data_1T9R # _model_server_result.job_id 2j8e1pkjC5660Ua9tpXZOw _model_server_result.datetime_utc '2024-11-14 09:26:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1t9r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":101}' # _entry.id 1T9R # _exptl.entry_id 1T9R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1T9R _cell.length_a 96.411 _cell.length_b 96.411 _cell.length_c 79.026 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T9R _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B ZN ZN . A ZN 1 1_555 C O3 PO4 . A PO4 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.725 ? metalc ? metalc2 B ZN ZN . A ZN 1 1_555 A NE2 HIS 108 A HIS 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc3 B ZN ZN . A ZN 1 1_555 A NE2 HIS 144 A HIS 653 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc4 B ZN ZN . A ZN 1 1_555 A OD1 ASP 255 A ASP 764 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 1T9R _atom_sites.fract_transf_matrix[1][1] 0.010372 _atom_sites.fract_transf_matrix[1][2] 0.005988 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011977 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012654 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1 1 ZN ZN . C 3 PO4 A 1 102 102 PO4 PO4 . D 4 CIT A 1 101 101 CIT CIT . E 5 HOH A 1 876 1 HOH HOH . E 5 HOH A 2 877 2 HOH HOH . E 5 HOH A 3 878 3 HOH HOH . E 5 HOH A 4 879 4 HOH HOH . E 5 HOH A 5 880 5 HOH HOH . E 5 HOH A 6 881 6 HOH HOH . E 5 HOH A 7 882 7 HOH HOH . E 5 HOH A 8 883 8 HOH HOH . E 5 HOH A 9 884 9 HOH HOH . E 5 HOH A 10 885 10 HOH HOH . E 5 HOH A 11 886 11 HOH HOH . E 5 HOH A 12 887 12 HOH HOH . E 5 HOH A 13 888 13 HOH HOH . E 5 HOH A 14 889 14 HOH HOH . E 5 HOH A 15 890 15 HOH HOH . E 5 HOH A 16 891 16 HOH HOH . E 5 HOH A 17 892 17 HOH HOH . E 5 HOH A 18 893 18 HOH HOH . E 5 HOH A 19 894 19 HOH HOH . E 5 HOH A 20 895 20 HOH HOH . E 5 HOH A 21 896 21 HOH HOH . E 5 HOH A 22 897 22 HOH HOH . E 5 HOH A 23 898 23 HOH HOH . E 5 HOH A 24 899 24 HOH HOH . E 5 HOH A 25 900 25 HOH HOH . E 5 HOH A 26 901 26 HOH HOH . E 5 HOH A 27 902 27 HOH HOH . E 5 HOH A 28 903 28 HOH HOH . E 5 HOH A 29 904 29 HOH HOH . E 5 HOH A 30 905 30 HOH HOH . E 5 HOH A 31 906 31 HOH HOH . E 5 HOH A 32 907 32 HOH HOH . E 5 HOH A 33 908 33 HOH HOH . E 5 HOH A 34 909 34 HOH HOH . E 5 HOH A 35 910 35 HOH HOH . E 5 HOH A 36 911 36 HOH HOH . E 5 HOH A 37 912 37 HOH HOH . E 5 HOH A 38 913 38 HOH HOH . E 5 HOH A 39 914 39 HOH HOH . E 5 HOH A 40 915 40 HOH HOH . E 5 HOH A 41 916 41 HOH HOH . E 5 HOH A 42 917 42 HOH HOH . E 5 HOH A 43 918 43 HOH HOH . E 5 HOH A 44 919 44 HOH HOH . E 5 HOH A 45 920 45 HOH HOH . E 5 HOH A 46 921 46 HOH HOH . E 5 HOH A 47 922 47 HOH HOH . E 5 HOH A 48 923 48 HOH HOH . E 5 HOH A 49 924 49 HOH HOH . E 5 HOH A 50 925 50 HOH HOH . E 5 HOH A 51 926 51 HOH HOH . E 5 HOH A 52 927 52 HOH HOH . E 5 HOH A 53 928 53 HOH HOH . E 5 HOH A 54 929 54 HOH HOH . E 5 HOH A 55 930 55 HOH HOH . E 5 HOH A 56 931 56 HOH HOH . E 5 HOH A 57 932 57 HOH HOH . E 5 HOH A 58 933 58 HOH HOH . E 5 HOH A 59 934 59 HOH HOH . E 5 HOH A 60 935 60 HOH HOH . E 5 HOH A 61 936 61 HOH HOH . E 5 HOH A 62 937 62 HOH HOH . E 5 HOH A 63 938 63 HOH HOH . E 5 HOH A 64 939 64 HOH HOH . E 5 HOH A 65 940 65 HOH HOH . E 5 HOH A 66 941 66 HOH HOH . E 5 HOH A 67 942 67 HOH HOH . E 5 HOH A 68 943 68 HOH HOH . E 5 HOH A 69 944 69 HOH HOH . E 5 HOH A 70 945 70 HOH HOH . E 5 HOH A 71 946 71 HOH HOH . E 5 HOH A 72 947 72 HOH HOH . E 5 HOH A 73 948 73 HOH HOH . E 5 HOH A 74 949 74 HOH HOH . E 5 HOH A 75 950 75 HOH HOH . E 5 HOH A 76 951 76 HOH HOH . E 5 HOH A 77 952 77 HOH HOH . E 5 HOH A 78 953 78 HOH HOH . E 5 HOH A 79 954 79 HOH HOH . E 5 HOH A 80 955 80 HOH HOH . E 5 HOH A 81 956 81 HOH HOH . E 5 HOH A 82 957 82 HOH HOH . E 5 HOH A 83 958 83 HOH HOH . E 5 HOH A 84 959 84 HOH HOH . E 5 HOH A 85 960 85 HOH HOH . E 5 HOH A 86 961 86 HOH HOH . E 5 HOH A 87 962 87 HOH HOH . E 5 HOH A 88 963 88 HOH HOH . E 5 HOH A 89 964 89 HOH HOH . E 5 HOH A 90 965 90 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . D 4 49.257 -2.648 -6.125 1 67.87 ? C1 CIT 101 A 1 HETATM 2 O O1 CIT . . . D 4 49.884 -3.342 -6.931 1 72.78 ? O1 CIT 101 A 1 HETATM 3 O O2 CIT . . . D 4 48.348 -3.265 -5.516 1 73.66 ? O2 CIT 101 A 1 HETATM 4 C C2 CIT . . . D 4 49.58 -1.173 -5.933 1 64.66 ? C2 CIT 101 A 1 HETATM 5 C C3 CIT . . . D 4 48.35 -0.144 -6.089 0.5 66.26 ? C3 CIT 101 A 1 HETATM 6 O O7 CIT . . . D 4 47.087 -0.921 -6.143 1 65.13 ? O7 CIT 101 A 1 HETATM 7 C C4 CIT . . . D 4 48.337 0.984 -7.295 1 69.93 ? C4 CIT 101 A 1 HETATM 8 C C5 CIT . . . D 4 47.041 1.314 -8.151 1 72.97 ? C5 CIT 101 A 1 HETATM 9 O O3 CIT . . . D 4 46.969 2.336 -8.886 1 73.89 ? O3 CIT 101 A 1 HETATM 10 O O4 CIT . . . D 4 45.978 0.636 -8.202 1 76.25 ? O4 CIT 101 A 1 HETATM 11 C C6 CIT . . . D 4 48.253 0.363 -4.609 0.5 65.06 ? C6 CIT 101 A 1 HETATM 12 O O5 CIT . . . D 4 48.959 1.31 -4.063 1 61.6 ? O5 CIT 101 A 1 HETATM 13 O O6 CIT . . . D 4 47.394 -0.266 -3.878 1 66.82 ? O6 CIT 101 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #