data_1T4V # _model_server_result.job_id H_n-ZCiCUVvn2wpstSrvKw _model_server_result.datetime_utc '2024-11-22 04:15:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1t4v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1411}' # _entry.id 1T4V # _exptl.entry_id 1T4V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 394.896 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-ALLYL-5-AMIDINOAMINOOXY-PROPYLOXY-3-CHLORO-N-CYCLOPENTYLBENZAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.52 _cell.angle_gamma 90 _cell.entry_id 1T4V _cell.length_a 70.97 _cell.length_b 71.75 _cell.length_c 72.82 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T4V _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 L CYS 9 1_555 B SG CYS 119 H CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 B SG CYS 28 H CYS 64 1_555 B SG CYS 44 H CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 B SG CYS 173 H CYS 203 1_555 B SG CYS 187 H CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf4 B SG CYS 201 H CYS 231 1_555 B SG CYS 231 H CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? covale ? covale1 C C GLU 8 I GLU 297 1_555 C N TYS 9 I TYS 298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 C C TYS 9 I TYS 298 1_555 C N LEU 10 I LEU 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C19 H27 Cl N4 O3' _chem_comp.formula_weight 394.896 _chem_comp.id 14A _chem_comp.mon_nstd_flag . _chem_comp.name N-ALLYL-5-AMIDINOAMINOOXY-PROPYLOXY-3-CHLORO-N-CYCLOPENTYLBENZAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 14A doub 1 n n N1 HN1 14A sing 2 n n C2 N3 14A sing 3 n n C2 N4 14A sing 4 n n N3 HN31 14A sing 5 n n N3 HN32 14A sing 6 n n N4 O5 14A sing 7 n n N4 HN4 14A sing 8 n n O5 C6 14A sing 9 n n C6 C7 14A sing 10 n n C6 H61 14A sing 11 n n C6 H62 14A sing 12 n n C7 C8 14A sing 13 n n C7 H71 14A sing 14 n n C7 H72 14A sing 15 n n C8 O9 14A sing 16 n n C8 H81 14A sing 17 n n C8 H82 14A sing 18 n n O9 C10 14A sing 19 n n C10 C11 14A doub 20 n y C10 C15 14A sing 21 n y C11 C12 14A sing 22 n y C11 H11 14A sing 23 n n C12 C13 14A doub 24 n y C12 CL16 14A sing 25 n n C13 C14 14A sing 26 n y C13 H13 14A sing 27 n n C14 C15 14A doub 28 n y C14 C17 14A sing 29 n n C15 H15 14A sing 30 n n C17 O18 14A doub 31 n n C17 N19 14A sing 32 n n N19 C20 14A sing 33 n n N19 C23 14A sing 34 n n C20 C21 14A sing 35 n n C20 H201 14A sing 36 n n C20 H202 14A sing 37 n n C21 C22 14A doub 38 n n C21 H21 14A sing 39 n n C22 H221 14A sing 40 n n C22 H222 14A sing 41 n n C23 C24 14A sing 42 n n C23 C27 14A sing 43 n n C23 H23 14A sing 44 n n C24 C25 14A sing 45 n n C24 H241 14A sing 46 n n C24 H242 14A sing 47 n n C25 C26 14A sing 48 n n C25 H251 14A sing 49 n n C25 H252 14A sing 50 n n C26 C27 14A sing 51 n n C26 H261 14A sing 52 n n C26 H262 14A sing 53 n n C27 H271 14A sing 54 n n C27 H272 14A sing 55 n n # _atom_sites.entry_id 1T4V _atom_sites.fract_transf_matrix[1][1] 0.01409 