145 HOH HOH . J 4 HOH B 63 566 146 HOH HOH . J 4 HOH B 64 567 147 HOH HOH . J 4 HOH B 65 568 148 HOH HOH . J 4 HOH B 66 569 150 HOH HOH . J 4 HOH B 67 570 151 HOH HOH . J 4 HOH B 68 571 158 HOH HOH . J 4 HOH B 69 572 160 HOH HOH . J 4 HOH B 70 573 161 HOH HOH . J 4 HOH B 71 574 162 HOH HOH . J 4 HOH B 72 575 163 HOH HOH . J 4 HOH B 73 576 166 HOH HOH . J 4 HOH B 74 577 168 HOH HOH . J 4 HOH B 75 578 172 HOH HOH . J 4 HOH B 76 579 174 HOH HOH . J 4 HOH B 77 580 175 HOH HOH . J 4 HOH B 78 581 178 HOH HOH . J 4 HOH B 79 582 181 HOH HOH . J 4 HOH B 80 583 186 HOH HOH . J 4 HOH B 81 584 189 HOH HOH . J 4 HOH B 82 585 191 HOH HOH . J 4 HOH B 83 586 193 HOH HOH . J 4 HOH B 84 587 194 HOH HOH . J 4 HOH B 85 588 196 HOH HOH . J 4 HOH B 86 589 198 HOH HOH . J 4 HOH B 87 590 201 HOH HOH . J 4 HOH B 88 591 203 HOH HOH . J 4 HOH B 89 592 204 HOH HOH . J 4 HOH B 90 593 205 HOH HOH . J 4 HOH B 91 594 206 HOH HOH . J 4 HOH B 92 595 207 HOH HOH . J 4 HOH B 93 596 210 HOH HOH . J 4 HOH B 94 597 212 HOH HOH . J 4 HOH B 95 598 213 HOH HOH . J 4 HOH B 96 599 220 HOH HOH . J 4 HOH B 97 600 221 HOH HOH . J 4 HOH B 98 601 225 HOH HOH . J 4 HOH B 99 602 226 HOH HOH . J 4 HOH B 100 603 227 HOH HOH . J 4 HOH B 101 604 235 HOH HOH . J 4 HOH B 102 605 237 HOH HOH . J 4 HOH B 103 606 239 HOH HOH . J 4 HOH B 104 607 249 HOH HOH . J 4 HOH B 105 608 255 HOH HOH . J 4 HOH B 106 609 256 HOH HOH . J 4 HOH B 107 610 257 HOH HOH . J 4 HOH B 108 611 265 HOH HOH . J 4 HOH B 109 612 267 HOH HOH . J 4 HOH B 110 613 271 HOH HOH . J 4 HOH B 111 614 272 HOH HOH . J 4 HOH B 112 615 274 HOH HOH . J 4 HOH B 113 616 276 HOH HOH . J 4 HOH B 114 617 277 HOH HOH . J 4 HOH B 115 618 278 HOH HOH . J 4 HOH B 116 619 279 HOH HOH . J 4 HOH B 117 620 280 HOH HOH . J 4 HOH B 118 621 282 HOH HOH . J 4 HOH B 119 622 283 HOH HOH . J 4 HOH B 120 623 284 HOH HOH . J 4 HOH B 121 624 286 HOH HOH . J 4 HOH B 122 625 287 HOH HOH . J 4 HOH B 123 626 291 HOH HOH . J 4 HOH B 124 627 292 HOH HOH . J 4 HOH B 125 628 295 HOH HOH . J 4 HOH B 126 629 400 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 2 21.885 38.055 28.472 1 48.18 ? P PO4 502 A 1 HETATM 2 O O1 PO4 . . . C 2 20.858 37.017 28.17 1 29.71 ? O1 PO4 502 A 1 HETATM 3 O O2 PO4 . . . C 2 22.214 37.997 29.948 1 51.15 ? O2 PO4 502 A 1 HETATM 4 O O3 PO4 . . . C 2 21.307 39.44 28.149 1 53.51 ? O3 PO4 502 A 1 HETATM 5 O O4 PO4 . . . C 2 23.219 37.809 27.658 1 51.63 ? O4 PO4 502 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #