data_1THA # _model_server_result.job_id EckEVA_WtkMID67pWDSoSg _model_server_result.datetime_utc '2024-12-22 06:25:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tha # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":130}' # _entry.id 1THA # _exptl.entry_id 1THA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 525.077 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "3,3'-DEIODO-THYROXINE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1THA _cell.length_a 43.927 _cell.length_b 86.653 _cell.length_c 65.645 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1THA _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 43.927 86.653 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C15 H13 I2 N O4' _chem_comp.formula_weight 525.077 _chem_comp.id T33 _chem_comp.mon_nstd_flag . _chem_comp.name "3,3'-DEIODO-THYROXINE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 T33 doub 290 n y C1 C6 T33 sing 291 n y C1 C7 T33 sing 292 n n C2 C3 T33 sing 293 n y C2 H2 T33 sing 294 n n C3 I3 T33 sing 295 n n C3 C4 T33 doub 296 n y C4 O4 T33 sing 297 n n C4 C5 T33 sing 298 n y O4 C1' T33 sing 299 n n C5 C6 T33 doub 300 n y C5 H5 T33 sing 301 n n C6 H6 T33 sing 302 n n C7 C8 T33 sing 303 n n C7 H71 T33 sing 304 n n C7 H72 T33 sing 305 n n C8 N8 T33 sing 306 n n C8 C9 T33 sing 307 n n C8 H8 T33 sing 308 n n N8 HN81 T33 sing 309 n n N8 HN82 T33 sing 310 n n C9 O9 T33 doub 311 n n C9 O10 T33 sing 312 n n O10 HO1 T33 sing 313 n n C1' C2' T33 doub 314 n y C1' C6' T33 sing 315 n y C2' C3' T33 sing 316 n y C2' H2' T33 sing 317 n n C3' I3' T33 sing 318 n n C3' C4' T33 doub 319 n y C4' O4' T33 sing 320 n n C4' C5' T33 sing 321 n y O4' "HO'4" T33 sing 322 n n C5' C6' T33 doub 323 n y C5' H5' T33 sing 324 n n C6' H6' T33 sing 325 n n # _atom_sites.entry_id 1THA _atom_sites.fract_transf_matrix[1][1] 0.022765 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01154 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015233 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 T33 A 1 130 130 T33 T33 . D 2 T33 B 1 130 130 T33 T33 . E 3 HOH A 1 131 1 HOH HOH . E 3 HOH A 2 132 2 HOH HOH . E 3 HOH A 3 133 3 HOH HOH . E 3 HOH A 4 134 4 HOH HOH . E 3 HOH A 5 135 5 HOH HOH . E 3 HOH A 6 136 6 HOH HOH . E 3 HOH A 7 137 8 HOH HOH . E 3 HOH A 8 138 9 HOH HOH . E 3 HOH A 9 139 10 HOH HOH . E 3 HOH A 10 140 11 HOH HOH . E 3 HOH A 11 141 12 HOH HOH . E 3 HOH A 12 142 13 HOH HOH . E 3 HOH A 13 143 14 HOH HOH . E 3 HOH A 14 144 15 HOH HOH . E 3 HOH A 15 145 16 HOH HOH . E 3 HOH A 16 146 17 HOH HOH . E 3 HOH A 17 147 18 HOH HOH . E 3 HOH A 18 148 19 HOH HOH . E 3 HOH A 19 149 22 HOH HOH . E 3 HOH A 20 150 23 HOH HOH . E 3 HOH A 21 151 25 HOH HOH . E 3 HOH A 22 152 26 HOH HOH . E 3 HOH A 23 153 27 HOH HOH . E 3 HOH A 24 154 28 HOH HOH . E 3 HOH A 25 155 29 HOH HOH . E 3 HOH A 26 156 30 HOH HOH . E 3 HOH A 27 157 31 HOH HOH . E 3 HOH A 28 158 32 HOH HOH . E 3 HOH A 29 159 33 HOH HOH . E 3 HOH A 30 160 34 HOH HOH . E 3 HOH A 31 161 35 HOH HOH . E 3 HOH A 32 162 36 HOH HOH . E 3 HOH A 33 163 37 HOH HOH . E 3 HOH A 34 164 38 HOH HOH . E 3 HOH A 35 165 40 HOH HOH . E 3 HOH A 36 166 41 HOH HOH . E 3 HOH A 37 167 42 HOH HOH . E 3 HOH A 38 168 43 HOH HOH . E 3 HOH A 39 169 44 HOH HOH . E 3 HOH A 40 170 45 HOH HOH . E 3 HOH A 41 171 46 HOH HOH . E 3 HOH A 42 172 47 HOH HOH . E 3 HOH A 43 173 48 HOH HOH . E 3 HOH A 44 174 49 HOH HOH . E 3 HOH A 45 175 50 HOH HOH . E 3 HOH A 46 176 60 HOH HOH . E 3 HOH A 47 177 65 HOH HOH . E 3 HOH A 48 178 71 HOH HOH . E 3 HOH A 49 179 89 HOH HOH . E 3 HOH A 50 180 91 HOH HOH . F 3 HOH B 1 131 7 HOH HOH . F 3 HOH B 2 132 20 HOH HOH . F 3 HOH B 3 133 21 HOH HOH . F 3 HOH B 4 134 24 HOH HOH . F 3 HOH B 5 135 39 HOH HOH . F 3 HOH B 6 136 51 HOH HOH . F 3 HOH B 7 137 52 HOH HOH . F 3 HOH B 8 138 53 HOH HOH . F 3 HOH B 9 139 54 HOH HOH . F 3 HOH B 10 140 55 HOH HOH . F 3 HOH B 11 141 56 HOH HOH . F 3 HOH B 12 142 57 HOH HOH . F 3 HOH B 13 143 58 HOH HOH . F 3 HOH B 14 144 59 HOH HOH . F 3 HOH B 15 145 61 HOH HOH . F 3 HOH B 16 146 62 HOH HOH . F 3 HOH B 17 147 63 HOH HOH . F 3 HOH B 18 148 64 HOH HOH . F 3 HOH B 19 149 66 HOH HOH . F 3 HOH B 20 150 67 HOH HOH . F 3 HOH B 21 151 68 HOH HOH . F 3 HOH B 22 152 69 HOH HOH . F 3 HOH B 23 153 70 HOH HOH . F 3 HOH B 24 154 72 HOH HOH . F 3 HOH B 25 155 73 HOH HOH . F 3 HOH B 26 156 74 HOH HOH . F 3 HOH B 27 157 75 HOH HOH . F 3 HOH B 28 158 76 HOH HOH . F 3 HOH B 29 159 77 HOH HOH . F 3 HOH B 30 160 78 HOH HOH . F 3 HOH B 31 161 79 HOH HOH . F 3 HOH B 32 162 80 HOH HOH . F 3 HOH B 33 163 81 HOH HOH . F 3 HOH B 34 164 82 HOH HOH . F 3 HOH B 35 165 83 HOH HOH . F 3 HOH B 36 166 84 HOH HOH . F 3 HOH B 37 167 85 HOH HOH . F 3 HOH B 38 168 86 HOH HOH . F 3 HOH B 39 169 87 HOH HOH . F 3 HOH B 40 170 88 HOH HOH . F 3 HOH B 41 171 90 HOH HOH . F 3 HOH B 42 172 92 HOH HOH . F 3 HOH B 43 173 93 HOH HOH . F 3 HOH B 44 174 94 HOH HOH . F 3 HOH B 45 175 95 HOH HOH . F 3 HOH B 46 176 96 HOH HOH . F 3 HOH B 47 177 97 HOH HOH . F 3 HOH B 48 178 98 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 T33 . . . C 2 20.944 42.443 4.306 0.5 28.65 ? C1 T33 130 A 1 HETATM 2 C C2 T33 . . . C 2 20.303 43.552 4.897 0.5 28.47 ? C2 T33 130 A 1 HETATM 3 C C3 T33 . . . C 2 20.826 44.297 5.915 0.5 27.99 ? C3 T33 130 A 1 HETATM 4 I I3 T33 . . . C 2 19.618 45.831 6.591 0.5 27.78 ? I3 T33 130 A 1 HETATM 5 C C4 T33 . . . C 2 22.1 43.976 6.492 0.5 27.01 ? C4 T33 130 A 1 HETATM 6 O O4 T33 . . . C 2 22.499 44.817 7.529 0.5 23.13 ? O4 T33 130 A 1 HETATM 7 C C5 T33 . . . C 2 22.754 42.893 5.901 0.5 27.84 ? C5 T33 130 A 1 HETATM 8 C C6 T33 . . . C 2 22.196 42.165 4.877 0.5 28.95 ? C6 T33 130 A 1 HETATM 9 C C7 T33 . . . C 2 20.185 41.741 3.276 0.5 28.38 ? C7 T33 130 A 1 HETATM 10 C C8 T33 . . . C 2 20.457 41.567 1.799 0.5 30.57 ? C8 T33 130 A 1 HETATM 11 N N8 T33 . . . C 2 21.371 42.555 1.234 0.5 31.16 ? N8 T33 130 A 1 HETATM 12 C C9 T33 . . . C 2 19.095 41.429 1.116 0.5 32.07 ? C9 T33 130 A 1 HETATM 13 O O9 T33 . . . C 2 18.638 42.183 0.256 0.5 33.47 ? O9 T33 130 A 1 HETATM 14 O O10 T33 . . . C 2 18.353 40.476 1.464 0.5 33.65 ? O10 T33 130 A 1 HETATM 15 C C1' T33 . . . C 2 22.293 44.609 8.954 0.5 21.34 ? C1' T33 130 A 1 HETATM 16 C C2' T33 . . . C 2 22.038 43.275 9.118 0.5 19.95 ? C2' T33 130 A 1 HETATM 17 C C3' T33 . . . C 2 21.81 42.651 10.326 0.5 19.5 ? C3' T33 130 A 1 HETATM 18 I I3' T33 . . . C 2 21.357 40.519 10.648 0.5 19.21 ? I3' T33 130 A 1 HETATM 19 C C4' T33 . . . C 2 21.858 43.647 11.35 0.5 17.57 ? C4' T33 130 A 1 HETATM 20 O O4' T33 . . . C 2 21.643 43.188 12.63 0.5 18.38 ? O4' T33 130 A 1 HETATM 21 C C5' T33 . . . C 2 22.144 45.042 11.16 0.5 17.68 ? C5' T33 130 A 1 HETATM 22 C C6' T33 . . . C 2 22.394 45.675 9.991 0.5 9.47 ? C6' T33 130 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 22 #