data_1TG2 # _model_server_result.job_id jcFMh9oDRlc96wQ0SEBJsg _model_server_result.datetime_utc '2024-11-22 08:03:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tg2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":426}' # _entry.id 1TG2 # _exptl.entry_id 1TG2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 239.231 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-6-(1,2-DIHYDROXY-PROPYL)-7,8-DIHYDRO-6H-PTERIDIN-4-ONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1TG2 _cell.length_a 66.534 _cell.length_b 107.755 _cell.length_c 124.282 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TG2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 169 A HIS 285 1_555 B FE FE . A FE 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc2 A NE2 HIS 174 A HIS 290 1_555 B FE FE . A FE 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc3 A OE2 GLU 214 A GLU 330 1_555 B FE FE . A FE 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.88 ? metalc ? metalc4 B FE FE . A FE 425 1_555 D O HOH . A HOH 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.629 ? metalc ? metalc5 B FE FE . A FE 425 1_555 D O HOH . A HOH 484 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? # _chem_comp.formula 'C9 H13 N5 O3' _chem_comp.formula_weight 239.231 _chem_comp.id H2B _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-6-(1,2-DIHYDROXY-PROPYL)-7,8-DIHYDRO-6H-PTERIDIN-4-ONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'QUINONOID 7,8-TETRAHYDROBIOPTERIN' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 H2B sing 129 n n N1 C8A H2B doub 130 n n C2 N2 H2B sing 131 n n C2 N3 H2B doub 132 n n N2 H22 H2B sing 133 n n N2 H21 H2B sing 134 n n N3 C4 H2B sing 135 n n C4 O4 H2B doub 136 n n C4 C4A H2B sing 137 n n C4A C8A H2B sing 138 n n C4A N5 H2B doub 139 n n C8A N8 H2B sing 140 n n N5 C6 H2B sing 141 n n N8 C7 H2B sing 142 n n N8 H8 H2B sing 143 n n C6 C7 H2B sing 144 n n C6 C9 H2B sing 145 n n C6 H6 H2B sing 146 n n C7 H71 H2B sing 147 n n C7 H72 H2B sing 148 n n C9 O9 H2B sing 149 n n C9 C10 H2B sing 150 n n C9 H9 H2B sing 151 n n O9 H9O1 H2B sing 152 n n C10 C11 H2B sing 153 n n C10 O10 H2B sing 154 n n C10 H10 H2B sing 155 n n C11 H113 H2B sing 156 n n C11 H112 H2B sing 157 n n C11 H111 H2B sing 158 n n O10 H1O1 H2B sing 159 n n # _atom_sites.entry_id 1TG2 _atom_sites.fract_transf_matrix[1][1] 0.01503 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00928 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008046 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 425 425 FE FE . C 3 H2B A 1 426 426 H2B H2B . D 4 HOH A 1 427 427 HOH WAT . D 4 HOH A 2 428 428 HOH WAT . D 4 HOH A 3 429 429 HOH WAT . D 4 HOH A 4 430 430 HOH WAT . D 4 HOH A 5 431 431 HOH WAT . D 4 HOH A 6 432 432 HOH WAT . D 4 HOH A 7 433 433 HOH WAT . D 4 HOH A 8 434 434 HOH WAT . D 4 HOH A 9 435 435 HOH WAT . D 4 HOH A 10 436 436 HOH WAT . D 4 HOH A 11 437 437 HOH WAT . D 4 HOH A 12 439 439 HOH WAT . D 4 HOH A 13 440 440 HOH WAT . D 4 HOH A 14 441 441 HOH WAT . D 4 HOH A 15 442 442 HOH WAT . D 4 HOH A 16 444 444 HOH WAT . D 4 HOH A 17 445 445 HOH WAT . D 4 HOH A 18 446 446 HOH WAT . D 4 HOH A 19 447 447 HOH WAT . D 4 HOH A 20 448 448 HOH WAT . D 4 HOH A 21 449 449 HOH WAT . D 4 HOH A 22 450 450 HOH WAT . D 4 HOH A 23 451 451 HOH WAT . D 4 HOH A 24 453 453 HOH WAT . D 4 HOH A 25 454 454 HOH WAT . D 4 HOH A 26 455 455 HOH WAT . D 4 HOH A 27 456 456 HOH WAT . D 4 HOH A 28 457 457 HOH WAT . D 4 HOH A 29 458 458 HOH WAT . D 4 HOH A 30 460 460 HOH WAT . D 4 HOH A 31 461 461 HOH WAT . D 4 HOH A 32 462 462 HOH WAT . D 4 HOH A 33 463 463 HOH WAT . D 4 HOH A 34 464 464 HOH WAT . D 4 HOH A 35 465 465 HOH WAT . D 4 HOH A 36 466 466 HOH WAT . D 4 HOH A 37 468 468 HOH WAT . D 4 HOH A 38 469 469 HOH WAT . D 4 HOH A 39 470 470 HOH WAT . D 4 HOH A 40 471 471 HOH WAT . D 4 HOH A 41 472 472 HOH WAT . D 4 HOH A 42 473 473 HOH WAT . D 4 HOH A 43 474 474 HOH WAT . D 4 HOH A 44 475 475 HOH WAT . D 4 HOH A 45 476 476 HOH WAT . D 4 HOH A 46 477 477 HOH WAT . D 4 HOH A 47 478 478 HOH WAT . D 4 HOH A 48 479 479 HOH WAT . D 4 HOH A 49 482 482 HOH WAT . D 4 HOH A 50 484 484 HOH WAT . D 4 HOH A 51 485 485 HOH WAT . D 4 HOH A 52 486 486 HOH WAT . D 4 HOH A 53 487 487 HOH WAT . D 4 HOH A 54 488 488 HOH WAT . D 4 HOH A 55 489 489 HOH WAT . D 4 HOH A 56 490 490 HOH WAT . D 4 HOH A 57 491 491 HOH WAT . D 4 HOH A 58 492 492 HOH WAT . D 4 HOH A 59 493 493 HOH WAT . D 4 HOH A 60 494 494 HOH WAT . D 4 HOH A 61 495 495 HOH WAT . D 4 HOH A 62 496 496 HOH WAT . D 4 HOH A 63 497 497 HOH WAT . D 4 HOH A 64 498 498 HOH WAT . D 4 HOH A 65 500 500 HOH WAT . D 4 HOH A 66 501 501 HOH WAT . D 4 HOH A 67 503 503 HOH WAT . D 4 HOH A 68 508 508 HOH WAT . D 4 HOH A 69 509 509 HOH WAT . D 4 HOH A 70 510 510 HOH WAT . D 4 HOH A 71 512 512 HOH WAT . D 4 HOH A 72 513 513 HOH WAT . D 4 HOH A 73 516 516 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 H2B . . . C 3 -7.394 22.325 7.637 1 37.75 ? N1 H2B 426 A 1 HETATM 2 C C2 H2B . . . C 3 -6.285 21.565 7.838 1 38.7 ? C2 H2B 426 A 1 HETATM 3 N N2 H2B . . . C 3 -6.433 20.305 8.275 1 38.58 ? N2 H2B 426 A 1 HETATM 4 N N3 H2B . . . C 3 -5.036 22.058 7.608 1 37.58 ? N3 H2B 426 A 1 HETATM 5 C C4 H2B . . . C 3 -4.858 23.331 7.165 1 39.25 ? C4 H2B 426 A 1 HETATM 6 O O4 H2B . . . C 3 -3.746 23.821 6.947 1 38.75 ? O4 H2B 426 A 1 HETATM 7 C C4A H2B . . . C 3 -5.987 24.171 6.927 1 39.08 ? C4A H2B 426 A 1 HETATM 8 C C8A H2B . . . C 3 -7.295 23.607 7.19 1 38.34 ? C8A H2B 426 A 1 HETATM 9 N N5 H2B . . . C 3 -5.848 25.442 6.468 1 39.5 ? N5 H2B 426 A 1 HETATM 10 N N8 H2B . . . C 3 -8.43 24.372 6.988 1 38.26 ? N8 H2B 426 A 1 HETATM 11 C C6 H2B . . . C 3 -7.034 26.281 6.226 1 41.72 ? C6 H2B 426 A 1 HETATM 12 C C7 H2B . . . C 3 -8.374 25.714 6.507 1 39.78 ? C7 H2B 426 A 1 HETATM 13 C C9 H2B . . . C 3 -6.684 27.677 5.67 1 39.67 ? C9 H2B 426 A 1 HETATM 14 O O9 H2B . . . C 3 -7.242 27.776 4.345 1 45.89 ? O9 H2B 426 A 1 HETATM 15 C C10 H2B . . . C 3 -7.203 28.865 6.548 1 43.1 ? C10 H2B 426 A 1 HETATM 16 C C11 H2B . . . C 3 -6.599 28.813 7.921 1 42.33 ? C11 H2B 426 A 1 HETATM 17 O O10 H2B . . . C 3 -8.637 28.803 6.649 1 43.43 ? O10 H2B 426 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 17 #