data_1T93 # _model_server_result.job_id U6Q91s1c4nY85K_AWD1W8Q _model_server_result.datetime_utc '2024-10-18 16:22:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1t93 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":432}' # _entry.id 1T93 # _exptl.entry_id 1T93 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 206.152 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description FLAVIOLIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1T93 _cell.length_a 54.8 _cell.length_b 70.742 _cell.length_c 102.576 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T93 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 353 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 353 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id FE _struct_conn.ptnr2_label_comp_id HEM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HEM _struct_conn.ptnr2_auth_seq_id 430 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.413 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H6 O5' _chem_comp.formula_weight 206.152 _chem_comp.id FLV _chem_comp.mon_nstd_flag . _chem_comp.name FLAVIOLIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2,5,7-TRIHYDROXYNAPHTHOQUINONE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAB CAM FLV doub 83 n n CAM CAN FLV sing 84 n n CAM CAJ FLV sing 85 n n CAN CAH FLV sing 86 n y CAN CAO FLV doub 87 n y CAH CAI FLV doub 88 n y CAH HAH FLV sing 89 n n CAI OAC FLV sing 90 n n CAI CAF FLV sing 91 n y OAC HAC FLV sing 92 n n CAF CAK FLV doub 93 n y CAF HAF FLV sing 94 n n CAK OAE FLV sing 95 n n CAK CAO FLV sing 96 n y OAE HAE FLV sing 97 n n CAO CAL FLV sing 98 n n CAL OAA FLV doub 99 n n CAL CAG FLV sing 100 n n CAG CAJ FLV doub 101 n n CAG HAG FLV sing 102 n n CAJ OAD FLV sing 103 n n OAD HAD FLV sing 104 n n # _atom_sites.entry_id 1T93 _atom_sites.fract_transf_matrix[1][1] 0.018248 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014136 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009749 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 430 430 HEM HEM . C 3 FLV A 1 431 431 FLV FLA . D 3 FLV A 1 432 432 FLV FLA . E 4 HOH A 1 501 501 HOH TIP . E 4 HOH A 2 502 502 HOH TIP . E 4 HOH A 3 503 503 HOH TIP . E 4 HOH A 4 504 504 HOH TIP . E 4 HOH A 5 505 505 HOH TIP . E 4 HOH A 6 506 506 HOH TIP . E 4 HOH A 7 507 507 HOH TIP . E 4 HOH A 8 508 508 HOH TIP . E 4 HOH A 9 509 509 HOH TIP . E 4 HOH A 10 510 510 HOH TIP . E 4 HOH A 11 511 511 HOH TIP . E 4 HOH A 12 512 512 HOH TIP . E 4 HOH A 13 513 513 HOH TIP . E 4 HOH A 14 514 514 HOH TIP . E 4 HOH A 15 515 515 HOH TIP . E 4 HOH A 16 516 516 HOH TIP . E 4 HOH A 17 517 517 HOH TIP . E 4 HOH A 18 519 519 HOH TIP . E 4 HOH A 19 520 520 HOH TIP . E 4 HOH A 20 521 521 HOH TIP . E 4 HOH A 21 522 522 HOH TIP . E 4 HOH A 22 523 523 HOH TIP . E 4 HOH A 23 524 524 HOH TIP . E 4 HOH A 24 525 525 HOH TIP . E 4 HOH A 25 526 526 HOH TIP . E 4 HOH A 26 527 527 HOH TIP . E 4 HOH A 27 528 528 HOH TIP . E 4 HOH A 28 529 529 HOH TIP . E 4 HOH A 29 530 530 HOH TIP . E 4 HOH A 30 531 531 HOH TIP . E 4 HOH A 31 532 532 HOH TIP . E 4 HOH A 32 533 533 HOH TIP . E 4 HOH A 33 534 534 HOH TIP . E 4 HOH A 34 535 535 HOH TIP . E 4 HOH A 35 536 536 HOH TIP . E 4 HOH A 36 537 537 HOH TIP . E 4 HOH A 37 538 538 HOH TIP . E 4 HOH A 38 539 539 HOH TIP . E 4 HOH A 39 540 540 HOH TIP . E 4 HOH A 40 541 541 HOH TIP . E 4 HOH A 41 542 542 HOH TIP . E 4 HOH A 42 543 543 HOH TIP . E 4 HOH A 43 544 544 HOH TIP . E 4 HOH A 44 545 545 HOH TIP . E 4 HOH A 45 546 546 HOH TIP . E 4 HOH A 46 547 547 HOH TIP . E 4 HOH A 47 548 548 HOH TIP . E 4 HOH A 48 549 549 HOH TIP . E 4 HOH A 49 550 550 HOH TIP . E 4 HOH A 50 551 551 HOH TIP . E 4 HOH A 51 552 552 HOH TIP . E 4 HOH A 52 553 553 HOH TIP . E 4 HOH A 53 554 554 HOH TIP . E 4 HOH A 54 555 555 HOH TIP . E 4 HOH A 55 556 556 HOH TIP . E 4 HOH A 56 557 557 HOH TIP . E 4 HOH A 57 558 558 HOH TIP . E 4 HOH A 58 559 559 HOH TIP . E 4 HOH A 59 560 560 HOH TIP . E 4 HOH A 60 561 561 HOH TIP . E 4 HOH A 61 562 562 HOH TIP . E 4 HOH A 62 563 563 HOH TIP . E 4 HOH A 63 564 564 HOH TIP . E 4 HOH A 64 565 565 HOH TIP . E 4 HOH A 65 566 566 HOH TIP . E 4 HOH A 66 567 567 HOH TIP . E 4 HOH A 67 568 568 HOH TIP . E 4 HOH A 68 569 569 HOH TIP . E 4 HOH A 69 570 570 HOH TIP . E 4 HOH A 70 571 571 HOH TIP . E 4 HOH A 71 572 572 HOH TIP . E 4 HOH A 72 573 573 HOH TIP . E 4 HOH A 73 574 574 HOH TIP . E 4 HOH A 74 575 575 HOH TIP . E 4 HOH A 75 576 576 HOH TIP . E 4 HOH A 76 577 577 HOH TIP . E 4 HOH A 77 578 578 HOH TIP . E 4 HOH A 78 579 579 HOH TIP . E 4 HOH A 79 580 580 HOH TIP . E 4 HOH A 80 581 581 HOH TIP . E 4 HOH A 81 582 582 HOH TIP . E 4 HOH A 82 583 583 HOH TIP . E 4 HOH A 83 584 584 HOH TIP . E 4 HOH A 84 585 585 HOH TIP . E 4 HOH A 85 586 586 HOH TIP . E 4 HOH A 86 587 587 HOH TIP . E 4 HOH A 87 588 588 HOH TIP . E 4 HOH A 88 589 589 HOH TIP . E 4 HOH A 89 590 590 HOH TIP . E 4 HOH A 90 591 591 HOH TIP . E 4 HOH A 91 592 592 HOH TIP . E 4 HOH A 92 593 593 HOH TIP . E 4 HOH A 93 594 594 HOH TIP . E 4 HOH A 94 595 595 HOH TIP . E 4 HOH A 95 596 596 HOH TIP . E 4 HOH A 96 597 597 HOH TIP . E 4 HOH A 97 598 598 HOH TIP . E 4 HOH A 98 599 599 HOH TIP . E 4 HOH A 99 600 600 HOH TIP . E 4 HOH A 100 601 601 HOH TIP . E 4 HOH A 101 602 602 HOH TIP . E 4 HOH A 102 603 603 HOH TIP . E 4 HOH A 103 604 604 HOH TIP . E 4 HOH A 104 605 605 HOH TIP . E 4 HOH A 105 606 606 HOH TIP . E 4 HOH A 106 607 607 HOH TIP . E 4 HOH A 107 608 608 HOH TIP . E 4 HOH A 108 609 609 HOH TIP . E 4 HOH A 109 610 610 HOH TIP . E 4 HOH A 110 611 611 HOH TIP . E 4 HOH A 111 612 612 HOH TIP . E 4 HOH A 112 613 613 HOH TIP . E 4 HOH A 113 614 614 HOH TIP . E 4 HOH A 114 615 615 HOH TIP . E 4 HOH A 115 616 616 HOH TIP . E 4 HOH A 116 617 617 HOH TIP . E 4 HOH A 117 618 618 HOH TIP . E 4 HOH A 118 619 619 HOH TIP . E 4 HOH A 119 620 620 HOH TIP . E 4 HOH A 120 621 621 HOH TIP . E 4 HOH A 121 622 622 HOH TIP . E 4 HOH A 122 623 623 HOH TIP . E 4 HOH A 123 624 624 HOH TIP . E 4 HOH A 124 625 625 HOH TIP . E 4 HOH A 125 626 626 HOH TIP . E 4 HOH A 126 627 627 HOH TIP . E 4 HOH A 127 628 628 HOH TIP . E 4 HOH A 128 629 629 HOH TIP . E 4 HOH A 129 630 630 HOH TIP . E 4 HOH A 130 631 631 HOH TIP . E 4 HOH A 131 632 632 HOH TIP . E 4 HOH A 132 633 633 HOH TIP . E 4 HOH A 133 634 634 HOH TIP . E 4 HOH A 134 635 635 HOH TIP . E 4 HOH A 135 636 636 HOH TIP . E 4 HOH A 136 637 637 HOH TIP . E 4 HOH A 137 638 638 HOH TIP . E 4 HOH A 138 639 639 HOH TIP . E 4 HOH A 139 640 640 HOH TIP . E 4 HOH A 140 641 641 HOH TIP . E 4 HOH A 141 642 642 HOH TIP . E 4 HOH A 142 643 643 HOH TIP . E 4 HOH A 143 644 644 HOH TIP . E 4 HOH A 144 645 645 HOH TIP . E 4 HOH A 145 646 646 HOH TIP . E 4 HOH A 146 647 647 HOH TIP . E 4 HOH A 147 648 648 HOH TIP . E 4 HOH A 148 649 649 HOH TIP . E 4 HOH A 149 650 650 HOH TIP . E 4 HOH A 150 651 651 HOH TIP . E 4 HOH A 151 652 652 HOH TIP . E 4 HOH A 152 653 653 HOH TIP . E 4 HOH A 153 654 654 HOH TIP . E 4 HOH A 154 655 655 HOH TIP . E 4 HOH A 155 656 656 HOH TIP . E 4 HOH A 156 657 657 HOH TIP . E 4 HOH A 157 658 658 HOH TIP . E 4 HOH A 158 659 659 HOH TIP . E 4 HOH A 159 660 660 HOH TIP . E 4 HOH A 160 661 661 HOH TIP . E 4 HOH A 161 662 662 HOH TIP . E 4 HOH A 162 663 663 HOH TIP . E 4 HOH A 163 664 664 HOH TIP . E 4 HOH A 164 665 665 HOH TIP . E 4 HOH A 165 666 666 HOH TIP . E 4 HOH A 166 667 667 HOH TIP . E 4 HOH A 167 668 668 HOH TIP . E 4 HOH A 168 669 669 HOH TIP . E 4 HOH A 169 670 670 HOH TIP . E 4 HOH A 170 671 671 HOH TIP . E 4 HOH A 171 672 672 HOH TIP . E 4 HOH A 172 673 673 HOH TIP . E 4 HOH A 173 674 674 HOH TIP . E 4 HOH A 174 675 675 HOH TIP . E 4 HOH A 175 676 676 HOH TIP . E 4 HOH A 176 677 677 HOH TIP . E 4 HOH A 177 678 678 HOH TIP . E 4 HOH A 178 679 679 HOH TIP . E 4 HOH A 179 680 680 HOH TIP . E 4 HOH A 180 681 681 HOH TIP . E 4 HOH A 181 682 682 HOH TIP . E 4 HOH A 182 683 683 HOH TIP . E 4 HOH A 183 684 684 HOH TIP . E 4 HOH A 184 685 685 HOH TIP . E 4 HOH A 185 686 686 HOH TIP . E 4 HOH A 186 687 687 HOH TIP . E 4 HOH A 187 688 688 HOH TIP . E 4 HOH A 188 689 689 HOH TIP . E 4 HOH A 189 690 690 HOH TIP . E 4 HOH A 190 691 691 HOH TIP . E 4 HOH A 191 692 692 HOH TIP . E 4 HOH A 192 693 693 HOH TIP . E 4 HOH A 193 694 694 HOH TIP . E 4 HOH A 194 695 695 