data_1TBW # _model_server_result.job_id VteUOS3YT8zC7BdTPdPHZQ _model_server_result.datetime_utc '2024-11-29 01:47:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tbw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":701}' # _entry.id 1TBW # _exptl.entry_id 1TBW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1TBW _cell.length_a 160.202 _cell.length_b 160.202 _cell.length_c 109.564 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TBW _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 H N N ? 4 J N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 43 A ASN 107 1_555 C MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc2 D O2P AMP . A AMP 301 1_555 C MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc3 C MG MG . A MG 501 1_555 L O HOH . A HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc4 C MG MG . A MG 501 1_555 L O HOH . A HOH 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc5 C MG MG . A MG 501 1_555 L O HOH . A HOH 522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc6 C MG MG . A MG 501 1_555 L O HOH . A HOH 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc7 B OD1 ASN 43 B ASN 107 1_555 G MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc8 I O2P AMP . B AMP 601 1_555 G MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc9 G MG MG . B MG 802 1_555 M O HOH . B HOH 819 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc10 G MG MG . B MG 802 1_555 M O HOH . B HOH 847 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc11 G MG MG . B MG 802 1_555 M O HOH . B HOH 882 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 276 n n O1 HO1 PG4 sing 277 n n C1 C2 PG4 sing 278 n n C1 H11 PG4 sing 279 n n C1 H12 PG4 sing 280 n n C2 O2 PG4 sing 281 n n C2 H21 PG4 sing 282 n n C2 H22 PG4 sing 283 n n O2 C3 PG4 sing 284 n n C3 C4 PG4 sing 285 n n C3 H31 PG4 sing 286 n n C3 H32 PG4 sing 287 n n C4 O3 PG4 sing 288 n n C4 H41 PG4 sing 289 n n C4 H42 PG4 sing 290 n n O3 C5 PG4 sing 291 n n C5 C6 PG4 sing 292 n n C5 H51 PG4 sing 293 n n C5 H52 PG4 sing 294 n n C6 O4 PG4 sing 295 n n C6 H61 PG4 sing 296 n n C6 H62 PG4 sing 297 n n O4 C7 PG4 sing 298 n n C7 C8 PG4 sing 299 n n C7 H71 PG4 sing 300 n n C7 H72 PG4 sing 301 n n C8 O5 PG4 sing 302 n n C8 H81 PG4 sing 303 n n C8 H82 PG4 sing 304 n n O5 HO5 PG4 sing 305 n n # _atom_sites.entry_id 1TBW _atom_sites.fract_transf_matrix[1][1] 0.006242 _atom_sites.fract_transf_matrix[1][2] 0.003604 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007208 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009127 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 501 1 MG MG . D 3 AMP A 1 301 1 AMP AMP . E 4 PG4 A 1 401 1 PG4 PG4 . F 4 PG4 A 1 403 3 PG4 PG4 . G 2 MG B 1 802 2 MG MG . H 4 PG4 B 1 402 2 PG4 PG4 . I 3 AMP B 1 601 1 AMP AMP . J 4 PG4 B 1 701 1 PG4 PG4 . K 4 PG4 B 1 702 2 PG4 PG4 . L 5 HOH A 1 502 1 HOH HOH . L 5 HOH A 2 503 2 HOH HOH . L 5 HOH A 3 504 3 HOH HOH . L 5 HOH A 4 505 4 HOH HOH . L 5 HOH A 5 506 5 HOH HOH . L 5 HOH A 6 507 6 HOH HOH . L 5 HOH A 7 508 8 HOH HOH . L 5 HOH A 8 509 10 HOH HOH . L 5 HOH A 9 510 13 HOH HOH . L 5 HOH A 10 511 15 HOH HOH . L 5 HOH A 11 512 16 HOH HOH . L 5 HOH A 12 513 17 HOH HOH . L 5 HOH A 13 514 20 HOH HOH . L 5 HOH A 14 515 21 HOH HOH . L 5 HOH A 15 516 24 HOH HOH . L 5 HOH A 16 517 25 HOH HOH . L 5 HOH A 17 518 26 HOH HOH . L 5 HOH A 18 519 28 HOH HOH . L 5 HOH A 19 520 29 HOH HOH . L 5 HOH A 20 521 31 HOH HOH . L 5 HOH A 21 522 32 HOH HOH . L 5 HOH A 22 523 36 HOH HOH . L 5 HOH A 23 524 37 HOH HOH . L 5 HOH A 24 525 38 HOH HOH . L 5 HOH A 25 526 41 HOH HOH . L 5 HOH A 26 527 42 HOH HOH . L 5 HOH A 27 528 43 HOH HOH . L 5 HOH A 28 529 44 HOH HOH . L 5 HOH A 29 530 45 HOH HOH . L 5 HOH A 30 531 46 HOH HOH . L 5 HOH A 31 532 47 HOH HOH . L 5 HOH A 32 533 49 HOH HOH . L 5 HOH A 33 534 50 HOH HOH . L 5 HOH A 34 535 51 HOH HOH . L 5 HOH A 35 536 52 HOH HOH . L 5 HOH A 36 537 54 HOH HOH . L 5 HOH A 37 538 55 HOH HOH . L 5 HOH A 38 539 56 HOH HOH . L 5 HOH A 39 540 57 HOH HOH . L 5 HOH A 40 541 58 HOH HOH . L 5 HOH A 41 542 59 HOH HOH . L 5 HOH A 42 543 60 HOH HOH . L 5 HOH A 43 544 61 HOH HOH . L 5 HOH A 44 545 62 HOH HOH . L 5 HOH A 45 546 65 HOH HOH . L 5 HOH A 46 547 66 HOH HOH . L 5 HOH A 47 548 67 HOH HOH . L 5 HOH A 48 549 68 HOH HOH . L 5 HOH A 49 550 69 HOH HOH . L 5 HOH A 50 551 70 HOH HOH . L 5 HOH A 51 552 71 HOH HOH . L 5 HOH A 52 553 72 HOH HOH . L 5 HOH A 53 554 73 HOH HOH . L 5 HOH A 54 555 74 HOH HOH . L 5 HOH A 55 556 76 HOH HOH . L 5 HOH A 56 557 77 HOH HOH . L 5 HOH A 57 558 78 HOH HOH . L 5 HOH A 58 559 79 HOH HOH . L 5 HOH A 59 560 81 HOH HOH . L 5 HOH A 60 561 83 HOH HOH . L 5 HOH A 61 562 85 HOH HOH . L 5 HOH A 62 563 86 HOH HOH . L 5 HOH A 63 564 87 HOH HOH . L 5 HOH A 64 565 88 HOH HOH . L 5 HOH A 65 566 89 HOH HOH . L 5 HOH A 66 567 90 HOH HOH . L 5 HOH A 67 568 91 HOH HOH . L 5 HOH A 68 569 92 HOH HOH . L 5 HOH A 69 570 93 HOH HOH . L 5 HOH A 70 571 101 HOH HOH . L 5 HOH A 71 572 103 HOH HOH . L 5 HOH A 72 573 104 HOH HOH . L 5 HOH A 73 574 107 HOH HOH . L 5 HOH A 74 575 108 HOH HOH . L 5 HOH A 75 576 112 HOH HOH . L 5 HOH A 76 577 113 HOH HOH . L 5 HOH A 77 578 114 HOH HOH . L 5 HOH A 78 579 115 HOH HOH . L 5 HOH A 79 580 127 HOH HOH . L 5 HOH A 80 581 128 HOH HOH . L 5 HOH A 81 582 129 HOH HOH . L 5 HOH A 82 583 130 HOH HOH . L 5 HOH A 83 584 131 HOH HOH . L 5 HOH A 84 585 132 HOH HOH . L 5 HOH A 85 586 133 HOH HOH . L 5 HOH A 86 587 134 HOH HOH . L 5 HOH A 87 588 135 HOH HOH . L 5 HOH A 88 589 136 HOH HOH . L 5 HOH A 89 590 141 HOH HOH . L 5 HOH A 90 591 142 HOH HOH . L 5 HOH A 91 592 143 HOH HOH . L 5 HOH A 92 593 145 HOH HOH . L 5 HOH A 93 594 146 HOH HOH . L 5 HOH A 94 595 147 HOH HOH . L 5 HOH A 95 596 149 HOH HOH . L 5 HOH A 96 597 151 HOH HOH . L 5 HOH A 97 598 152 HOH HOH . L 5 HOH A 98 599 153 HOH HOH . L 5 HOH A 99 600 154 HOH HOH . L 5 HOH A 100 601 155 HOH HOH . L 5 HOH A 101 602 156 HOH HOH . L 5 HOH A 102 603 157 HOH HOH . L 5 HOH A 103 604 161 HOH HOH . L 5 HOH A 104 605 162 HOH HOH . L 5 HOH A 105 606 163 HOH HOH . L 5 HOH A 106 607 165 HOH HOH . L 5 HOH A 107 608 168 HOH HOH . L 5 HOH A 108 609 169 HOH HOH . L 5 HOH A 109 610 171 HOH HOH . L 5 HOH A 110 611 175 HOH HOH . L 5 HOH A 111 612 176 HOH HOH . L 5 HOH A 112 613 179 HOH HOH . L 5 HOH A 113 614 180 HOH HOH . L 5 HOH A 114 615 182 HOH HOH . L 5 HOH A 115 616 184 HOH HOH . L 5 HOH A 116 617 189 HOH HOH . L 5 HOH A 117 618 190 HOH HOH . L 5 HOH A 118 619 191 HOH HOH . L 5 HOH A 119 620 192 HOH HOH . L 5 HOH A 120 621 193 HOH HOH . L 5 HOH A 121 622 194 HOH HOH . L 5 HOH A 122 623 196 HOH HOH . L 5 HOH A 123 624 197 HOH HOH . L 5 HOH A 124 625 198 HOH HOH . L 5 HOH A 125 626 200 HOH HOH . L 5 HOH A 126 627 201 HOH HOH . L 5 HOH A 127 628 203 HOH HOH . L 5 HOH A 128 629 206 HOH HOH . L 5 HOH A 129 630 207 HOH HOH . L 5 HOH A 130 631 210 HOH HOH . L 5 HOH A 131 632 213 HOH HOH . L 5 HOH A 132 633 214 HOH HOH . L 5 HOH A 133 634 216 HOH HOH . L 5 HOH A 134 635 217 HOH HOH . L 5 HOH A 135 636 219 HOH HOH . L 5 HOH A 136 637 220 HOH HOH . L 5 HOH A 137 638 221 HOH HOH . L 5 HOH A 138 639 223 HOH HOH . L 5 HOH A 139 640 226 HOH HOH . L 5 HOH A 140 641 227 HOH HOH . L 5 HOH A 141 642 228 HOH HOH . L 5 HOH A 142 643 229 HOH HOH . L 5 HOH A 143 644 230 HOH HOH . M 5 HOH B 1 803 7 HOH HOH . M 5 HOH B 2 804 9 HOH HOH . M 5 HOH B 3 805 11 HOH HOH . M 5 HOH B 4 806 12 HOH HOH . M 5 HOH B 5 807 14 HOH HOH . M 5 HOH B 6 808 18 HOH HOH . M 5 HOH B 7 809 19 HOH HOH . M 5 HOH B 8 810 22 HOH HOH . M 5 HOH B 9 811 23 HOH HOH . M 5 HOH B 10 812 27 HOH HOH . M 5 HOH B 11 813 30 HOH HOH . M 5 HOH B 12 814 33 HOH HOH . M 5 HOH B 13 815 34 HOH HOH . M 5 HOH B 14 816 35 HOH HOH . M 5 HOH B 15 817 39 HOH HOH . M 5 HOH B 16 818 40 HOH HOH . M 5 HOH B 17 819 48 HOH HOH . M 5 HOH B 18 820 53 HOH HOH . M 5 HOH B 19 821 63 HOH HOH . M 5 HOH B 20 822 64 HOH HOH . M 5 HOH B 21 823 75 HOH HOH . M 5 HOH B 22 824 80 HOH HOH . M 5 HOH B 23 825 82 HOH HOH . M 5 HOH B 24 826 84 HOH HOH . M 5 HOH B 25 827 94 HOH HOH . M 5 HOH B 26 828 95 HOH HOH . M 5 HOH B 27 829 96 HOH HOH . M 5 HOH B 28 830 97 HOH HOH . M 5 HOH B 29 831 98 HOH HOH . M 5 HOH B 30 832 99 HOH HOH . M 5 HOH B 31 833 100 HOH HOH . M 5 HOH B 32 834 102 HOH HOH . M 5 HOH B 33 835 105 HOH HOH . M 5 HOH B 34 836 106 HOH HOH . M 5 HOH B 35 837 109 HOH HOH . M 5 HOH B 36 838 110 HOH HOH . M 5 HOH B 37 839 111 HOH HOH . M 5 HOH B 38 840 116 HOH HOH . M 5 HOH B 39 841 117 HOH HOH . M 5 HOH B 40 842 118 HOH HOH . M 5 HOH B 41 843 119 HOH HOH . M 5 HOH B 42 844 120 HOH HOH . M 5 HOH B 43 845 121 HOH HOH . M 5 HOH B 44 846 122 HOH HOH . M 5 HOH B 45 847 123 HOH HOH . M 5 HOH B 46 848 124 HOH HOH . M 5 HOH B 47 849 125 HOH HOH . M 5 HOH B 48 850 126 HOH HOH . M 5 HOH B 49 851 137 HOH HOH . M 5 HOH B 50 852 138 HOH HOH . M 5 HOH B 51 853 139 HOH HOH . M 5 HOH B 52 854 140 HOH HOH . M 5 HOH B 53 855 144 HOH HOH . M 5 HOH B 54 856 148 HOH HOH . M 5 HOH B 55 857 150 HOH HOH . M 5 HOH B 56 858 158 HOH HOH . M 5 HOH B 57 859 159 HOH HOH . M 5 HOH B 58 860 160 HOH HOH . M 5 HOH B 59 861 164 HOH HOH . M 5 HOH B 60 862 166 HOH HOH . M 5 HOH B 61 863 167 HOH HOH . M 5 HOH B 62 864 170 HOH HOH . M 5 HOH B 63 865 172 HOH HOH . M 5 HOH B 64 866 173 HOH HOH . M 5 HOH B 65 867 174 HOH HOH . M 5 HOH B 66 868 177 HOH HOH . M 5 HOH B 67 869 178 HOH HOH . M 5 HOH B 68 870 181 HOH HOH . M 5 HOH B 69 871 183 HOH HOH . M 5 HOH B 70 872 185 HOH HOH . M 5 HOH B 71 873 186 HOH HOH . M 5 HOH B 72 874 187 HOH HOH . M 5 HOH B 73 875 188 HOH HOH . M 5 HOH B 74 876 195 HOH HOH . M 5 HOH B 75 877 199 HOH HOH . M 5 HOH B 76 878 202 HOH HOH . M 5 HOH B 77 879 204 HOH HOH . M 5 HOH B 78 880 205 HOH HOH . M 5 HOH B 79 881 208 HOH HOH . M 5 HOH B 80 882 209 HOH HOH . M 5 HOH B 81 883 211 HOH HOH . M 5 HOH B 82 884 212 HOH HOH . M 5 HOH B 83 885 215 HOH HOH . M 5 HOH B 84 886 218 HOH HOH . M 5 HOH B 85 887 222 HOH HOH . M 5 HOH B 86 888 224 HOH HOH . M 5 HOH B 87 889 225 HOH HOH . M 5 HOH B 88 890 231 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 PG4 . . . J 4 111.051 5.838 39.36 1 63.3 ? O2 PG4 701 B 1 HETATM 2 C C3 PG4 . . . J 4 111.237 6.162 40.739 1 65.12 ? C3 PG4 701 B 1 HETATM 3 C C4 PG4 . . . J 4 111.644 4.902 41.507 1 66.79 ? C4 PG4 701 B 1 HETATM 4 O O3 PG4 . . . J 4 112.866 4.383 40.964 1 68.05 ? O3 PG4 701 B 1 HETATM 5 C C5 PG4 . . . J 4 113.25 3.212 41.689 1 67.92 ? C5 PG4 701 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #