data_1TDV # _model_server_result.job_id OyCIZnIOEBTvGiXmvbQ6Xw _model_server_result.datetime_utc '2024-11-28 15:44:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tdv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1005}' # _entry.id 1TDV # _exptl.entry_id 1TDV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1TDV _cell.length_a 52.29 _cell.length_b 52.29 _cell.length_c 47.81 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TDV _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 27 1_555 A SG CYS 115 A CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? disulf ? disulf2 A SG CYS 28 A CYS 29 1_555 A SG CYS 44 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? disulf ? disulf3 A SG CYS 43 A CYS 44 1_555 A SG CYS 95 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf4 A SG CYS 49 A CYS 50 1_555 A SG CYS 121 A CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf5 A SG CYS 50 A CYS 51 1_555 A SG CYS 88 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf6 A SG CYS 57 A CYS 61 1_555 A SG CYS 81 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? disulf ? disulf7 A SG CYS 75 A CYS 84 1_555 A SG CYS 86 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 1TDV _atom_sites.fract_transf_matrix[1][1] 0.019124 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019124 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020916 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 1001 1001 SO4 SO4 . D 3 SO4 A 1 1002 1002 SO4 SO4 . E 3 SO4 A 1 1003 1003 SO4 SO4 . F 3 SO4 A 1 1004 1004 SO4 SO4 . G 3 SO4 A 1 1005 1005 SO4 SO4 . H 3 SO4 A 1 1006 1006 SO4 SO4 . I 4 HOH A 1 1007 1 HOH HOH . I 4 HOH A 2 1008 2 HOH HOH . I 4 HOH A 3 1009 3 HOH HOH . I 4 HOH A 4 1010 4 HOH HOH . I 4 HOH A 5 1011 5 HOH HOH . I 4 HOH A 6 1012 6 HOH HOH . I 4 HOH A 7 1013 7 HOH HOH . I 4 HOH A 8 1014 8 HOH HOH . I 4 HOH A 9 1015 9 HOH HOH . I 4 HOH A 10 1016 10 HOH HOH . I 4 HOH A 11 1017 11 HOH HOH . I 4 HOH A 12 1018 12 HOH HOH . I 4 HOH A 13 1019 13 HOH HOH . I 4 HOH A 14 1020 14 HOH HOH . I 4 HOH A 15 1021 15 HOH HOH . I 4 HOH A 16 1022 16 HOH HOH . I 4 HOH A 17 1023 17 HOH HOH . I 4 HOH A 18 1024 18 HOH HOH . I 4 HOH A 19 1025 19 HOH HOH . I 4 HOH A 20 1026 20 HOH HOH . I 4 HOH A 21 1027 21 HOH HOH . I 4 HOH A 22 1028 22 HOH HOH . I 4 HOH A 23 1029 23 HOH HOH . I 4 HOH A 24 1030 24 HOH HOH . I 4 HOH A 25 1031 25 HOH HOH . I 4 HOH A 26 1032 26 HOH HOH . I 4 HOH A 27 1033 27 HOH HOH . I 4 HOH A 28 1034 28 HOH HOH . I 4 HOH A 29 1035 29 HOH HOH . I 4 HOH A 30 1036 30 HOH HOH . I 4 HOH A 31 1037 31 HOH HOH . I 4 HOH A 32 1038 32 HOH HOH . I 4 HOH A 33 1039 33 HOH HOH . I 4 HOH A 34 1040 34 HOH HOH . I 4 HOH A 35 1041 35 HOH HOH . I 4 HOH A 36 1042 36 HOH HOH . I 4 HOH A 37 1043 37 HOH HOH . I 4 HOH A 38 1044 38 HOH HOH . I 4 HOH A 39 1045 39 HOH HOH . I 4 HOH A 40 1046 40 HOH HOH . I 4 HOH A 41 1047 41 HOH HOH . I 4 HOH A 42 1048 42 HOH HOH . I 4 HOH A 43 1049 43 HOH HOH . I 4 HOH A 44 1050 44 HOH HOH . I 4 HOH A 45 1051 45 HOH HOH . I 4 HOH A 46 1052 46 HOH HOH . I 4 HOH A 47 1053 47 HOH HOH . I 4 HOH A 48 1054 48 HOH HOH . I 4 HOH A 49 1055 49 HOH HOH . I 4 HOH A 50 1056 50 HOH HOH . I 4 HOH A 51 1057 51 HOH HOH . I 4 HOH A 52 1058 52 HOH HOH . I 4 HOH A 53 1059 53 HOH HOH . I 4 HOH A 54 1060 54 HOH HOH . I 4 HOH A 55 1061 55 HOH HOH . I 4 HOH A 56 1062 56 HOH HOH . I 4 HOH A 57 1063 57 HOH HOH . I 4 HOH A 58 1064 58 HOH HOH . I 4 HOH A 59 1065 59 HOH HOH . I 4 HOH A 60 1066 60 HOH HOH . I 4 HOH A 61 1067 61 HOH HOH . I 4 HOH A 62 1068 62 HOH HOH . I 4 HOH A 63 1069 63 HOH HOH . I 4 HOH A 64 1070 64 HOH HOH . I 4 HOH A 65 1071 65 HOH HOH . I 4 HOH A 66 1072 66 HOH HOH . I 4 HOH A 67 1073 67 HOH HOH . I 4 HOH A 68 1074 68 HOH HOH . I 4 HOH A 69 1075 69 HOH HOH . I 4 HOH A 70 1076 70 HOH HOH . I 4 HOH A 71 1077 71 HOH HOH . I 4 HOH A 72 1078 72 HOH HOH . I 4 HOH A 73 1079 73 HOH HOH . I 4 HOH A 74 1080 74 HOH HOH . I 4 HOH A 75 1081 75 HOH HOH . I 4 HOH A 76 1082 76 HOH HOH . I 4 HOH A 77 1083 77 HOH HOH . I 4 HOH A 78 1084 78 HOH HOH . I 4 HOH A 79 1085 79 HOH HOH . I 4 HOH A 80 1086 80 HOH HOH . I 4 HOH A 81 1087 81 HOH HOH . I 4 HOH A 82 1088 82 HOH HOH . I 4 HOH A 83 1089 83 HOH HOH . I 4 HOH A 84 1090 84 HOH HOH . I 4 HOH A 85 1091 85 HOH HOH . I 4 HOH A 86 1092 86 HOH HOH . I 4 HOH A 87 1093 87 HOH HOH . I 4 HOH A 88 1094 88 HOH HOH . I 4 HOH A 89 1095 89 HOH HOH . I 4 HOH A 90 1096 91 HOH HOH . I 4 HOH A 91 1097 92 HOH HOH . I 4 HOH A 92 1098 93 HOH HOH . I 4 HOH A 93 1099 94 HOH HOH . I 4 HOH A 94 1100 95 HOH HOH . I 4 HOH A 95 1101 96 HOH HOH . I 4 HOH A 96 1102 97 HOH HOH . I 4 HOH A 97 1103 98 HOH HOH . I 4 HOH A 98 1104 99 HOH HOH . I 4 HOH A 99 1105 100 HOH HOH . I 4 HOH A 100 1106 101 HOH HOH . I 4 HOH A 101 1107 102 HOH HOH . I 4 HOH A 102 1108 103 HOH HOH . I 4 HOH A 103 1109 104 HOH HOH . I 4 HOH A 104 1110 105 HOH HOH . I 4 HOH A 105 1111 106 HOH HOH . I 4 HOH A 106 1112 107 HOH HOH . I 4 HOH A 107 1113 108 HOH HOH . I 4 HOH A 108 1114 109 HOH HOH . I 4 HOH A 109 1115 110 HOH HOH . I 4 HOH A 110 1116 111 HOH HOH . I 4 HOH A 111 1117 112 HOH HOH . I 4 HOH A 112 1118 113 HOH HOH . I 4 HOH A 113 1119 114 HOH HOH . I 4 HOH A 114 1120 115 HOH HOH . I 4 HOH A 115 1121 116 HOH HOH . I 4 HOH A 116 1122 117 HOH HOH . I 4 HOH A 117 1123 118 HOH HOH . I 4 HOH A 118 1124 119 HOH HOH . I 4 HOH A 119 1125 120 HOH HOH . I 4 HOH A 120 1126 121 HOH HOH . I 4 HOH A 121 1127 122 HOH HOH . I 4 HOH A 122 1128 123 HOH HOH . I 4 HOH A 123 1129 124 HOH HOH . I 4 HOH A 124 1130 125 HOH HOH . I 4 HOH A 125 1131 126 HOH HOH . I 4 HOH A 126 1132 127 HOH HOH . I 4 HOH A 127 1133 128 HOH HOH . I 4 HOH A 128 1134 129 HOH HOH . I 4 HOH A 129 1135 130 HOH HOH . I 4 HOH A 130 1136 131 HOH HOH . I 4 HOH A 131 1137 133 HOH HOH . I 4 HOH A 132 1138 134 HOH HOH . I 4 HOH A 133 1139 135 HOH HOH . I 4 HOH A 134 1140 136 HOH HOH . I 4 HOH A 135 1141 137 HOH HOH . I 4 HOH A 136 1142 138 HOH HOH . I 4 HOH A 137 1143 139 HOH HOH . I 4 HOH A 138 1144 140 HOH HOH . I 4 HOH A 139 1145 141 HOH HOH . I 4 HOH A 140 1146 142 HOH HOH . I 4 HOH A 141 1147 143 HOH HOH . I 4 HOH A 142 1148 144 HOH HOH . I 4 HOH A 143 1149 145 HOH HOH . I 4 HOH A 144 1150 146 HOH HOH . I 4 HOH A 145 1151 147 HOH HOH . I 4 HOH A 146 1152 149 HOH HOH . I 4 HOH A 147 1153 150 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . G 3 -9.945 30.303 4.426 1 50.17 ? S SO4 1005 A 1 HETATM 2 O O1 SO4 . . . G 3 -9.806 30.209 5.885 1 50.38 ? O1 SO4 1005 A 1 HETATM 3 O O2 SO4 . . . G 3 -11.213 29.7 4.03 1 50.23 ? O2 SO4 1005 A 1 HETATM 4 O O3 SO4 . . . G 3 -8.833 29.613 3.786 1 49.54 ? O3 SO4 1005 A 1 HETATM 5 O O4 SO4 . . . G 3 -9.93 31.704 4.021 1 50.78 ? O4 SO4 1005 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #