data_1T8A # _model_server_result.job_id Vu52dn-JArRlTnMJKKh8jA _model_server_result.datetime_utc '2024-11-13 00:17:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1t8a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":900}' # _entry.id 1T8A # _exptl.entry_id 1T8A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-HYDROXYETHYL DISULFIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1T8A _cell.length_a 60.401 _cell.length_b 60.401 _cell.length_c 96.19 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T8A _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id HED _chem_comp.mon_nstd_flag . _chem_comp.name '2-HYDROXYETHYL DISULFIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HED sing 137 n n C1 C2 HED sing 138 n n C1 H11 HED sing 139 n n C1 H12 HED sing 140 n n O1 HO1 HED sing 141 n n C2 S3 HED sing 142 n n C2 H21 HED sing 143 n n C2 H22 HED sing 144 n n S3 S4 HED sing 145 n n S4 C5 HED sing 146 n n C5 C6 HED sing 147 n n C5 H51 HED sing 148 n n C5 H52 HED sing 149 n n C6 O6 HED sing 150 n n C6 H61 HED sing 151 n n C6 H62 HED sing 152 n n O6 HO6 HED sing 153 n n # _atom_sites.entry_id 1T8A _atom_sites.fract_transf_matrix[1][1] 0.016556 _atom_sites.fract_transf_matrix[1][2] 0.009559 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019117 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010396 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 500 500 CL CL . C 3 GAI A 1 300 300 GAI GAI . D 4 HED A 1 900 900 HED HED . E 5 HOH A 1 401 401 HOH HOH . E 5 HOH A 2 402 402 HOH HOH . E 5 HOH A 3 403 403 HOH HOH . E 5 HOH A 4 404 404 HOH HOH . E 5 HOH A 5 405 405 HOH HOH . E 5 HOH A 6 406 406 HOH HOH . E 5 HOH A 7 407 407 HOH HOH . E 5 HOH A 8 408 408 HOH HOH . E 5 HOH A 9 409 409 HOH HOH . E 5 HOH A 10 410 410 HOH HOH . E 5 HOH A 11 411 411 HOH HOH . E 5 HOH A 12 412 412 HOH HOH . E 5 HOH A 13 413 413 HOH HOH . E 5 HOH A 14 414 414 HOH HOH . E 5 HOH A 15 415 415 HOH HOH . E 5 HOH A 16 416 416 HOH HOH . E 5 HOH A 17 417 417 HOH HOH . E 5 HOH A 18 418 418 HOH HOH . E 5 HOH A 19 419 419 HOH HOH . E 5 HOH A 20 420 420 HOH HOH . E 5 HOH A 21 421 421 HOH HOH . E 5 HOH A 22 422 422 HOH HOH . E 5 HOH A 23 423 423 HOH HOH . E 5 HOH A 24 424 424 HOH HOH . E 5 HOH A 25 425 425 HOH HOH . E 5 HOH A 26 426 426 HOH HOH . E 5 HOH A 27 427 427 HOH HOH . E 5 HOH A 28 428 428 HOH HOH . E 5 HOH A 29 429 429 HOH HOH . E 5 HOH A 30 430 430 HOH HOH . E 5 HOH A 31 431 431 HOH HOH . E 5 HOH A 32 432 432 HOH HOH . E 5 HOH A 33 433 433 HOH HOH . E 5 HOH A 34 434 434 HOH HOH . E 5 HOH A 35 435 435 HOH HOH . E 5 HOH A 36 436 436 HOH HOH . E 5 HOH A 37 437 437 HOH HOH . E 5 HOH A 38 438 438 HOH HOH . E 5 HOH A 39 439 439 HOH HOH . E 5 HOH A 40 440 440 HOH HOH . E 5 HOH A 41 441 441 HOH HOH . E 5 HOH A 42 442 442 HOH HOH . E 5 HOH A 43 443 443 HOH HOH . E 5 HOH A 44 444 444 HOH HOH . E 5 HOH A 45 445 445 HOH HOH . E 5 HOH A 46 446 446 HOH HOH . E 5 HOH A 47 447 447 HOH HOH . E 5 HOH A 48 448 448 HOH HOH . E 5 HOH A 49 449 449 HOH HOH . E 5 HOH A 50 450 450 HOH HOH . E 5 HOH A 51 451 451 HOH HOH . E 5 HOH A 52 452 452 HOH HOH . E 5 HOH A 53 453 453 HOH HOH . E 5 HOH A 54 454 454 HOH HOH . E 5 HOH A 55 455 455 HOH HOH . E 5 HOH A 56 456 456 HOH HOH . E 5 HOH A 57 457 457 HOH HOH . E 5 HOH A 58 458 458 HOH HOH . E 5 HOH A 59 459 459 HOH HOH . E 5 HOH A 60 460 460 HOH HOH . E 5 HOH A 61 461 461 HOH HOH . E 5 HOH A 62 462 462 HOH HOH . E 5 HOH A 63 463 463 HOH HOH . E 5 HOH A 64 464 464 HOH HOH . E 5 HOH A 65 465 465 HOH HOH . E 5 HOH A 66 466 466 HOH HOH . E 5 HOH A 67 467 467 HOH HOH . E 5 HOH A 68 468 468 HOH HOH . E 5 HOH A 69 469 469 HOH HOH . E 5 HOH A 70 470 470 HOH HOH . E 5 HOH A 71 471 471 HOH HOH . E 5 HOH A 72 472 472 HOH HOH . E 5 HOH A 73 473 473 HOH HOH . E 5 HOH A 74 474 474 HOH HOH . E 5 HOH A 75 475 475 HOH HOH . E 5 HOH A 76 476 476 HOH HOH . E 5 HOH A 77 477 477 HOH HOH . E 5 HOH A 78 478 478 HOH HOH . E 5 HOH A 79 479 479 HOH HOH . E 5 HOH A 80 480 480 HOH HOH . E 5 HOH A 81 481 481 HOH HOH . E 5 HOH A 82 482 482 HOH HOH . E 5 HOH A 83 483 483 HOH HOH . E 5 HOH A 84 484 484 HOH HOH . E 5 HOH A 85 485 485 HOH HOH . E 5 HOH A 86 486 486 HOH HOH . E 5 HOH A 87 487 487 HOH HOH . E 5 HOH A 88 488 488 HOH HOH . E 5 HOH A 89 489 489 HOH HOH . E 5 HOH A 90 490 490 HOH HOH . E 5 HOH A 91 491 491 HOH HOH . E 5 HOH A 92 492 492 HOH HOH . E 5 HOH A 93 493 493 HOH HOH . E 5 HOH A 94 494 494 HOH HOH . E 5 HOH A 95 495 495 HOH HOH . E 5 HOH A 96 496 496 HOH HOH . E 5 HOH A 97 497 497 HOH HOH . E 5 HOH A 98 498 498 HOH HOH . E 5 HOH A 99 499 499 HOH HOH . E 5 HOH A 100 4100 4100 HOH HOH . E 5 HOH A 101 4101 4101 HOH HOH . E 5 HOH A 102 4102 4102 HOH HOH . E 5 HOH A 103 4103 4103 HOH HOH . E 5 HOH A 104 4104 4104 HOH HOH . E 5 HOH A 105 4105 4105 HOH HOH . E 5 HOH A 106 4106 4106 HOH HOH . E 5 HOH A 107 4107 4107 HOH HOH . E 5 HOH A 108 4108 4108 HOH HOH . E 5 HOH A 109 4109 4109 HOH HOH . E 5 HOH A 110 4110 4110 HOH HOH . E 5 HOH A 111 4111 4111 HOH HOH . E 5 HOH A 112 4112 4112 HOH HOH . E 5 HOH A 113 4113 4113 HOH HOH . E 5 HOH A 114 4114 4114 HOH HOH . E 5 HOH A 115 4115 4115 HOH HOH . E 5 HOH A 116 4116 4116 HOH HOH . E 5 HOH A 117 4117 4117 HOH HOH . E 5 HOH A 118 4118 4118 HOH HOH . E 5 HOH A 119 4119 4119 HOH HOH . E 5 HOH A 120 4120 4120 HOH HOH . E 5 HOH A 121 4121 4121 HOH HOH . E 5 HOH A 122 4122 4122 HOH HOH . E 5 HOH A 123 4123 4123 HOH HOH . E 5 HOH A 124 4124 4124 HOH HOH . E 5 HOH A 125 4125 4125 HOH HOH . E 5 HOH A 126 4126 4126 HOH HOH . E 5 HOH A 127 4127 4127 HOH HOH . E 5 HOH A 128 4128 4128 HOH HOH . E 5 HOH A 129 4129 4129 HOH HOH . E 5 HOH A 130 4130 4130 HOH HOH . E 5 HOH A 131 4131 4131 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HED . . . D 4 42.992 -27.025 -48.984 0.5 21.69 ? C1 HED 900 A 1 HETATM 2 O O1 HED . . . D 4 43.928 -26.053 -48.589 0.5 37.09 ? O1 HED 900 A 1 HETATM 3 C C2 HED . . . D 4 42.832 -26.941 -50.502 0.5 16.5 ? C2 HED 900 A 1 HETATM 4 S S3 HED . . . D 4 42.208 -28.463 -51.216 0.5 29.19 ? S3 HED 900 A 1 HETATM 5 S S4 HED . . . D 4 43.212 -28.83 -52.975 0.5 32.6 ? S4 HED 900 A 1 HETATM 6 C C5 HED . . . D 4 44.801 -29.636 -52.777 0.5 32.6 ? C5 HED 900 A 1 HETATM 7 C C6 HED . . . D 4 45.243 -29.584 -51.344 0.5 32.6 ? C6 HED 900 A 1 HETATM 8 O O6 HED . . . D 4 46.484 -30.252 -51.341 0.5 32.74 ? O6 HED 900 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #