data_1T67 # _model_server_result.job_id RwIj1dCPNK3zVy8_TDIUkw _model_server_result.datetime_utc '2024-11-23 23:39:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1t67 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":379}' # _entry.id 1T67 # _exptl.entry_id 1T67 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1T67 _cell.length_a 80.644 _cell.length_b 80.644 _cell.length_c 105.523 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T67 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 176 A ASP 176 1_555 C NA NA . A NA 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc2 A O ASP 176 A ASP 176 1_555 C NA NA . A NA 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.146 ? metalc ? metalc3 A OD2 ASP 178 A ASP 178 1_555 B ZN ZN . A ZN 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc4 A O ASP 178 A ASP 178 1_555 C NA NA . A NA 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.819 ? metalc ? metalc5 A ND1 HIS 180 A HIS 180 1_555 B ZN ZN . A ZN 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc6 A O HIS 180 A HIS 180 1_555 C NA NA . A NA 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? metalc ? metalc7 A O PHE 189 A PHE 189 1_555 D NA NA . A NA 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc8 A O THR 192 A THR 192 1_555 D NA NA . A NA 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? metalc ? metalc9 A O VAL 195 A VAL 195 1_555 D NA NA . A NA 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc10 A OG SER 199 A SER 199 1_555 C NA NA . A NA 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.956 ? metalc ? metalc11 A O LEU 200 A LEU 200 1_555 C NA NA . A NA 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.745 ? metalc ? metalc12 A OD2 ASP 267 A ASP 267 1_555 B ZN ZN . A ZN 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc13 B ZN ZN . A ZN 378 1_555 E O4 B3N . A B3N 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc14 B ZN ZN . A ZN 378 1_555 E N3 B3N . A B3N 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.645 ? metalc ? metalc15 B ZN ZN . A ZN 378 1_555 E O2 B3N . A B3N 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc16 D NA NA . A NA 380 1_555 F O HOH . A HOH 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.112 ? metalc ? metalc17 D NA NA . A NA 380 1_555 F O HOH . A HOH 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1T67 _atom_sites.fract_transf_matrix[1][1] 0.0124 _atom_sites.fract_transf_matrix[1][2] 0.007159 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014318 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009477 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 378 378 ZN ZN . C 3 NA A 1 379 379 NA NA . D 3 NA A 1 380 380 NA NA . E 4 B3N A 1 381 381 B3N B3N . F 5 HOH A 1 382 382 HOH HOH . F 5 HOH A 2 383 383 HOH HOH . F 5 HOH A 3 384 384 HOH HOH . F 5 HOH A 4 385 385 HOH HOH . F 5 HOH A 5 386 386 HOH HOH . F 5 HOH A 6 387 387 HOH HOH . F 5 HOH A 7 388 388 HOH HOH . F 5 HOH A 8 389 389 HOH HOH . F 5 HOH A 9 390 390 HOH HOH . F 5 HOH A 10 391 391 HOH HOH . F 5 HOH A 11 392 392 HOH HOH . F 5 HOH A 12 393 393 HOH HOH . F 5 HOH A 13 394 394 HOH HOH . F 5 HOH A 14 395 395 HOH HOH . F 5 HOH A 15 396 396 HOH HOH . F 5 HOH A 16 397 397 HOH HOH . F 5 HOH A 17 398 398 HOH HOH . F 5 HOH A 18 399 399 HOH HOH . F 5 HOH A 19 400 400 HOH HOH . F 5 HOH A 20 401 401 HOH HOH . F 5 HOH A 21 402 402 HOH HOH . F 5 HOH A 22 403 403 HOH HOH . F 5 HOH A 23 404 404 HOH HOH . F 5 HOH A 24 405 405 HOH HOH . F 5 HOH A 25 406 406 HOH HOH . F 5 HOH A 26 407 407 HOH HOH . F 5 HOH A 27 408 408 HOH HOH . F 5 HOH A 28 409 409 HOH HOH . F 5 HOH A 29 410 410 HOH HOH . F 5 HOH A 30 411 411 HOH HOH . F 5 HOH A 31 412 412 HOH HOH . F 5 HOH A 32 413 413 HOH HOH . F 5 HOH A 33 414 414 HOH HOH . F 5 HOH A 34 415 415 HOH HOH . F 5 HOH A 35 416 416 HOH HOH . F 5 HOH A 36 417 417 HOH HOH . F 5 HOH A 37 418 418 HOH HOH . F 5 HOH A 38 419 419 HOH HOH . F 5 HOH A 39 420 420 HOH HOH . F 5 HOH A 40 421 421 HOH HOH . F 5 HOH A 41 422 422 HOH HOH . F 5 HOH A 42 423 423 HOH HOH . F 5 HOH A 43 424 424 HOH HOH . F 5 HOH A 44 425 425 HOH HOH . F 5 HOH A 45 426 426 HOH HOH . F 5 HOH A 46 427 427 HOH HOH . F 5 HOH A 47 428 428 HOH HOH . F 5 HOH A 48 429 429 HOH HOH . F 5 HOH A 49 430 430 HOH HOH . F 5 HOH A 50 431 431 HOH HOH . F 5 HOH A 51 432 432 HOH HOH . F 5 HOH A 52 433 433 HOH HOH . F 5 HOH A 53 434 434 HOH HOH . F 5 HOH A 54 435 435 HOH HOH . F 5 HOH A 55 436 436 HOH HOH . F 5 HOH A 56 437 437 HOH HOH . F 5 HOH A 57 438 438 HOH HOH . F 5 HOH A 58 439 439 HOH HOH . F 5 HOH A 59 440 440 HOH HOH . F 5 HOH A 60 441 441 HOH HOH . F 5 HOH A 61 442 442 HOH HOH . F 5 HOH A 62 443 443 HOH HOH . F 5 HOH A 63 444 444 HOH HOH . F 5 HOH A 64 445 445 HOH HOH . F 5 HOH A 65 446 446 HOH HOH . F 5 HOH A 66 447 447 HOH HOH . F 5 HOH A 67 448 448 HOH HOH . F 5 HOH A 68 449 449 HOH HOH . F 5 HOH A 69 450 450 HOH HOH . F 5 HOH A 70 451 451 HOH HOH . F 5 HOH A 71 452 452 HOH HOH . F 5 HOH A 72 453 453 HOH HOH . F 5 HOH A 73 454 454 HOH HOH . F 5 HOH A 74 455 455 HOH HOH . F 5 HOH A 75 456 456 HOH HOH . F 5 HOH A 76 457 457 HOH HOH . F 5 HOH A 77 458 458 HOH HOH . F 5 HOH A 78 459 459 HOH HOH . F 5 HOH A 79 460 460 HOH HOH . F 5 HOH A 80 461 461 HOH HOH . F 5 HOH A 81 462 462 HOH HOH . F 5 HOH A 82 463 463 HOH HOH . F 5 HOH A 83 464 464 HOH HOH . F 5 HOH A 84 465 465 HOH HOH . F 5 HOH A 85 466 466 HOH HOH . F 5 HOH A 86 467 467 HOH HOH . F 5 HOH A 87 468 468 HOH HOH . F 5 HOH A 88 469 469 HOH HOH . F 5 HOH A 89 470 470 HOH HOH . F 5 HOH A 90 471 471 HOH HOH . F 5 HOH A 91 472 472 HOH HOH . F 5 HOH A 92 473 473 HOH HOH . F 5 HOH A 93 474 474 HOH HOH . F 5 HOH A 94 475 475 HOH HOH . F 5 HOH A 95 476 476 HOH HOH . F 5 HOH A 96 477 477 HOH HOH . F 5 HOH A 97 478 478 HOH HOH . F 5 HOH A 98 479 479 HOH HOH . F 5 HOH A 99 480 480 HOH HOH . F 5 HOH A 100 481 481 HOH HOH . F 5 HOH A 101 482 482 HOH HOH . F 5 HOH A 102 483 483 HOH HOH . F 5 HOH A 103 484 484 HOH HOH . F 5 HOH A 104 485 485 HOH HOH . F 5 HOH A 105 486 486 HOH HOH . F 5 HOH A 106 487 487 HOH HOH . F 5 HOH A 107 488 488 HOH HOH . F 5 HOH A 108 489 489 HOH HOH . F 5 HOH A 109 490 490 HOH HOH . F 5 HOH A 110 491 491 HOH HOH . F 5 HOH A 111 492 492 HOH HOH . F 5 HOH A 112 493 493 HOH HOH . F 5 HOH A 113 494 494 HOH HOH . F 5 HOH A 114 495 495 HOH HOH . F 5 HOH A 115 496 496 HOH HOH . F 5 HOH A 116 497 497 HOH HOH . F 5 HOH A 117 498 498 HOH HOH . F 5 HOH A 118 499 499 HOH HOH . F 5 HOH A 119 500 500 HOH HOH . F 5 HOH A 120 501 501 HOH HOH . F 5 HOH A 121 502 502 HOH HOH . F 5 HOH A 122 503 503 HOH HOH . F 5 HOH A 123 504 504 HOH HOH . F 5 HOH A 124 505 505 HOH HOH . F 5 HOH A 125 506 506 HOH HOH . F 5 HOH A 126 507 507 HOH HOH . F 5 HOH A 127 508 508 HOH HOH . F 5 HOH A 128 509 509 HOH HOH . F 5 HOH A 129 510 510 HOH HOH . F 5 HOH A 130 511 511 HOH HOH . F 5 HOH A 131 512 512 HOH HOH . F 5 HOH A 132 513 513 HOH HOH . F 5 HOH A 133 514 514 HOH HOH . F 5 HOH A 134 515 515 HOH HOH . F 5 HOH A 135 516 516 HOH HOH . F 5 HOH A 136 517 517 HOH HOH . F 5 HOH A 137 518 518 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 57.44 _atom_site.Cartn_y -2.504 _atom_site.Cartn_z 20.084 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 61.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 379 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #