data_1TAU # _model_server_result.job_id 12dFzi0o2adgjtW2mKSRrw _model_server_result.datetime_utc '2024-11-17 03:58:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tau # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1001}' # _entry.id 1TAU # _exptl.entry_id 1TAU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 292.369 _entity.id 4 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-O-octyl-beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1TAU _cell.length_a 107.6 _cell.length_b 107.6 _cell.length_c 170.01 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TAU _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C OD2 ASP 18 A ASP 18 1_555 E ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc2 C OD1 ASP 119 A ASP 119 1_555 E ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? metalc ? metalc3 C OD2 ASP 119 A ASP 119 1_555 E ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc4 C OD1 ASP 142 A ASP 142 1_555 E ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? hydrog WATSON-CRICK hydrog1 A N1 DG 1 T DG 901 1_555 B N3 DC 8 P DC 951 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 DG 1 T DG 901 1_555 B O2 DC 8 P DC 951 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 DG 1 T DG 901 1_555 B N4 DC 8 P DC 951 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 DC 2 T DC 902 1_555 B N1 DG 7 P DG 952 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N4 DC 2 T DC 902 1_555 B O6 DG 7 P DG 952 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O2 DC 2 T DC 902 1_555 B N2 DG 7 P DG 952 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N1 DG 3 T DG 903 1_555 B N3 DC 6 P DC 953 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N2 DG 3 T DG 903 1_555 B O2 DC 6 P DC 953 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O6 DG 3 T DG 903 1_555 B N4 DC 6 P DC 953 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 DA 4 T DA 904 1_555 B N3 DT 5 P DT 954 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N6 DA 4 T DA 904 1_555 B O4 DT 5 P DT 954 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N3 DT 5 T DT 905 1_555 B N1 DA 4 P DA 955 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A O4 DT 5 T DT 905 1_555 B N6 DA 4 P DA 955 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N3 DC 6 T DC 906 1_555 B N1 DG 3 P DG 956 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N4 DC 6 T DC 906 1_555 B O6 DG 3 P DG 956 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A O2 DC 6 T DC 906 1_555 B N2 DG 3 P DG 956 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DC-DG PAIR' hydrog17 A N4 DC 7 T DC 907 1_555 B O6 DG 2 P DG 957 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DC-DG PAIR' hydrog18 A O2 DC 7 T DC 907 1_555 B N2 DG 3 P DG 956 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DG MISPAIR' hydrog19 A N2 DG 8 T DG 908 1_555 B O6 DG 2 P DG 957 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C14 H28 O6' _chem_comp.formula_weight 292.369 _chem_comp.id BGL _chem_comp.mon_nstd_flag n _chem_comp.name 2-O-octyl-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms 2-O-octyl-beta-D-glucose;2-O-octyl-D-glucose;2-O-octyl-glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BGL sing 70 n n C1 C2 BGL sing 71 n n C1 O5 