data_1T8F # _model_server_result.job_id 7AW8LRKYDTeENlYJjowijg _model_server_result.datetime_utc '2024-11-24 03:28:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1t8f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":700}' # _entry.id 1T8F # _exptl.entry_id 1T8F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1T8F _cell.length_a 120.518 _cell.length_b 120.518 _cell.length_c 50.317 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T8F _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id D _struct_conn.ptnr1_label_atom_id S2 _struct_conn.ptnr1_label_comp_id BME _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id BME _struct_conn.ptnr1_auth_seq_id 600 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_atom_id S2 _struct_conn.ptnr2_label_comp_id BME _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id BME _struct_conn.ptnr2_auth_seq_id 700 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 1T8F _atom_sites.fract_transf_matrix[1][1] 0.008298 _atom_sites.fract_transf_matrix[1][2] 0.004791 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009581 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019874 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 800 800 CL CL . C 2 CL A 1 900 900 CL CL . D 3 BME A 1 600 600 BME BME . E 3 BME A 1 700 700 BME BME . F 4 HOH A 1 901 1 HOH HOH . F 4 HOH A 2 902 2 HOH HOH . F 4 HOH A 3 903 3 HOH HOH . F 4 HOH A 4 904 4 HOH HOH . F 4 HOH A 5 905 5 HOH HOH . F 4 HOH A 6 906 6 HOH HOH . F 4 HOH A 7 907 7 HOH HOH . F 4 HOH A 8 908 8 HOH HOH . F 4 HOH A 9 909 9 HOH HOH . F 4 HOH A 10 910 11 HOH HOH . F 4 HOH A 11 911 12 HOH HOH . F 4 HOH A 12 912 13 HOH HOH . F 4 HOH A 13 913 14 HOH HOH . F 4 HOH A 14 914 15 HOH HOH . F 4 HOH A 15 915 16 HOH HOH . F 4 HOH A 16 916 17 HOH HOH . F 4 HOH A 17 917 18 HOH HOH . F 4 HOH A 18 918 19 HOH HOH . F 4 HOH A 19 919 20 HOH HOH . F 4 HOH A 20 920 21 HOH HOH . F 4 HOH A 21 921 22 HOH HOH . F 4 HOH A 22 922 23 HOH HOH . F 4 HOH A 23 923 24 HOH HOH . F 4 HOH A 24 924 25 HOH HOH . F 4 HOH A 25 925 26 HOH HOH . F 4 HOH A 26 926 27 HOH HOH . F 4 HOH A 27 927 28 HOH HOH . F 4 HOH A 28 928 29 HOH HOH . F 4 HOH A 29 929 30 HOH HOH . F 4 HOH A 30 930 32 HOH HOH . F 4 HOH A 31 931 33 HOH HOH . F 4 HOH A 32 932 35 HOH HOH . F 4 HOH A 33 933 36 HOH HOH . F 4 HOH A 34 934 37 HOH HOH . F 4 HOH A 35 935 38 HOH HOH . F 4 HOH A 36 936 40 HOH HOH . F 4 HOH A 37 937 41 HOH HOH . F 4 HOH A 38 938 42 HOH HOH . F 4 HOH A 39 939 43 HOH HOH . F 4 HOH A 40 940 44 HOH HOH . F 4 HOH A 41 941 45 HOH HOH . F 4 HOH A 42 942 46 HOH HOH . F 4 HOH A 43 943 47 HOH HOH . F 4 HOH A 44 944 48 HOH HOH . F 4 HOH A 45 945 49 HOH HOH . F 4 HOH A 46 946 50 HOH HOH . F 4 HOH A 47 947 51 HOH HOH . F 4 HOH A 48 948 52 HOH HOH . F 4 HOH A 49 949 53 HOH HOH . F 4 HOH A 50 950 56 HOH HOH . F 4 HOH A 51 951 58 HOH HOH . F 4 HOH A 52 952 59 HOH HOH . F 4 HOH A 53 953 60 HOH HOH . F 4 HOH A 54 954 61 HOH HOH . F 4 HOH A 55 955 62 HOH HOH . F 4 HOH A 56 956 63 HOH HOH . F 4 HOH A 57 957 64 HOH HOH . F 4 HOH A 58 958 65 HOH HOH . F 4 HOH A 59 959 66 HOH HOH . F 4 HOH A 60 960 68 HOH HOH . F 4 HOH A 61 961 69 HOH HOH . F 4 HOH A 62 962 70 HOH HOH . F 4 HOH A 63 963 71 HOH HOH . F 4 HOH A 64 964 72 HOH HOH . F 4 HOH A 65 965 73 HOH HOH . F 4 HOH A 66 966 74 HOH HOH . F 4 HOH A 67 967 75 HOH HOH . F 4 HOH A 68 968 76 HOH HOH . F 4 HOH A 69 969 77 HOH HOH . F 4 HOH A 70 970 78 HOH HOH . F 4 HOH A 71 971 79 HOH HOH . F 4 HOH A 72 972 80 HOH HOH . F 4 HOH A 73 973 82 HOH HOH . F 4 HOH A 74 974 83 HOH HOH . F 4 HOH A 75 975 84 HOH HOH . F 4 HOH A 76 976 85 HOH HOH . F 4 HOH A 77 977 86 HOH HOH . F 4 HOH A 78 978 88 HOH HOH . F 4 HOH A 79 979 89 HOH HOH . F 4 HOH A 80 980 91 HOH HOH . F 4 HOH A 81 981 92 HOH HOH . F 4 HOH A 82 982 93 HOH HOH . F 4 HOH A 83 983 95 HOH HOH . F 4 HOH A 84 984 97 HOH HOH . F 4 HOH A 85 985 98 HOH HOH . F 4 HOH A 86 986 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . E 3 20.508 81.763 6.371 1 50.87 ? C1 BME 700 A 1 HETATM 2 C C2 BME . . . E 3 20.585 80.359 5.831 1 53.46 ? C2 BME 700 A 1 HETATM 3 O O1 BME . . . E 3 19.534 81.759 7.403 1 48.38 ? O1 BME 700 A 1 HETATM 4 S S2 BME . . . E 3 19.291 80.09 4.657 1 54.73 ? S2 BME 700 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #