data_1T4S
#
_model_server_result.job_id            lnTvHkLM6zeHeKeprjae5w 
_model_server_result.datetime_utc      '2025-08-20 01:48:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1t4s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1000}' 
#
_entry.id    1T4S 
#
_exptl.entry_id    1T4S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              117.146 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            VALINE 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1T4S 
_cell.length_a            87.8 
_cell.length_b            87.8 
_cell.length_c            110.5 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1T4S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        145 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 I N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A ND1 HIS 96 A HIS 101 1_555 E MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? 
metalc ? metalc2 A OD1 ASP 119 A ASP 124 1_555 D MN MN . A MN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc3 A OD2 ASP 119 A ASP 124 1_555 E MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc4 A ND1 HIS 121 A HIS 126 1_555 D MN MN . A MN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? 
metalc ? metalc5 A OD2 ASP 123 A ASP 128 1_555 E MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? 
metalc ? metalc6 A OD2 ASP 227 A ASP 232 1_555 D MN MN . A MN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc7 A OD2 ASP 227 A ASP 232 1_555 E MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
metalc ? metalc8 A OD1 ASP 229 A ASP 234 1_555 D MN MN . A MN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? 
metalc ? metalc9 A OD2 ASP 229 A ASP 234 1_555 D MN MN . A MN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? 
metalc ? metalc10 D MN MN . A MN 500 1_555 M O HOH . A HOH 729 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.67 ? 
metalc ? metalc11 E MN MN . A MN 501 1_555 M O HOH . A HOH 729 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? 
metalc ? metalc12 B ND1 HIS 96 B HIS 101 1_555 H MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? 
metalc ? metalc13 B OD1 ASP 119 B ASP 124 1_555 G MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc14 B OD2 ASP 119 B ASP 124 1_555 H MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? 
metalc ? metalc15 B ND1 HIS 121 B HIS 126 1_555 G MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? 
metalc ? metalc16 B OD2 ASP 123 B ASP 128 1_555 H MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? 
metalc ? metalc17 B OD2 ASP 227 B ASP 232 1_555 G MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc18 B OD2 ASP 227 B ASP 232 1_555 H MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
metalc ? metalc19 B OD1 ASP 229 B ASP 234 1_555 G MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? 
metalc ? metalc20 B OD2 ASP 229 B ASP 234 1_555 G MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? 
metalc ? metalc21 G MN MN . B MN 502 1_555 N O HOH . B HOH 730 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.715 ? 
metalc ? metalc22 H MN MN . B MN 503 1_555 N O HOH . B HOH 730 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? 
metalc ? metalc23 C ND1 HIS 96 C HIS 101 1_555 K MN MN . C MN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc24 C OD1 ASP 119 C ASP 124 1_555 J MN MN . C MN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? 
metalc ? metalc25 C OD2 ASP 119 C ASP 124 1_555 K MN MN . C MN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? 
metalc ? metalc26 C ND1 HIS 121 C HIS 126 1_555 J MN MN . C MN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? 
metalc ? metalc27 C OD2 ASP 123 C ASP 128 1_555 K MN MN . C MN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? 
metalc ? metalc28 C OD2 ASP 227 C ASP 232 1_555 J MN MN . C MN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? 
metalc ? metalc29 C OD2 ASP 227 C ASP 232 1_555 K MN MN . C MN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? 
metalc ? metalc30 C OD1 ASP 229 C ASP 234 1_555 J MN MN . C MN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? 
metalc ? metalc31 C OD2 ASP 229 C ASP 234 1_555 J MN MN . C MN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? 
metalc ? metalc32 K MN MN . C MN 505 1_555 O O HOH . C HOH 728 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? 
#
_chem_comp.formula           'C5 H11 N O2' 
_chem_comp.formula_weight    117.146 
_chem_comp.id                VAL 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              VALINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA VAL sing 358 n n 
N H VAL sing 359 n n 
N H2 VAL sing 360 n n 
CA C VAL sing 361 n n 
CA CB VAL sing 362 n n 
CA HA VAL sing 363 n n 
C O VAL doub 364 n n 
C OXT VAL sing 365 n n 
CB CG1 VAL sing 366 n n 
CB CG2 VAL sing 367 n n 
CB HB VAL sing 368 n n 
CG1 HG11 VAL sing 369 n n 
CG1 HG12 VAL sing 370 n n 
CG1 HG13 VAL sing 371 n n 
CG2 HG21 VAL sing 372 n n 
CG2 HG22 VAL sing 373 n n 
CG2 HG23 VAL sing 374 n n 
OXT HXT VAL sing 375 n n 
#
_atom_sites.entry_id                     1T4S 
_atom_sites.fract_transf_matrix[1][1]    0.01139 
_atom_sites.fract_transf_matrix[1][2]    0.006576 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013151 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00905 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 MN A 1 500 500 MN MN . 
E 2 MN A 1 501 501 MN MN . 
F 3 VAL A 1 1000 1000 VAL UNK . 
G 2 MN B 1 502 502 MN MN . 
H 2 MN B 1 503 503 MN MN . 
I 3 VAL B 1 1001 1001 VAL UNK . 
J 2 MN C 1 504 504 MN MN . 
K 2 MN C 1 505 505 MN MN . 
L 3 VAL C 1 1002 1002 VAL UNK . 
M 4 HOH A 1 700 700 HOH WAT . 
M 4 HOH A 2 704 704 HOH WAT . 
M 4 HOH A 3 706 706 HOH WAT . 
M 4 HOH A 4 708 708 HOH WAT . 
M 4 HOH A 5 711 711 HOH WAT . 
M 4 HOH A 6 714 714 HOH WAT . 
M 4 HOH A 7 723 723 HOH WAT . 
M 4 HOH A 8 724 724 HOH WAT . 
M 4 HOH A 9 725 725 HOH WAT . 
M 4 HOH A 10 729 729 HOH WAT . 
N 4 HOH B 1 701 701 HOH WAT . 
N 4 HOH B 2 702 702 HOH WAT . 
N 4 HOH B 3 703 703 HOH WAT . 
N 4 HOH B 4 705 705 HOH WAT . 
N 4 HOH B 5 707 707 HOH WAT . 
N 4 HOH B 6 709 709 HOH WAT . 
N 4 HOH B 7 712 712 HOH WAT . 
N 4 HOH B 8 715 715 HOH WAT . 
N 4 HOH B 9 716 716 HOH WAT . 
N 4 HOH B 10 719 719 HOH WAT . 
N 4 HOH B 11 720 720 HOH WAT . 
N 4 HOH B 12 726 726 HOH WAT . 
N 4 HOH B 13 727 727 HOH WAT . 
N 4 HOH B 14 730 730 HOH WAT . 
O 4 HOH C 1 710 710 HOH WAT . 
O 4 HOH C 2 713 713 HOH WAT . 
O 4 HOH C 3 717 717 HOH WAT . 
O 4 HOH C 4 718 718 HOH WAT . 
O 4 HOH C 5 721 721 HOH WAT . 
O 4 HOH C 6 722 722 HOH WAT . 
O 4 HOH C 7 728 728 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N VAL . . . F 3 0.732 45.347 -8.519 1 84.65 ? N VAL 1000 A 1 
HETATM 2 C CA VAL . . . F 3 0.334 44.736 -9.766 1 83.87 ? CA VAL 1000 A 1 
HETATM 3 C C VAL . . . F 3 0.967 45.581 -10.94 1 83.86 ? C VAL 1000 A 1 
HETATM 4 O O VAL . . . F 3 0.094 46.125 -11.821 1 83.96 ? O VAL 1000 A 1 
HETATM 5 C CB VAL . . . F 3 -1.218 44.377 -9.709 1 83.08 ? CB VAL 1000 A 1 
HETATM 6 C CG1 VAL . . . F 3 -2.069 44.863 -10.898 1 82.99 ? CG1 VAL 1000 A 1 
HETATM 7 C CG2 VAL . . . F 3 -1.374 42.876 -9.569 1 82.69 ? CG2 VAL 1000 A 1 
HETATM 8 O OXT VAL . . . F 3 2.167 45.796 -11.061 1 83.78 ? OXT VAL 1000 A 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           361 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           8 
#