data_1T4U # _model_server_result.job_id xUXszVOJgXS3OwWdxtjL_g _model_server_result.datetime_utc '2024-11-21 16:17:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1t4u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":4815}' # _entry.id 1T4U # _exptl.entry_id 1T4U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 483.558 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-METHANESULFONYL-BENZENESULFONIC ACID 3-METHYL-5-((1-AMIDINOAMINOOXYMETHYL-CYCLOPROPYL)METHYLOXY)-PHENYLESTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.3 _cell.angle_gamma 90 _cell.entry_id 1T4U _cell.length_a 70.71 _cell.length_b 72.23 _cell.length_c 72.68 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T4U _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 L CYS 9 1_555 B SG CYS 119 H CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? disulf ? disulf2 B SG CYS 28 H CYS 64 1_555 B SG CYS 44 H CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 B SG CYS 173 H CYS 203 1_555 B SG CYS 187 H CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 B SG CYS 201 H CYS 231 1_555 B SG CYS 231 H CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? covale ? covale1 C C GLU 8 I GLU 297 1_555 C N TYS 9 I TYS 298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale2 C C TYS 9 I TYS 298 1_555 C N LEU 10 I LEU 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C20 H25 N3 O7 S2' _chem_comp.formula_weight 483.558 _chem_comp.id 81A _chem_comp.mon_nstd_flag . _chem_comp.name '2-METHANESULFONYL-BENZENESULFONIC ACID 3-METHYL-5-((1-AMIDINOAMINOOXYMETHYL-CYCLOPROPYL)METHYLOXY)-PHENYLESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O4 81A doub 1 n n S O5 81A doub 2 n n S C16 81A sing 3 n n S C27 81A sing 4 n n C16 H161 81A sing 5 n n C16 H162 81A sing 6 n n C16 H163 81A sing 7 n n C26 C25 81A doub 8 n y C26 C27 81A sing 9 n y C26 S20 81A sing 10 n n C25 C24 81A sing 11 n y C25 H25 81A sing 12 n n C24 C23 81A doub 13 n y C24 H24 81A sing 14 n n C23 C28 81A sing 15 n y C23 H23 81A sing 16 n n C28 C27 81A doub 17 n y C28 H28 81A sing 18 n n C2 C2A 81A sing 19 n n C2 C1 81A doub 20 n y C2 C3 81A sing 21 n y C2A H21A 81A sing 22 n n C2A H22A 81A sing 23 n n C2A H23A 81A sing 24 n n C6 C1 81A sing 25 n y C6 C5 81A doub 26 n y C6 O8 81A sing 27 n n C1 H1 81A sing 28 n n C3 C4 81A doub 29 n y C3 H3 81A sing 30 n n C5 C4 81A sing 31 n y C5 H5 81A sing 32 n n C4 O7 81A sing 33 n n O8 S20 81A sing 34 n n S20 O21 81A doub 35 n n S20 O22 81A doub 36 n n O7 C10 81A sing 37 n n C10 C14 81A sing 38 n n C10 H101 81A sing 39 n n C10 H102 81A sing 40 n n C14 CEA 81A sing 41 n n C14 CEB 81A sing 42 n n C14 C15 81A sing 43 n n CEA CEB 81A sing 44 n n CEA H141 81A sing 45 n n CEA H142 81A sing 46 n n CEB H143 81A sing 47 n n CEB H144 81A sing 48 n n C15 O16 81A sing 49 n n C15 H151 81A sing 50 n n C15 H152 81A sing 51 n n O16 N10 81A sing 52 n n N10 C17 81A sing 53 n n N10 HE 81A sing 54 n n C17 N11 81A doub 55 n n C17 N12 81A sing 56 n n N11 HH12 81A sing 57 n n N12 HH21 81A sing 58 n n N12 HH22 81A sing 59 n n # _atom_sites.entry_id 1T4U _atom_sites.fract_transf_matrix[1][1] 0.014142 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00257 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013845 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013984 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 81A H 1 4815 4815 81A 81A . E 5 HOH L 1 311 311 HOH HOH . E 5 HOH L 2 329 329 HOH HOH . E 5 HOH L 3 330 330 HOH HOH . E 5 HOH L 4 331 331 HOH HOH . E 5 HOH L 5 370 370 HOH HOH . E 5 HOH L 6 372 372 HOH HOH . E 5 HOH L 7 375 375 HOH HOH . E 5 HOH L 8 380 380 HOH HOH . E 5 HOH L 9 397 397 HOH HOH . E 5 HOH L 10 401 401 HOH HOH . E 5 HOH L 11 414 414 HOH HOH . E 5 HOH L 12 423 423 HOH HOH . E 5 HOH L 13 424 424 HOH HOH . F 5 HOH H 1 301 301 HOH HOH . F 5 HOH H 2 302 302 HOH HOH . F 5 HOH H 3 303 303 HOH HOH . F 5 HOH H 4 304 304 HOH HOH . F 5 HOH H 5 305 305 HOH HOH . F 5 HOH H 6 306 306 HOH HOH . F 5 HOH H 7 307 307 HOH HOH . F 5 HOH H 8 308 308 HOH HOH . F 5 HOH H 9 309 309 HOH HOH . F 5 HOH H 10 310 310 HOH HOH . F 5 HOH H 11 312 312 HOH HOH . F 5 HOH H 12 313 313 HOH HOH . F 5 HOH H 13 314 314 HOH HOH . F 5 HOH H 14 315 315 HOH HOH . F 5 HOH H 15 316 316 HOH HOH . F 5 HOH H 16 317 317 HOH HOH . F 5 HOH H 17 318 318 HOH HOH . F 5 HOH H 18 319 319 HOH HOH . F 5 HOH H 19 320 320 HOH HOH . F 5 HOH H 20 321 321 HOH HOH . F 5 HOH H 21 322 322 HOH HOH . F 5 HOH H 22 324 324 HOH HOH . F 5 HOH H 23 325 325 HOH HOH . F 5 HOH H 24 327 327 HOH HOH . F 5 HOH H 25 328 328 HOH HOH . F 5 HOH H 26 332 332 HOH HOH . F 5 HOH H 27 333 333 HOH HOH . F 5 HOH H 28 334 334 HOH HOH . F 5 HOH H 29 335 335 HOH HOH . F 5 HOH H 30 336 336 HOH HOH . F 5 HOH H 31 337 337 HOH HOH . F 5 HOH H 32 339 339 HOH HOH . F 5 HOH H 33 340 340 HOH HOH . F 5 HOH H 34 341 341 HOH HOH . F 5 HOH H 35 342 342 HOH HOH . F 5 HOH H 36 343 343 HOH HOH . F 5 HOH H 37 345 345 HOH HOH . F 5 HOH H 38 348 348 HOH HOH . F 5 HOH H 39 350 350 HOH HOH . F 5 HOH H 40 351 351 HOH HOH . F 5 HOH H 41 354 354 HOH HOH . F 5 HOH H 42 355 355 HOH HOH . F 5 HOH H 43 356 356 HOH HOH . F 5 HOH H 44 357 357 HOH HOH . F 5 HOH H 45 358 358 HOH HOH . F 5 HOH H 46 360 360 HOH HOH . F 5 HOH H 47 361 361 HOH HOH . F 5 HOH H 48 362 362 HOH HOH . F 5 HOH H 49 363 363 HOH HOH . F 5 HOH H 50 364 364 HOH HOH . F 5 HOH H 51 365 365 HOH HOH . F 5 HOH H 52 366 366 HOH HOH . F 5 HOH H 53 367 367 HOH HOH . F 5 HOH H 54 368 368 HOH HOH . F 5 HOH H 55 369 369 HOH HOH . F 5 HOH H 56 373 373 HOH HOH . F 5 HOH H 57 374 374 HOH HOH . F 5 HOH H 58 376 376 HOH HOH . F 5 HOH H 59 377 377 HOH HOH . F 5 HOH H 60 383 383 HOH HOH . F 5 HOH H 61 385 385 HOH HOH . F 5 HOH H 62 387 387 HOH HOH . F 5 HOH H 63 388 388 HOH HOH . F 5 HOH H 64 389 389 HOH HOH . F 5 HOH H 65 393 393 HOH HOH . F 5 HOH H 66 394 394 HOH HOH . F 5 HOH H 67 400 400 HOH HOH . F 5 HOH H 68 402 402 HOH HOH . F 5 HOH H 69 403 403 HOH HOH . F 5 HOH H 70 404 404 HOH HOH . F 5 HOH H 71 405 405 HOH HOH . F 5 HOH H 72 406 406 HOH HOH . F 5 HOH H 73 407 407 HOH HOH . F 5 HOH H 74 410 410 HOH HOH . F 5 HOH H 75 411 411 HOH HOH . F 5 HOH H 76 412 412 HOH HOH . F 5 HOH H 77 413 413 HOH HOH . F 5 HOH H 78 415 415 HOH HOH . F 5 HOH H 79 421 421 HOH HOH . F 5 HOH H 80 422 422 HOH HOH . F 5 HOH H 81 425 425 HOH HOH . F 5 HOH H 82 426 426 HOH HOH . F 5 HOH H 83 427 427 HOH HOH . F 5 HOH H 84 428 428 HOH HOH . F 5 HOH H 85 429 429 HOH HOH . F 5 HOH H 86 430 430 HOH HOH . F 5 HOH H 87 431 431 HOH HOH . F 5 HOH H 88 432 432 HOH HOH . F 5 HOH H 89 436 436 HOH HOH . F 5 HOH H 90 437 437 HOH HOH . F 5 HOH H 91 438 438 HOH HOH . F 5 HOH H 92 439 439 HOH HOH . F 5 HOH H 93 440 440 HOH HOH . F 5 HOH H 94 442 442 HOH HOH . F 5 HOH H 95 443 443 HOH HOH . F 5 HOH H 96 453 453 HOH HOH . F 5 HOH H 97 456 456 HOH HOH . F 5 HOH H 98 459 459 HOH HOH . F 5 HOH H 99 461 461 HOH HOH . F 5 HOH H 100 463 463 HOH HOH . F 5 HOH H 101 464 464 HOH HOH . F 5 HOH H 102 466 466 HOH HOH . F 5 HOH H 103 467 467 HOH HOH . F 5 HOH H 104 468 468 HOH HOH . F 5 HOH H 105 469 469 HOH HOH . F 5 HOH H 106 471 471 HOH HOH . F 5 HOH H 107 472 472 HOH HOH . F 5 HOH H 108 473 473 HOH HOH . F 5 HOH H 109 474 474 HOH HOH . F 5 HOH H 110 475 475 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S 81A . . . D 4 20.806 -18.369 24.307 1 51.87 ? S 81A 4815 H 1 HETATM 2 O O4 81A . . . D 4 22.093 -18.901 24.002 1 57.15 ? O4 81A 4815 H 1 HETATM 3 O O5 81A . . . D 4 19.88 -18.349 23.219 1 54.35 ? O5 81A 4815 H 1 HETATM 4 C C16 81A . . . D 4 20.119 -19.305 25.658 1 56.73 ? C16 81A 4815 H 1 HETATM 5 C C26 81A . . . D 4 20.062 -15.898 25.386 1 52.09 ? C26 81A 4815 H 1 HETATM 6 C C25 81A . . . D 4 20.386 -14.673 25.968 1 52.59 ? C25 81A 4815 H 1 HETATM 7 C C24 81A . . . D 4 21.702 -14.364 26.297 1 55.3 ? C24 81A 4815 H 1 HETATM 8 C C23 81A . . . D 4 22.707 -15.291 26.023 1 57.98 ? C23 81A 4815 H 1 HETATM 9 C C28 81A . . . D 4 22.418 -16.52 25.434 1 56.45 ? C28 81A 4815 H 1 HETATM 10 C C27 81A . . . D 4 21.113 -16.821 25.105 1 54.9 ? C27 81A 4815 H 1 HETATM 11 C C2 81A . . . D 4 18.586 -13.415 21.185 1 53.12 ? C2 81A 4815 H 1 HETATM 12 C C2A 81A . . . D 4 19.671 -12.741 20.414 1 55.49 ? C2A 81A 4815 H 1 HETATM 13 C C6 81A . . . D 4 17.874 -15.208 22.645 1 51.98 ? C6 81A 4815 H 1 HETATM 14 C C1 81A . . . D 4 18.876 -14.571 21.895 1 52.36 ? C1 81A 4815 H 1 HETATM 15 C C3 81A . . . D 4 17.277 -12.871 21.208 1 53.25 ? C3 81A 4815 H 1 HETATM 16 C C5 81A . . . D 4 16.567 -14.673 22.67 1 52.48 ? C5 81A 4815 H 1 HETATM 17 C C4 81A . . . D 4 16.26 -13.5 21.969 1 50.48 ? C4 81A 4815 H 1 HETATM 18 O O8 81A . . . D 4 18.162 -16.357 23.368 1 51.92 ? O8 81A 4815 H 1 HETATM 19 S S20 81A . . . D 4 18.296 -16.285 24.95 1 46.04 ? S20 81A 4815 H 1 HETATM 20 O O21 81A . . . D 4 17.726 -17.482 25.521 1 46.75 ? O21 81A 4815 H 1 HETATM 21 O O22 81A . . . D 4 17.565 -15.16 25.469 1 51.52 ? O22 81A 4815 H 1 HETATM 22 O O7 81A . . . D 4 14.962 -12.992 22.045 1 48.76 ? O7 81A 4815 H 1 HETATM 23 C C10 81A . . . D 4 14.454 -12.431 20.802 1 47.33 ? C10 81A 4815 H 1 HETATM 24 C C14 81A . . . D 4 13.19 -11.583 21.044 1 48.43 ? C14 81A 4815 H 1 HETATM 25 C CEA 81A . . . D 4 11.769 -12.124 20.723 1 49.45 ? CEA 81A 4815 H 1 HETATM 26 C CEB 81A . . . D 4 12.407 -11.027 19.841 1 49.23 ? CEB 81A 4815 H 1 HETATM 27 C C15 81A . . . D 4 13.13 -10.671 22.258 1 48.94 ? C15 81A 4815 H 1 HETATM 28 O O16 81A . . . D 4 13.22 -11.271 23.54 1 45.76 ? O16 81A 4815 H 1 HETATM 29 N N10 81A . . . D 4 12.374 -12.22 23.704 1 44.6 ? N10 81A 4815 H 1 HETATM 30 C C17 81A . . . D 4 11.28 -12.016 24.418 1 44.31 ? C17 81A 4815 H 1 HETATM 31 N N11 81A . . . D 4 10.377 -12.944 24.524 1 44.1 ? N11 81A 4815 H 1 HETATM 32 N N12 81A . . . D 4 11.114 -10.848 25.062 1 43.65 ? N12 81A 4815 H 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 46 _model_server_stats.query_time_ms 381 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 32 #