data_1T6Y # _model_server_result.job_id pWYQ3JiaKR6eFCPSW0uOlA _model_server_result.datetime_utc '2025-02-27 11:40:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1t6y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":296}' # _entry.id 1T6Y # _exptl.entry_id 1T6Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.42 _cell.angle_gamma 90 _cell.entry_id 1T6Y _cell.length_a 67.803 _cell.length_b 82.661 _cell.length_c 66.717 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T6Y _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 153 n n N1 C10 FMN doub 154 n n C2 O2 FMN doub 155 n n C2 N3 FMN sing 156 n n N3 C4 FMN sing 157 n n N3 HN3 FMN sing 158 n n C4 O4 FMN doub 159 n n C4 C4A FMN sing 160 n n C4A N5 FMN doub 161 n n C4A C10 FMN sing 162 n n N5 C5A FMN sing 163 n n C5A C6 FMN doub 164 n y C5A C9A FMN sing 165 n y C6 C7 FMN sing 166 n y C6 H6 FMN sing 167 n n C7 C7M FMN sing 168 n n C7 C8 FMN doub 169 n y C7M HM71 FMN sing 170 n n C7M HM72 FMN sing 171 n n C7M HM73 FMN sing 172 n n C8 C8M FMN sing 173 n n C8 C9 FMN sing 174 n y C8M HM81 FMN sing 175 n n C8M HM82 FMN sing 176 n n C8M HM83 FMN sing 177 n n C9 C9A FMN doub 178 n y C9 H9 FMN sing 179 n n C9A N10 FMN sing 180 n n N10 C10 FMN sing 181 n n N10 C1' FMN sing 182 n n C1' C2' FMN sing 183 n n C1' "H1'1" FMN sing 184 n n C1' "H1'2" FMN sing 185 n n C2' O2' FMN sing 186 n n C2' C3' FMN sing 187 n n C2' H2' FMN sing 188 n n O2' HO2' FMN sing 189 n n C3' O3' FMN sing 190 n n C3' C4' FMN sing 191 n n C3' H3' FMN sing 192 n n O3' HO3' FMN sing 193 n n C4' O4' FMN sing 194 n n C4' C5' FMN sing 195 n n C4' H4' FMN sing 196 n n O4' HO4' FMN sing 197 n n C5' O5' FMN sing 198 n n C5' "H5'1" FMN sing 199 n n C5' "H5'2" FMN sing 200 n n O5' P FMN sing 201 n n P O1P FMN doub 202 n n P O2P FMN sing 203 n n P O3P FMN sing 204 n n O2P HOP2 FMN sing 205 n n O3P HOP3 FMN sing 206 n n # _atom_sites.entry_id 1T6Y _atom_sites.fract_transf_matrix[1][1] 0.014749 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007328 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012098 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016737 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ADP A 1 294 294 ADP ADP . D 3 AMP A 1 295 295 AMP AMP . E 4 FMN A 1 296 296 FMN FMN . F 2 ADP B 1 594 594 ADP ADP . G 3 AMP B 1 595 595 AMP AMP . H 4 FMN B 1 596 596 FMN FMN . I 5 HOH A 1 601 601 HOH HOH . I 5 HOH A 2 602 602 HOH HOH . I 5 HOH A 3 603 603 HOH HOH . I 5 HOH A 4 608 608 HOH HOH . I 5 HOH A 5 609 609 HOH HOH . I 5 HOH A 6 610 610 HOH HOH . I 5 HOH A 7 611 611 HOH HOH . I 5 HOH A 8 617 617 HOH HOH . I 5 HOH A 9 619 619 HOH HOH . I 5 HOH A 10 621 621 HOH HOH . I 5 HOH A 11 622 622 HOH HOH . I 5 HOH A 12 623 623 HOH HOH . I 5 HOH A 13 624 624 HOH HOH . I 5 HOH A 14 625 625 HOH HOH . I 5 HOH A 15 627 627 HOH HOH . I 5 HOH A 16 628 628 HOH HOH . I 5 HOH A 17 630 630 HOH HOH . I 5 HOH A 18 631 631 HOH HOH . J 5 HOH B 1 604 604 HOH HOH . J 5 HOH B 2 605 605 HOH HOH . J 5 HOH B 3 606 606 HOH HOH . J 5 HOH B 4 607 607 HOH HOH . J 5 HOH B 5 612 612 HOH HOH . J 5 HOH B 6 613 613 HOH HOH . J 5 HOH B 7 614 614 HOH HOH . J 5 HOH B 8 615 615 HOH HOH . J 5 HOH B 9 616 616 HOH HOH . J 5 HOH B 10 618 618 HOH HOH . J 5 HOH B 11 620 620 HOH HOH . J 5 HOH B 12 626 626 HOH HOH . J 5 HOH B 13 629 629 HOH HOH . J 5 HOH B 14 632 632 HOH HOH . J 5 HOH B 15 633 633 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . E 4 36.805 -5.094 26.345 1 83.63 ? N1 FMN 296 A 1 HETATM 2 C C2 FMN . . . E 4 36.217 -5.572 27.46 1 83.59 ? C2 FMN 296 A 1 HETATM 3 O O2 FMN . . . E 4 36.139 -5.038 28.567 1 86.04 ? O2 FMN 296 A 1 HETATM 4 N N3 FMN . . . E 4 35.564 -6.903 27.395 1 82.26 ? N3 FMN 296 A 1 HETATM 5 C C4 FMN . . . E 4 35.531 -7.677 26.196 1 81.68 ? C4 FMN 296 A 1 HETATM 6 O O4 FMN . . . E 4 34.949 -8.77 26.301 1 77.52 ? O4 FMN 296 A 1 HETATM 7 C C4A FMN . . . E 4 36.141 -7.108 25.094 1 82.48 ? C4A FMN 296 A 1 HETATM 8 N N5 FMN . . . E 4 36.112 -7.768 24.002 1 83.23 ? N5 FMN 296 A 1 HETATM 9 C C5A FMN . . . E 4 36.707 -7.247 22.836 1 83.27 ? C5A FMN 296 A 1 HETATM 10 C C6 FMN . . . E 4 36.686 -7.943 21.6 1 84.01 ? C6 FMN 296 A 1 HETATM 11 C C7 FMN . . . E 4 37.315 -7.356 20.428 1 85.38 ? C7 FMN 296 A 1 HETATM 12 C C7M FMN . . . E 4 37.137 -8.309 19.248 1 85.17 ? C7M FMN 296 A 1 HETATM 13 C C8 FMN . . . E 4 37.979 -6.046 20.518 1 84.5 ? C8 FMN 296 A 1 HETATM 14 C C8M FMN . . . E 4 38.606 -5.483 19.314 1 84.65 ? C8M FMN 296 A 1 HETATM 15 C C9 FMN . . . E 4 38.003 -5.369 21.721 1 82.78 ? C9 FMN 296 A 1 HETATM 16 C C9A FMN . . . E 4 37.369 -5.922 22.942 1 83.32 ? C9A FMN 296 A 1 HETATM 17 N N10 FMN . . . E 4 37.442 -5.177 24.081 1 86.05 ? N10 FMN 296 A 1 HETATM 18 C C10 FMN . . . E 4 36.827 -5.73 25.174 1 84.05 ? C10 FMN 296 A 1 HETATM 19 C C1' FMN . . . E 4 38.122 -3.876 24.218 1 94.36 ? C1' FMN 296 A 1 HETATM 20 C C2' FMN . . . E 4 37.465 -2.636 24.727 1 100.92 ? C2' FMN 296 A 1 HETATM 21 O O2' FMN . . . E 4 36.392 -2.317 23.882 1 102.85 ? O2' FMN 296 A 1 HETATM 22 C C3' FMN . . . E 4 38.614 -1.664 24.666 1 106.02 ? C3' FMN 296 A 1 HETATM 23 O O3' FMN . . . E 4 39.161 -1.479 26.006 1 106.85 ? O3' FMN 296 A 1 HETATM 24 C C4' FMN . . . E 4 38.382 -0.207 24.177 1 111.25 ? C4' FMN 296 A 1 HETATM 25 O O4' FMN . . . E 4 39.595 0.515 24.198 1 112 ? O4' FMN 296 A 1 HETATM 26 C C5' FMN . . . E 4 37.281 0.645 24.9 1 115.44 ? C5' FMN 296 A 1 HETATM 27 O O5' FMN . . . E 4 37.168 0.19 26.276 1 120.37 ? O5' FMN 296 A 1 HETATM 28 P P FMN . . . E 4 37.445 1.262 27.4 1 123.62 ? P FMN 296 A 1 HETATM 29 O O1P FMN . . . E 4 37.237 0.47 28.734 1 123.11 ? O1P FMN 296 A 1 HETATM 30 O O2P FMN . . . E 4 38.869 1.72 27.274 1 123.42 ? O2P FMN 296 A 1 HETATM 31 O O3P FMN . . . E 4 36.401 2.407 27.282 1 122.26 ? O3P FMN 296 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #