data_1T9G # _model_server_result.job_id 40aHLqDbxpT0ov67KLS9sw _model_server_result.datetime_utc '2024-11-10 01:23:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1t9g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":399}' # _entry.id 1T9G # _exptl.entry_id 1T9G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1T9G _cell.length_a 94.333 _cell.length_b 101.322 _cell.length_c 244.785 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T9G _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 122 n n PA O2A FAD sing 123 n n PA O5B FAD sing 124 n n PA O3P FAD sing 125 n n O2A HOA2 FAD sing 126 n n O5B C5B FAD sing 127 n n C5B C4B FAD sing 128 n n C5B H51A FAD sing 129 n n C5B H52A FAD sing 130 n n C4B O4B FAD sing 131 n n C4B C3B FAD sing 132 n n C4B H4B FAD sing 133 n n O4B C1B FAD sing 134 n n C3B O3B FAD sing 135 n n C3B C2B FAD sing 136 n n C3B H3B FAD sing 137 n n O3B HO3A FAD sing 138 n n C2B O2B FAD sing 139 n n C2B C1B FAD sing 140 n n C2B H2B FAD sing 141 n n O2B HO2A FAD sing 142 n n C1B N9A FAD sing 143 n n C1B H1B FAD sing 144 n n N9A C8A FAD sing 145 n y N9A C4A FAD sing 146 n y C8A N7A FAD doub 147 n y C8A H8A FAD sing 148 n n N7A C5A FAD sing 149 n y C5A C6A FAD sing 150 n y C5A C4A FAD doub 151 n y C6A N6A FAD sing 152 n n C6A N1A FAD doub 153 n y N6A H61A FAD sing 154 n n N6A H62A FAD sing 155 n n N1A C2A FAD sing 156 n y C2A N3A FAD doub 157 n y C2A H2A FAD sing 158 n n N3A C4A FAD sing 159 n y N1 C2 FAD sing 160 n n N1 C10 FAD doub 161 n n C2 O2 FAD doub 162 n n C2 N3 FAD sing 163 n n N3 C4 FAD sing 164 n n N3 HN3 FAD sing 165 n n C4 O4 FAD doub 166 n n C4 C4X FAD sing 167 n n C4X N5 FAD doub 168 n n C4X C10 FAD sing 169 n n N5 C5X FAD sing 170 n n C5X C6 FAD doub 171 n y C5X C9A FAD sing 172 n y C6 C7 FAD sing 173 n y C6 H6 FAD sing 174 n n C7 C7M FAD sing 175 n n C7 C8 FAD doub 176 n y C7M HM71 FAD sing 177 n n C7M HM72 FAD sing 178 n n C7M HM73 FAD sing 179 n n C8 C8M FAD sing 180 n n C8 C9 FAD sing 181 n y C8M HM81 FAD sing 182 n n C8M HM82 FAD sing 183 n n C8M HM83 FAD sing 184 n n C9 C9A FAD doub 185 n y C9 H9 FAD sing 186 n n C9A N10 FAD sing 187 n n N10 C10 FAD sing 188 n n N10 C1' FAD sing 189 n n C1' C2' FAD sing 190 n n C1' "H1'1" FAD sing 191 n n C1' "H1'2" FAD sing 192 n n C2' O2' FAD sing 193 n n C2' C3' FAD sing 194 n n C2' H2' FAD sing 195 n n O2' HO2' FAD sing 196 n n C3' O3' FAD sing 197 n n C3' C4' FAD sing 198 n n C3' H3' FAD sing 199 n n O3' HO3' FAD sing 200 n n C4' O4' FAD sing 201 n n C4' C5' FAD sing 202 n n C4' H4' FAD sing 203 n n O4' HO4' FAD sing 204 n n C5' O5' FAD sing 205 n n C5' "H5'1" FAD sing 206 n n C5' "H5'2" FAD sing 207 n n O5' P FAD sing 208 n n P O1P FAD doub 209 n n P O2P FAD sing 210 n n P O3P FAD sing 211 n n O2P HOP2 FAD sing 212 n n # _atom_sites.entry_id 1T9G _atom_sites.fract_transf_matrix[1][1] 0.010601 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00987 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004085 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 FAD A 1 399 399 FAD FAD . H 4 FAD B 1 399 399 FAD FAD . I 4 FAD C 1 399 399 FAD FAD . J 4 FAD D 1 399 399 FAD FAD . K 5 AMP S 1 600 600 AMP AMP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . G 4 5.089 24.886 36.558 1 24.52 ? PA FAD 399 A 1 HETATM 2 O O1A FAD . . . G 4 4.247 25.134 35.345 1 30.9 ? O1A FAD 399 A 1 HETATM 3 O O2A FAD . . . G 4 5.403 23.432 36.652 1 28.89 ? O2A FAD 399 A 1 HETATM 4 O O5B FAD . . . G 4 6.35 25.817 36.428 1 27.18 ? O5B FAD 399 A 1 HETATM 5 C C5B FAD . . . G 4 7.512 25.435 37.171 1 29.77 ? C5B FAD 399 A 1 HETATM 6 C C4B FAD . . . G 4 8.572 26.534 37.242 1 26.76 ? C4B FAD 399 A 1 HETATM 7 O O4B FAD . . . G 4 9.011 26.696 35.904 1 27.78 ? O4B FAD 399 A 1 HETATM 8 C C3B FAD . . . G 4 7.998 27.882 37.653 1 25.54 ? C3B FAD 399 A 1 HETATM 9 O O3B FAD . . . G 4 9.01 28.499 38.39 1 22.99 ? O3B FAD 399 A 1 HETATM 10 C C2B FAD . . . G 4 7.686 28.586 36.329 1 24.6 ? C2B FAD 399 A 1 HETATM 11 O O2B FAD . . . G 4 7.706 29.997 36.374 1 22.32 ? O2B FAD 399 A 1 HETATM 12 C C1B FAD . . . G 4 8.748 27.992 35.403 1 26.26 ? C1B FAD 399 A 1 HETATM 13 N N9A FAD . . . G 4 8.39 27.82 33.986 1 27.05 ? N9A FAD 399 A 1 HETATM 14 C C8A FAD . . . G 4 7.351 27.067 33.495 1 28.33 ? C8A FAD 399 A 1 HETATM 15 N N7A FAD . . . G 4 7.341 27.167 32.145 1 28.05 ? N7A FAD 399 A 1 HETATM 16 C C5A FAD . . . G 4 8.369 27.961 31.761 1 27.91 ? C5A FAD 399 A 1 HETATM 17 C C6A FAD . . . G 4 8.817 28.355 30.517 1 28.04 ? C6A FAD 399 A 1 HETATM 18 N N6A FAD . . . G 4 7.991 28.299 29.474 1 32.41 ? N6A FAD 399 A 1 HETATM 19 N N1A FAD . . . G 4 9.917 29.153 30.425 1 27.9 ? N1A FAD 399 A 1 HETATM 20 C C2A FAD . . . G 4 10.57 29.58 31.557 1 28.17 ? C2A FAD 399 A 1 HETATM 21 N N3A FAD . . . G 4 10.122 29.179 32.788 1 27.72 ? N3A FAD 399 A 1 HETATM 22 C C4A FAD . . . G 4 9.039 28.375 32.899 1 27.95 ? C4A FAD 399 A 1 HETATM 23 N N1 FAD . . . G 4 -5.323 27.032 39.567 1 32.54 ? N1 FAD 399 A 1 HETATM 24 C C2 FAD . . . G 4 -6.709 27.157 39.141 1 33.09 ? C2 FAD 399 A 1 HETATM 25 O O2 FAD . . . G 4 -7.155 26.813 38.003 1 32.7 ? O2 FAD 399 A 1 HETATM 26 N N3 FAD . . . G 4 -7.62 27.63 40.024 1 33.24 ? N3 FAD 399 A 1 HETATM 27 C C4 FAD . . . G 4 -7.27 28.032 41.292 1 34.23 ? C4 FAD 399 A 1 HETATM 28 O O4 FAD . . . G 4 -7.913 28.539 42.286 1 35.11 ? O4 FAD 399 A 1 HETATM 29 C C4X FAD . . . G 4 -5.849 27.913 41.754 1 34.14 ? C4X FAD 399 A 1 HETATM 30 N N5 FAD . . . G 4 -5.337 28.329 42.996 1 33.8 ? N5 FAD 399 A 1 HETATM 31 C C5X FAD . . . G 4 -3.984 28.26 43.332 1 32.84 ? C5X FAD 399 A 1 HETATM 32 C C6 FAD . . . G 4 -3.68 28.659 44.613 1 33.52 ? C6 FAD 399 A 1 HETATM 33 C C7 FAD . . . G 4 -2.428 28.634 45.081 1 34.83 ? C7 FAD 399 A 1 HETATM 34 C C7M FAD . . . G 4 -2.113 28.581 46.566 1 32.79 ? C7M FAD 399 A 1 HETATM 35 C C8 FAD . . . G 4 -1.454 28.178 44.167 1 34.81 ? C8 FAD 399 A 1 HETATM 36 C C8M FAD . . . G 4 -0.366 27.536 44.698 1 36.22 ? C8M FAD 399 A 1 HETATM 37 C C9 FAD . . . G 4 -1.768 27.766 42.845 1 33.66 ? C9 FAD 399 A 1 HETATM 38 C C9A FAD . . . G 4 -3.069 27.789 42.402 1 32.84 ? C9A FAD 399 A 1 HETATM 39 N N10 FAD . . . G 4 -3.523 27.377 41.086 1 33.53 ? N10 FAD 399 A 1 HETATM 40 C C10 FAD . . . G 4 -4.897 27.423 40.826 1 34.22 ? C10 FAD 399 A 1 HETATM 41 C C1' FAD . . . G 4 -2.436 27.182 39.691 1 29.06 ? C1' FAD 399 A 1 HETATM 42 C C2' FAD . . . G 4 -1.162 28.188 39.7 1 27.39 ? C2' FAD 399 A 1 HETATM 43 O O2' FAD . . . G 4 -1.263 29.252 38.74 1 25.65 ? O2' FAD 399 A 1 HETATM 44 C C3' FAD . . . G 4 0.024 27.416 39.14 1 25.46 ? C3' FAD 399 A 1 HETATM 45 O O3' FAD . . . G 4 0.54 26.583 40.149 1 19.81 ? O3' FAD 399 A 1 HETATM 46 C C4' FAD . . . G 4 1.069 28.324 38.481 1 24.82 ? C4' FAD 399 A 1 HETATM 47 O O4' FAD . . . G 4 0.613 28.771 37.217 1 25.59 ? O4' FAD 399 A 1 HETATM 48 C C5' FAD . . . G 4 2.322 27.551 38.178 1 24.19 ? C5' FAD 399 A 1 HETATM 49 O O5' FAD . . . G 4 1.985 26.331 37.542 1 23.13 ? O5' FAD 399 A 1 HETATM 50 P P FAD . . . G 4 2.774 25.07 38.152 1 27.52 ? P FAD 399 A 1 HETATM 51 O O1P FAD . . . G 4 2.612 25.031 39.675 1 22.74 ? O1P FAD 399 A 1 HETATM 52 O O2P FAD . . . G 4 2.354 23.794 37.459 1 28.06 ? O2P FAD 399 A 1 HETATM 53 O O3P FAD . . . G 4 4.362 25.347 37.908 1 27.25 ? O3P FAD 399 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 53 #