data_1TE1 # _model_server_result.job_id 6oP9hHoeTe08tbxKFEjy7Q _model_server_result.datetime_utc '2025-01-23 15:33:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1te1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":208}' # _entry.id 1TE1 # _exptl.entry_id 1TE1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1TE1 _cell.length_a 98.748 _cell.length_b 98.748 _cell.length_c 112.095 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TE1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 25 A CYS 25 1_555 A SG CYS 66 A CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 164 A CYS 164 1_555 A SG CYS 195 A CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? covale ? covale1 A ND2 ASN 89 A ASN 89 1_555 D C1 NAG . A NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale2 A ND2 ASN 265 A ASN 265 1_555 C C1 NAG . A NAG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 1TE1 _atom_sites.fract_transf_matrix[1][1] 0.010127 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010127 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008921 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG A 1 900 900 NAG NAG . D 3 NAG A 1 901 901 NAG NAG . E 4 EDO A 1 902 1 EDO EGL . F 4 EDO A 1 903 2 EDO EGL . G 4 EDO A 1 904 3 EDO EGL . H 4 EDO A 1 905 4 EDO EGL . I 4 EDO A 1 906 5 EDO EGL . J 4 EDO A 1 907 9 EDO EGL . K 4 EDO A 1 908 12 EDO EGL . L 4 EDO B 1 207 7 EDO EGL . M 4 EDO B 1 208 8 EDO EGL . N 4 EDO B 1 210 10 EDO EGL . O 4 EDO B 1 211 11 EDO EGL . P 5 HOH A 1 909 1 HOH HOH . P 5 HOH A 2 910 2 HOH HOH . P 5 HOH A 3 911 3 HOH HOH . P 5 HOH A 4 912 4 HOH HOH . P 5 HOH A 5 913 5 HOH HOH . P 5 HOH A 6 914 6 HOH HOH . P 5 HOH A 7 915 7 HOH HOH . P 5 HOH A 8 916 8 HOH HOH . P 5 HOH A 9 917 9 HOH HOH . P 5 HOH A 10 918 10 HOH HOH . P 5 HOH A 11 919 11 HOH HOH . P 5 HOH A 12 920 12 HOH HOH . P 5 HOH A 13 921 13 HOH HOH . P 5 HOH A 14 922 14 HOH HOH . P 5 HOH A 15 923 15 HOH HOH . P 5 HOH A 16 924 16 HOH HOH . P 5 HOH A 17 925 17 HOH HOH . P 5 HOH A 18 926 18 HOH HOH . P 5 HOH A 19 927 19 HOH HOH . P 5 HOH A 20 928 20 HOH HOH . P 5 HOH A 21 929 21 HOH HOH . P 5 HOH A 22 930 22 HOH HOH . P 5 HOH A 23 931 23 HOH HOH . P 5 HOH A 24 932 24 HOH HOH . P 5 HOH A 25 933 25 HOH HOH . P 5 HOH A 26 934 26 HOH HOH . P 5 HOH A 27 935 27 HOH HOH . P 5 HOH A 28 936 29 HOH HOH . P 5 HOH A 29 937 30 HOH HOH . P 5 HOH A 30 938 31 HOH HOH . P 5 HOH A 31 939 32 HOH HOH . P 5 HOH A 32 940 35 HOH HOH . P 5 HOH A 33 941 43 HOH HOH . P 5 HOH A 34 942 44 HOH HOH . P 5 HOH A 35 943 45 HOH HOH . P 5 HOH A 36 944 47 HOH HOH . P 5 HOH A 37 945 48 HOH HOH . P 5 HOH A 38 946 49 HOH HOH . P 5 HOH A 39 947 50 HOH HOH . P 5 HOH A 40 948 51 HOH HOH . P 5 HOH A 41 949 53 HOH HOH . P 5 HOH A 42 950 54 HOH HOH . P 5 HOH A 43 951 55 HOH HOH . P 5 HOH A 44 952 56 HOH HOH . P 5 HOH A 45 953 57 HOH HOH . P 5 HOH A 46 954 58 HOH HOH . P 5 HOH A 47 955 59 HOH HOH . P 5 HOH A 48 956 64 HOH HOH . P 5 HOH A 49 957 67 HOH HOH . P 5 HOH A 50 958 68 HOH HOH . P 5 HOH A 51 959 69 HOH HOH . P 5 HOH A 52 960 72 HOH HOH . P 5 HOH A 53 961 74 HOH HOH . P 5 HOH A 54 962 75 HOH HOH . P 5 HOH A 55 963 76 HOH HOH . P 5 HOH A 56 964 78 HOH HOH . P 5 HOH A 57 965 79 HOH HOH . P 5 HOH A 58 966 80 HOH HOH . P 5 HOH A 59 967 83 HOH HOH . P 5 HOH A 60 968 84 HOH HOH . P 5 HOH A 61 969 85 HOH HOH . P 5 HOH A 62 970 86 HOH HOH . P 5 HOH A 63 971 87 HOH HOH . P 5 HOH A 64 972 88 HOH HOH . P 5 HOH A 65 973 89 HOH HOH . P 5 HOH A 66 974 90 HOH HOH . P 5 HOH A 67 975 91 HOH HOH . P 5 HOH A 68 976 92 HOH HOH . P 5 HOH A 69 977 93 HOH HOH . P 5 HOH A 70 978 94 HOH HOH . P 5 HOH A 71 979 95 HOH HOH . P 5 HOH A 72 980 96 HOH HOH . P 5 HOH A 73 981 98 HOH HOH . P 5 HOH A 74 982 100 HOH HOH . P 5 HOH A 75 983 101 HOH HOH . P 5 HOH A 76 984 102 HOH HOH . P 5 HOH A 77 985 103 HOH HOH . P 5 HOH A 78 986 104 HOH HOH . P 5 HOH A 79 987 105 HOH HOH . P 5 HOH A 80 988 107 HOH HOH . P 5 HOH A 81 989 108 HOH HOH . P 5 HOH A 82 990 109 HOH HOH . P 5 HOH A 83 991 110 HOH HOH . P 5 HOH A 84 992 111 HOH HOH . P 5 HOH A 85 993 112 HOH HOH . P 5 HOH A 86 994 113 HOH HOH . P 5 HOH A 87 995 114 HOH HOH . P 5 HOH A 88 996 115 HOH HOH . P 5 HOH A 89 997 116 HOH HOH . P 5 HOH A 90 998 117 HOH HOH . P 5 HOH A 91 999 120 HOH HOH . P 5 HOH A 92 1000 122 HOH HOH . P 5 HOH A 93 1001 124 HOH HOH . P 5 HOH A 94 1002 125 HOH HOH . P 5 HOH A 95 1003 127 HOH HOH . P 5 HOH A 96 1004 131 HOH HOH . P 5 HOH A 97 1005 134 HOH HOH . P 5 HOH A 98 1006 135 HOH HOH . P 5 HOH A 99 1007 136 HOH HOH . P 5 HOH A 100 1008 137 HOH HOH . P 5 HOH A 101 1009 138 HOH HOH . P 5 HOH A 102 1010 139 HOH HOH . P 5 HOH A 103 1011 140 HOH HOH . P 5 HOH A 104 1012 142 HOH HOH . P 5 HOH A 105 1013 143 HOH HOH . P 5 HOH A 106 1014 145 HOH HOH . P 5 HOH A 107 1015 146 HOH HOH . P 5 HOH A 108 1016 148 HOH HOH . P 5 HOH A 109 1017 150 HOH HOH . P 5 HOH A 110 1018 151 HOH HOH . P 5 HOH A 111 1019 152 HOH HOH . P 5 HOH A 112 1020 153 HOH HOH . P 5 HOH A 113 1021 154 HOH HOH . P 5 HOH A 114 1022 155 HOH HOH . P 5 HOH A 115 1023 157 HOH HOH . P 5 HOH A 116 1024 158 HOH HOH . P 5 HOH A 117 1025 161 HOH HOH . P 5 HOH A 118 1026 163 HOH HOH . P 5 HOH A 119 1027 166 HOH HOH . P 5 HOH A 120 1028 168 HOH HOH . P 5 HOH A 121 1029 169 HOH HOH . P 5 HOH A 122 1030 170 HOH HOH . P 5 HOH A 123 1031 175 HOH HOH . P 5 HOH A 124 1032 176 HOH HOH . P 5 HOH A 125 1033 177 HOH HOH . P 5 HOH A 126 1034 178 HOH HOH . P 5 HOH A 127 1035 180 HOH HOH . P 5 HOH A 128 1036 181 HOH HOH . P 5 HOH A 129 1037 182 HOH HOH . P 5 HOH A 130 1038 183 HOH HOH . P 5 HOH A 131 1039 184 HOH HOH . P 5 HOH A 132 1040 185 HOH HOH . P 5 HOH A 133 1041 186 HOH HOH . P 5 HOH A 134 1042 188 HOH HOH . P 5 HOH A 135 1043 189 HOH HOH . P 5 HOH A 136 1044 192 HOH HOH . P 5 HOH A 137 1045 194 HOH HOH . P 5 HOH A 138 1046 196 HOH HOH . P 5 HOH A 139 1047 199 HOH HOH . Q 5 HOH B 1 212 28 HOH HOH . Q 5 HOH B 2 213 33 HOH HOH . Q 5 HOH B 3 214 34 HOH HOH . Q 5 HOH B 4 215 36 HOH HOH . Q 5 HOH B 5 216 37 HOH HOH . Q 5 HOH B 6 217 38 HOH HOH . Q 5 HOH B 7 218 39 HOH HOH . Q 5 HOH B 8 219 40 HOH HOH . Q 5 HOH B 9 220 41 HOH HOH . Q 5 HOH B 10 221 42 HOH HOH . Q 5 HOH B 11 222 46 HOH HOH . Q 5 HOH B 12 223 52 HOH HOH . Q 5 HOH B 13 224 60 HOH HOH . Q 5 HOH B 14 225 61 HOH HOH . Q 5 HOH B 15 226 62 HOH HOH . Q 5 HOH B 16 227 63 HOH HOH . Q 5 HOH B 17 228 65 HOH HOH . Q 5 HOH B 18 229 66 HOH HOH . Q 5 HOH B 19 230 70 HOH HOH . Q 5 HOH B 20 231 71 HOH HOH . Q 5 HOH B 21 232 73 HOH HOH . Q 5 HOH B 22 233 77 HOH HOH . Q 5 HOH B 23 234 81 HOH HOH . Q 5 HOH B 24 235 82 HOH HOH . Q 5 HOH B 25 236 97 HOH HOH . Q 5 HOH B 26 237 99 HOH HOH . Q 5 HOH B 27 238 106 HOH HOH . Q 5 HOH B 28 239 118 HOH HOH . Q 5 HOH B 29 240 119 HOH HOH . Q 5 HOH B 30 241 121 HOH HOH . Q 5 HOH B 31 242 123 HOH HOH . Q 5 HOH B 32 243 126 HOH HOH . Q 5 HOH B 33 244 128 HOH HOH . Q 5 HOH B 34 245 129 HOH HOH . Q 5 HOH B 35 246 130 HOH HOH . Q 5 HOH B 36 247 132 HOH HOH . Q 5 HOH B 37 248 133 HOH HOH . Q 5 HOH B 38 249 141 HOH HOH . Q 5 HOH B 39 250 144 HOH HOH . Q 5 HOH B 40 251 147 HOH HOH . Q 5 HOH B 41 252 149 HOH HOH . Q 5 HOH B 42 253 156 HOH HOH . Q 5 HOH B 43 254 159 HOH HOH . Q 5 HOH B 44 255 160 HOH HOH . Q 5 HOH B 45 256 162 HOH HOH . Q 5 HOH B 46 257 164 HOH HOH . Q 5 HOH B 47 258 165 HOH HOH . Q 5 HOH B 48 259 167 HOH HOH . Q 5 HOH B 49 260 171 HOH HOH . Q 5 HOH B 50 261 172 HOH HOH . Q 5 HOH B 51 262 173 HOH HOH . Q 5 HOH B 52 263 174 HOH HOH . Q 5 HOH B 53 264 179 HOH HOH . Q 5 HOH B 54 265 187 HOH HOH . Q 5 HOH B 55 266 190 HOH HOH . Q 5 HOH B 56 267 191 HOH HOH . Q 5 HOH B 57 268 193 HOH HOH . Q 5 HOH B 58 269 195 HOH HOH . Q 5 HOH B 59 270 197 HOH HOH . Q 5 HOH B 60 271 198 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . M 4 24.178 95.989 54.827 1 82.74 ? C1 EDO 208 B 1 HETATM 2 O O1 EDO . . . M 4 25.594 95.984 54.809 1 81.99 ? O1 EDO 208 B 1 HETATM 3 C C2 EDO . . . M 4 23.656 95.394 53.527 1 83.11 ? C2 EDO 208 B 1 HETATM 4 O O2 EDO . . . M 4 22.307 95.789 53.315 1 83.32 ? O2 EDO 208 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #