data_1T4E # _model_server_result.job_id Pzc5kFH5EAgjyaquhTL1Yg _model_server_result.datetime_utc '2025-01-07 09:50:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1t4e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":112}' # _entry.id 1T4E # _exptl.entry_id 1T4E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 581.187 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(4-CHLOROPHENYL)[3-(4-CHLOROPHENYL)-7-IODO-2,5-DIOXO-1,2,3,5-TETRAHYDRO-4H-1,4-BENZODIAZEPIN-4-YL]ACETIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1T4E _cell.length_a 98.486 _cell.length_b 98.486 _cell.length_c 74.038 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T4E _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C23 H15 Cl2 I N2 O4' _chem_comp.formula_weight 581.187 _chem_comp.id DIZ _chem_comp.mon_nstd_flag . _chem_comp.name '(4-CHLOROPHENYL)[3-(4-CHLOROPHENYL)-7-IODO-2,5-DIOXO-1,2,3,5-TETRAHYDRO-4H-1,4-BENZODIAZEPIN-4-YL]ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms DI-CHLORO-BENZO-DIAZEPINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL1 C1 DIZ sing 83 n n C1 C2 DIZ doub 84 n y C1 C6 DIZ sing 85 n y C2 C3 DIZ sing 86 n y C2 H2 DIZ sing 87 n n C3 C4 DIZ doub 88 n y C3 H3 DIZ sing 89 n n C4 C5 DIZ sing 90 n y C4 C7 DIZ sing 91 n n C5 C6 DIZ doub 92 n y C5 H5 DIZ sing 93 n n C6 H6 DIZ sing 94 n n C7 C8 DIZ sing 95 n n C7 N1 DIZ sing 96 n n C7 H7 DIZ sing 97 n n C8 O1 DIZ doub 98 n n C8 O2 DIZ sing 99 n n O2 HO2 DIZ sing 100 n n N1 C9 DIZ sing 101 n n N1 C17 DIZ sing 102 n n C9 O3 DIZ doub 103 n n C9 C10 DIZ sing 104 n n C10 C11 DIZ sing 105 n y C10 C15 DIZ doub 106 n y C11 C12 DIZ doub 107 n y C11 H11 DIZ sing 108 n n C12 I1 DIZ sing 109 n n C12 C13 DIZ sing 110 n y C13 C14 DIZ doub 111 n y C13 H13 DIZ sing 112 n n C14 C15 DIZ sing 113 n y C14 H14 DIZ sing 114 n n C15 N2 DIZ sing 115 n n N2 C16 DIZ sing 116 n n N2 HN2 DIZ sing 117 n n C16 O4 DIZ doub 118 n n C16 C17 DIZ sing 119 n n C17 C18 DIZ sing 120 n n C17 H17 DIZ sing 121 n n C18 C19 DIZ sing 122 n y C18 C23 DIZ doub 123 n y C19 C20 DIZ doub 124 n y C19 H19 DIZ sing 125 n n C20 C21 DIZ sing 126 n y C20 H20 DIZ sing 127 n n C21 CL2 DIZ sing 128 n n C21 C22 DIZ doub 129 n y C22 C23 DIZ sing 130 n y C22 H22 DIZ sing 131 n n C23 H23 DIZ sing 132 n n # _atom_sites.entry_id 1T4E _atom_sites.fract_transf_matrix[1][1] 0.010154 _atom_sites.fract_transf_matrix[1][2] 0.005862 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011725 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013507 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DIZ A 1 112 1 DIZ DCB . D 2 DIZ B 1 112 1 DIZ DCB . E 3 HOH A 1 113 1 HOH HOH . E 3 HOH A 2 114 2 HOH HOH . E 3 HOH A 3 115 4 HOH HOH . E 3 HOH A 4 116 6 HOH HOH . E 3 HOH A 5 117 8 HOH HOH . E 3 HOH A 6 118 9 HOH HOH . E 3 HOH A 7 119 10 HOH HOH . E 3 HOH A 8 120 14 HOH HOH . E 3 HOH A 9 121 15 HOH HOH . E 3 HOH A 10 122 16 HOH HOH . E 3 HOH A 11 123 17 HOH HOH . E 3 HOH A 12 124 18 HOH HOH . E 3 HOH A 13 125 21 HOH HOH . E 3 HOH A 14 126 22 HOH HOH . E 3 HOH A 15 127 25 HOH HOH . E 3 HOH A 16 128 27 HOH HOH . E 3 HOH A 17 129 31 HOH HOH . E 3 HOH A 18 130 34 HOH HOH . E 3 HOH A 19 131 35 HOH HOH . E 3 HOH A 20 132 40 HOH HOH . E 3 HOH A 21 133 42 HOH HOH . E 3 HOH A 22 134 44 HOH HOH . E 3 HOH A 23 135 45 HOH HOH . E 3 HOH A 24 136 49 HOH HOH . E 3 HOH A 25 137 50 HOH HOH . F 3 HOH B 1 113 3 HOH HOH . F 3 HOH B 2 114 5 HOH HOH . F 3 HOH B 3 115 7 HOH HOH . F 3 HOH B 4 116 11 HOH HOH . F 3 HOH B 5 117 12 HOH HOH . F 3 HOH B 6 118 13 HOH HOH . F 3 HOH B 7 119 19 HOH HOH . F 3 HOH B 8 120 20 HOH HOH . F 3 HOH B 9 121 23 HOH HOH . F 3 HOH B 10 122 24 HOH HOH . F 3 HOH B 11 123 26 HOH HOH . F 3 HOH B 12 124 28 HOH HOH . F 3 HOH B 13 125 29 HOH HOH . F 3 HOH B 14 126 30 HOH HOH . F 3 HOH B 15 127 32 HOH HOH . F 3 HOH B 16 128 33 HOH HOH . F 3 HOH B 17 129 36 HOH HOH . F 3 HOH B 18 130 37 HOH HOH . F 3 HOH B 19 131 38 HOH HOH . F 3 HOH B 20 132 39 HOH HOH . F 3 HOH B 21 133 41 HOH HOH . F 3 HOH B 22 134 43 HOH HOH . F 3 HOH B 23 135 46 HOH HOH . F 3 HOH B 24 136 47 HOH HOH . F 3 HOH B 25 137 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CL CL1 DIZ . . . C 2 46.99 12.507 23.963 1 23.67 ? CL1 DIZ 112 A 1 HETATM 2 C C1 DIZ . . . C 2 46.459 13.078 25.479 1 19.71 ? C1 DIZ 112 A 1 HETATM 3 C C2 DIZ . . . C 2 45.473 14.089 25.525 1 20.3 ? C2 DIZ 112 A 1 HETATM 4 C C3 DIZ . . . C 2 44.995 14.553 26.771 1 20.35 ? C3 DIZ 112 A 1 HETATM 5 C C4 DIZ . . . C 2 45.507 14.004 28.01 1 19.96 ? C4 DIZ 112 A 1 HETATM 6 C C5 DIZ . . . C 2 46.522 12.992 27.934 1 19.16 ? C5 DIZ 112 A 1 HETATM 7 C C6 DIZ . . . C 2 46.993 12.532 26.669 1 19.05 ? C6 DIZ 112 A 1 HETATM 8 C C7 DIZ . . . C 2 44.96 14.431 29.387 1 19.88 ? C7 DIZ 112 A 1 HETATM 9 C C8 DIZ . . . C 2 44.482 15.9 29.479 1 19.11 ? C8 DIZ 112 A 1 HETATM 10 O O1 DIZ . . . C 2 45.128 16.883 29.17 1 19.82 ? O1 DIZ 112 A 1 HETATM 11 O O2 DIZ . . . C 2 43.224 16.042 29.95 1 19.25 ? O2 DIZ 112 A 1 HETATM 12 N N1 DIZ . . . C 2 43.871 13.399 29.794 1 20.21 ? N1 DIZ 112 A 1 HETATM 13 C C9 DIZ . . . C 2 44.037 12.771 31.037 1 19.9 ? C9 DIZ 112 A 1 HETATM 14 O O3 DIZ . . . C 2 44.998 13.033 31.782 1 18.53 ? O3 DIZ 112 A 1 HETATM 15 C C10 DIZ . . . C 2 43.086 11.753 31.524 1 20.59 ? C10 DIZ 112 A 1 HETATM 16 C C11 DIZ . . . C 2 43.671 10.672 32.209 1 21.46 ? C11 DIZ 112 A 1 HETATM 17 C C12 DIZ . . . C 2 42.884 9.636 32.703 1 22.62 ? C12 DIZ 112 A 1 HETATM 18 I I1 DIZ . . . C 2 43.831 8.12 33.679 1 28.56 ? I1 DIZ 112 A 1 HETATM 19 C C13 DIZ . . . C 2 41.486 9.633 32.527 1 21.39 ? C13 DIZ 112 A 1 HETATM 20 C C14 DIZ . . . C 2 40.878 10.72 31.834 1 21.18 ? C14 DIZ 112 A 1 HETATM 21 C C15 DIZ . . . C 2 41.675 11.792 31.325 1 21.13 ? C15 DIZ 112 A 1 HETATM 22 N N2 DIZ . . . C 2 40.986 12.802 30.65 1 20.55 ? N2 DIZ 112 A 1 HETATM 23 C C16 DIZ . . . C 2 41.375 13.473 29.512 1 21.76 ? C16 DIZ 112 A 1 HETATM 24 O O4 DIZ . . . C 2 40.624 14.335 29.051 1 24.87 ? O4 DIZ 112 A 1 HETATM 25 C C17 DIZ . . . C 2 42.739 13.151 28.806 1 21.19 ? C17 DIZ 112 A 1 HETATM 26 C C18 DIZ . . . C 2 42.714 11.792 28.013 1 21.92 ? C18 DIZ 112 A 1 HETATM 27 C C19 DIZ . . . C 2 43.911 11.091 27.724 1 22.07 ? C19 DIZ 112 A 1 HETATM 28 C C20 DIZ . . . C 2 43.944 9.9 26.994 1 22.59 ? C20 DIZ 112 A 1 HETATM 29 C C21 DIZ . . . C 2 42.766 9.364 26.518 1 20.71 ? C21 DIZ 112 A 1 HETATM 30 CL CL2 DIZ . . . C 2 42.851 7.955 25.617 1 21.93 ? CL2 DIZ 112 A 1 HETATM 31 C C22 DIZ . . . C 2 41.529 9.989 26.772 1 22.54 ? C22 DIZ 112 A 1 HETATM 32 C C23 DIZ . . . C 2 41.502 11.204 27.521 1 22.97 ? C23 DIZ 112 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 469 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 32 #