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002617 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013937 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013967 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 14A H 1 1411 1411 14A 14A . E 5 HOH L 1 311 311 HOH HOH . E 5 HOH L 2 329 329 HOH HOH . E 5 HOH L 3 330 330 HOH HOH . E 5 HOH L 4 331 331 HOH HOH . E 5 HOH L 5 372 372 HOH HOH . E 5 HOH L 6 380 380 HOH HOH . E 5 HOH L 7 397 397 HOH HOH . E 5 HOH L 8 423 423 HOH HOH . E 5 HOH L 9 424 424 HOH HOH . E 5 HOH L 10 452 452 HOH HOH . F 5 HOH H 1 301 301 HOH HOH . F 5 HOH H 2 302 302 HOH HOH . F 5 HOH H 3 303 303 HOH HOH . F 5 HOH H 4 304 304 HOH HOH . F 5 HOH H 5 305 305 HOH HOH . F 5 HOH H 6 306 306 HOH HOH . F 5 HOH H 7 307 307 HOH HOH . F 5 HOH H 8 308 308 HOH HOH . F 5 HOH H 9 309 309 HOH HOH . F 5 HOH H 10 310 310 HOH HOH . F 5 HOH H 11 312 312 HOH HOH . F 5 HOH H 12 313 313 HOH HOH . F 5 HOH H 13 314 314 HOH HOH . F 5 HOH H 14 315 315 HOH HOH . F 5 HOH H 15 316 316 HOH HOH . F 5 HOH H 16 318 318 HOH HOH . F 5 HOH H 17 319 319 HOH HOH . F 5 HOH H 18 320 320 HOH HOH . F 5 HOH H 19 321 321 HOH HOH . F 5 HOH H 20 322 322 HOH HOH . F 5 HOH H 21 324 324 HOH HOH . F 5 HOH H 22 325 325 HOH HOH . F 5 HOH H 23 327 327 HOH HOH . F 5 HOH H 24 328 328 HOH HOH . F 5 HOH H 25 332 332 HOH HOH . F 5 HOH H 26 333 333 HOH HOH . F 5 HOH H 27 334 334 HOH HOH . F 5 HOH H 28 335 335 HOH HOH . F 5 HOH H 29 336 336 HOH HOH . F 5 HOH H 30 337 337 HOH HOH . F 5 HOH H 31 339 339 HOH HOH . F 5 HOH H 32 340 340 HOH HOH . F 5 HOH H 33 341 341 HOH HOH . F 5 HOH H 34 342 342 HOH HOH . F 5 HOH H 35 343 343 HOH HOH . F 5 HOH H 36 345 345 HOH HOH . F 5 HOH H 37 348 348 HOH HOH . F 5 HOH H 38 350 350 HOH HOH . F 5 HOH H 39 351 351 HOH HOH . F 5 HOH H 40 355 355 HOH HOH . F 5 HOH H 41 356 356 HOH HOH . F 5 HOH H 42 357 357 HOH HOH . F 5 HOH H 43 358 358 HOH HOH . F 5 HOH H 44 360 360 HOH HOH . F 5 HOH H 45 361 361 HOH HOH . F 5 HOH H 46 362 362 HOH HOH . F 5 HOH H 47 363 363 HOH HOH . F 5 HOH H 48 364 364 HOH HOH . F 5 HOH H 49 365 365 HOH HOH . F 5 HOH H 50 366 366 HOH HOH . F 5 HOH H 51 368 368 HOH HOH . F 5 HOH H 52 369 369 HOH HOH . F 5 HOH H 53 373 373 HOH HOH . F 5 HOH H 54 374 374 HOH HOH . F 5 HOH H 55 376 376 HOH HOH . F 5 HOH H 56 377 377 HOH HOH . F 5 HOH H 57 383 383 HOH HOH . F 5 HOH H 58 385 385 HOH HOH . F 5 HOH H 59 388 388 HOH HOH . F 5 HOH H 60 389 389 HOH HOH . F 5 HOH H 61 393 393 HOH HOH . F 5 HOH H 62 394 394 HOH HOH . F 5 HOH H 63 400 400 HOH HOH . F 5 HOH H 64 402 402 HOH HOH . F 5 HOH H 65 403 403 HOH HOH . F 5 HOH H 66 404 404 HOH HOH . F 5 HOH H 67 405 405 HOH HOH . F 5 HOH H 68 407 407 HOH HOH . F 5 HOH H 69 410 410 HOH HOH . F 5 HOH H 70 411 411 HOH HOH . F 5 HOH H 71 412 412 HOH HOH . F 5 HOH H 72 413 413 HOH HOH . F 5 HOH H 73 414 414 HOH HOH . F 5 HOH H 74 415 415 HOH HOH . F 5 HOH H 75 422 422 HOH HOH . F 5 HOH H 76 425 425 HOH HOH . F 5 HOH H 77 426 426 HOH HOH . F 5 HOH H 78 428 428 HOH HOH . F 5 HOH H 79 429 429 HOH HOH . F 5 HOH H 80 430 430 HOH HOH . F 5 HOH H 81 431 431 HOH HOH . F 5 HOH H 82 436 436 HOH HOH . F 5 HOH H 83 438 438 HOH HOH . F 5 HOH H 84 439 439 HOH HOH . F 5 HOH H 85 440 440 HOH HOH . F 5 HOH H 86 443 443 HOH HOH . F 5 HOH H 87 453 453 HOH HOH . F 5 HOH H 88 456 456 HOH HOH . F 5 HOH H 89 459 459 HOH HOH . F 5 HOH H 90 461 461 HOH HOH . F 5 HOH H 91 466 466 HOH HOH . F 5 HOH H 92 501 501 HOH HOH . F 5 HOH H 93 502 502 HOH HOH . F 5 HOH H 94 503 503 HOH HOH . F 5 HOH H 95 504 504 HOH HOH . F 5 HOH H 96 505 505 HOH HOH . F 5 HOH H 97 506 506 HOH HOH . F 5 HOH H 98 507 507 HOH HOH . F 5 HOH H 99 508 508 HOH HOH . F 5 HOH H 100 509 509 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 14A . . . D 4 10.221 -12.942 24.494 1 19.1 ? N1 14A 1411 H 1 HETATM 2 C C2 14A . . . D 4 11.038 -11.963 24.139 1 18.11 ? C2 14A 1411 H 1 HETATM 3 N N3 14A . . . D 4 10.899 -10.742 24.642 1 19.15 ? N3 14A 1411 H 1 HETATM 4 N N4 14A . . . D 4 11.95 -12.18 23.223 1 16.67 ? N4 14A 1411 H 1 HETATM 5 O O5 14A . . . D 4 12.932 -11.315 22.941 1 20.9 ? O5 14A 1411 H 1 HETATM 6 C C6 14A . . . D 4 12.875 -10.733 21.619 1 21.28 ? C6 14A 1411 H 1 HETATM 7 C C7 14A . . . D 4 13.439 -11.716 20.568 1 20.66 ? C7 14A 1411 H 1 HETATM 8 C C8 14A . . . D 4 14.937 -11.908 20.676 1 18.83 ? C8 14A 1411 H 1 HETATM 9 O O9 14A . . . D 4 15.153 -12.945 21.627 1 21.53 ? O9 14A 1411 H 1 HETATM 10 C C10 14A . . . D 4 16.431 -13.482 21.642 1 19.87 ? C10 14A 1411 H 1 HETATM 11 C C11 14A . . . D 4 17.466 -12.973 20.841 1 22.39 ? C11 14A 1411 H 1 HETATM 12 C C12 14A . . . D 4 18.75 -13.569 20.911 1 21.65 ? C12 14A 1411 H 1 HETATM 13 C C13 14A . . . D 4 18.968 -14.625 21.74 1 22.02 ? C13 14A 1411 H 1 HETATM 14 C C14 14A . . . D 4 17.968 -15.109 22.525 1 23.12 ? C14 14A 1411 H 1 HETATM 15 C C15 14A . . . D 4 16.701 -14.566 22.486 1 21.72 ? C15 14A 1411 H 1 HETATM 16 CL CL16 14A . . . D 4 20.038 -12.982 19.978 1 28.11 ? CL16 14A 1411 H 1 HETATM 17 C C17 14A . . . D 4 18.257 -16.27 23.398 1 28.89 ? C17 14A 1411 H 1 HETATM 18 O O18 14A . . . D 4 17.459 -17.203 23.297 1 29.03 ? O18 14A 1411 H 1 HETATM 19 N N19 14A . . . D 4 19.256 -16.348 24.308 1 31.3 ? N19 14A 1411 H 1 HETATM 20 C C20 14A . . . D 4 19.299 -17.503 25.269 1 33.05 ? C20 14A 1411 H 1 HETATM 21 C C21 14A . . . D 4 18.034 -17.851 26.068 1 33.89 ? C21 14A 1411 H 1 HETATM 22 C C22 14A . . . D 4 18.023 -18.32 27.302 1 36.43 ? C22 14A 1411 H 1 HETATM 23 C C23 14A . . . D 4 19.783 -15.007 24.668 1 29.13 ? C23 14A 1411 H 1 HETATM 24 C C24 14A . . . D 4 21.305 -15.149 24.549 1 28.95 ? C24 14A 1411 H 1 HETATM 25 C C25 14A . . . D 4 21.979 -14.542 25.718 1 27.76 ? C25 14A 1411 H 1 HETATM 26 C C26 14A . . . D 4 20.915 -14.431 26.797 1 27.93 ? C26 14A 1411 H 1 HETATM 27 C C27 14A . . . D 4 19.623 -14.914 26.187 1 27.36 ? C27 14A 1411 H 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 27 #