BGL sing 72 n n C1 H1 BGL sing 73 n n O1 HO1 BGL sing 74 n n C2 O2 BGL sing 75 n n C2 C3 BGL sing 76 n n C2 H2 BGL sing 77 n n O2 C1' BGL sing 78 n n C3 O3 BGL sing 79 n n C3 C4 BGL sing 80 n n C3 H3 BGL sing 81 n n O3 HO3 BGL sing 82 n n C4 O4 BGL sing 83 n n C4 C5 BGL sing 84 n n C4 H4 BGL sing 85 n n O4 HO4 BGL sing 86 n n C5 O5 BGL sing 87 n n C5 C6 BGL sing 88 n n C5 H5 BGL sing 89 n n C6 O6 BGL sing 90 n n C6 H61 BGL sing 91 n n C6 H62 BGL sing 92 n n O6 HO6 BGL sing 93 n n C1' C2' BGL sing 94 n n C1' "H1'1" BGL sing 95 n n C1' "H1'2" BGL sing 96 n n C2' C3' BGL sing 97 n n C2' "H2'1" BGL sing 98 n n C2' "H2'2" BGL sing 99 n n C3' C4' BGL sing 100 n n C3' "H3'1" BGL sing 101 n n C3' "H3'2" BGL sing 102 n n C4' C5' BGL sing 103 n n C4' "H4'1" BGL sing 104 n n C4' "H4'2" BGL sing 105 n n C5' C6' BGL sing 106 n n C5' "H5'1" BGL sing 107 n n C5' "H5'2" BGL sing 108 n n C6' C7' BGL sing 109 n n C6' "H6'1" BGL sing 110 n n C6' "H6'2" BGL sing 111 n n C7' C8' BGL sing 112 n n C7' "H7'1" BGL sing 113 n n C7' "H7'2" BGL sing 114 n n C8' "H8'1" BGL sing 115 n n C8' "H8'2" BGL sing 116 n n C8' "H8'3" BGL sing 117 n n # _pdbx_chem_comp_identifier.comp_id BGL _pdbx_chem_comp_identifier.identifier b-D-Glcp2octyl _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 1TAU _atom_sites.fract_transf_matrix[1][1] 0.009294 _atom_sites.fract_transf_matrix[1][2] 0.005366 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010731 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005882 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 BGL A 1 1001 1001 BGL BGL . E 5 ZN A 1 900 900 ZN ZN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BGL . . . D 4 -23.141 58.067 56.795 1 25.98 ? C1 BGL 1001 A 1 HETATM 2 O O1 BGL . . . D 4 -22.491 57.328 55.856 1 27.86 ? O1 BGL 1001 A 1 HETATM 3 C C2 BGL . . . D 4 -23.379 59.56 56.592 1 22.42 ? C2 BGL 1001 A 1 HETATM 4 O O2 BGL . . . D 4 -22.213 60.285 56.19 1 15.29 ? O2 BGL 1001 A 1 HETATM 5 C C3 BGL . . . D 4 -24.089 59.848 57.96 1 25.7 ? C3 BGL 1001 A 1 HETATM 6 O O3 BGL . . . D 4 -24.667 61.068 57.891 1 32.29 ? O3 BGL 1001 A 1 HETATM 7 C C4 BGL . . . D 4 -25.323 58.951 58.363 1 32.17 ? C4 BGL 1001 A 1 HETATM 8 O O4 BGL . . . D 4 -25.643 59.076 59.686 1 33.56 ? O4 BGL 1001 A 1 HETATM 9 C C5 BGL . . . D 4 -24.959 57.509 57.99 1 35.64 ? C5 BGL 1001 A 1 HETATM 10 O O5 BGL . . . D 4 -24.456 57.525 56.652 1 30.57 ? O5 BGL 1001 A 1 HETATM 11 C C6 BGL . . . D 4 -25.946 56.357 58.092 1 41.09 ? C6 BGL 1001 A 1 HETATM 12 O O6 BGL . . . D 4 -25.174 55.256 57.635 1 46.78 ? O6 BGL 1001 A 1 HETATM 13 C C1' BGL . . . D 4 -21.794 61.416 56.956 1 15.83 ? C1' BGL 1001 A 1 HETATM 14 C C2' BGL . . . D 4 -20.326 61.684 56.576 1 13.51 ? C2' BGL 1001 A 1 HETATM 15 C C3' BGL . . . D 4 -19.671 63.077 56.703 1 12.32 ? C3' BGL 1001 A 1 HETATM 16 C C4' BGL . . . D 4 -18.178 63.044 56.331 1 14.19 ? C4' BGL 1001 A 1 HETATM 17 C C5' BGL . . . D 4 -17.972 62.603 54.874 1 13.55 ? C5' BGL 1001 A 1 HETATM 18 C C6' BGL . . . D 4 -16.612 61.974 54.617 1 10.26 ? C6' BGL 1001 A 1 HETATM 19 C C7' BGL . . . D 4 -15.505 62.988 54.731 1 13.27 ? C7' BGL 1001 A 1 HETATM 20 C C8' BGL . . . D 4 -14.234 62.211 54.501 1 14.21 ? C8' BGL 1001 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 20 #