HOH TIP . E 4 HOH A 195 696 696 HOH TIP . E 4 HOH A 196 697 697 HOH TIP . E 4 HOH A 197 698 698 HOH TIP . E 4 HOH A 198 699 699 HOH TIP . E 4 HOH A 199 700 700 HOH TIP . E 4 HOH A 200 701 701 HOH TIP . E 4 HOH A 201 702 702 HOH TIP . E 4 HOH A 202 703 703 HOH TIP . E 4 HOH A 203 704 704 HOH TIP . E 4 HOH A 204 705 705 HOH TIP . E 4 HOH A 205 706 706 HOH TIP . E 4 HOH A 206 707 707 HOH TIP . E 4 HOH A 207 708 708 HOH TIP . E 4 HOH A 208 709 709 HOH TIP . E 4 HOH A 209 710 710 HOH TIP . E 4 HOH A 210 711 711 HOH TIP . E 4 HOH A 211 712 712 HOH TIP . E 4 HOH A 212 713 713 HOH TIP . E 4 HOH A 213 714 714 HOH TIP . E 4 HOH A 214 715 715 HOH TIP . E 4 HOH A 215 716 716 HOH TIP . E 4 HOH A 216 717 717 HOH TIP . E 4 HOH A 217 718 718 HOH TIP . E 4 HOH A 218 719 719 HOH TIP . E 4 HOH A 219 720 720 HOH TIP . E 4 HOH A 220 721 721 HOH TIP . E 4 HOH A 221 722 722 HOH TIP . E 4 HOH A 222 723 723 HOH TIP . E 4 HOH A 223 724 724 HOH TIP . E 4 HOH A 224 725 725 HOH TIP . E 4 HOH A 225 726 726 HOH TIP . E 4 HOH A 226 727 727 HOH TIP . E 4 HOH A 227 728 728 HOH TIP . E 4 HOH A 228 729 729 HOH TIP . E 4 HOH A 229 730 730 HOH TIP . E 4 HOH A 230 731 731 HOH TIP . E 4 HOH A 231 732 732 HOH TIP . E 4 HOH A 232 733 733 HOH TIP . E 4 HOH A 233 734 734 HOH TIP . E 4 HOH A 234 735 735 HOH TIP . E 4 HOH A 235 736 736 HOH TIP . E 4 HOH A 236 737 737 HOH TIP . E 4 HOH A 237 738 738 HOH TIP . E 4 HOH A 238 739 739 HOH TIP . E 4 HOH A 239 740 740 HOH TIP . E 4 HOH A 240 741 741 HOH TIP . E 4 HOH A 241 742 742 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAB FLV . . . D 3 51.841 75.116 59.084 1 19.15 ? OAB FLV 432 A 1 HETATM 2 C CAM FLV . . . D 3 50.733 74.602 59.245 1 16.81 ? CAM FLV 432 A 1 HETATM 3 C CAN FLV . . . D 3 50.282 73.61 58.381 1 14.57 ? CAN FLV 432 A 1 HETATM 4 C CAH FLV . . . D 3 51.039 73.264 57.262 1 15.58 ? CAH FLV 432 A 1 HETATM 5 C CAI FLV . . . D 3 50.57 72.304 56.369 1 14.74 ? CAI FLV 432 A 1 HETATM 6 O OAC FLV . . . D 3 51.305 71.985 55.269 1 14.19 ? OAC FLV 432 A 1 HETATM 7 C CAF FLV . . . D 3 49.348 71.684 56.596 1 15.67 ? CAF FLV 432 A 1 HETATM 8 C CAK FLV . . . D 3 48.591 72.021 57.717 1 16.08 ? CAK FLV 432 A 1 HETATM 9 O OAE FLV . . . D 3 47.416 71.379 57.943 1 15.18 ? OAE FLV 432 A 1 HETATM 10 C CAO FLV . . . D 3 49.055 72.988 58.607 1 16.74 ? CAO FLV 432 A 1 HETATM 11 C CAL FLV . . . D 3 48.281 73.375 59.7 1 15.49 ? CAL FLV 432 A 1 HETATM 12 O OAA FLV . . . D 3 47.196 72.839 59.918 1 17.51 ? OAA FLV 432 A 1 HETATM 13 C CAG FLV . . . D 3 48.729 74.375 60.559 1 17.21 ? CAG FLV 432 A 1 HETATM 14 C CAJ FLV . . . D 3 49.957 74.99 60.334 1 19.35 ? CAJ FLV 432 A 1 HETATM 15 O OAD FLV . . . D 3 50.388 75.977 61.165 1 19.2 ? OAD FLV 432 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #