data_1THL # _model_server_result.job_id oBqOFR0dGIA5H6JNldFCcg _model_server_result.datetime_utc '2024-10-16 10:41:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1thl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":3231}' # _entry.id 1THL # _exptl.entry_id 1THL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1THL _cell.length_a 94.1 _cell.length_b 94.1 _cell.length_c 131.4 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1THL _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 57 A ASP 57 1_555 D CA CA . A CA 3233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc2 A OD2 ASP 57 A ASP 57 1_555 D CA CA . A CA 3233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc3 A OD1 ASP 59 A ASP 59 1_555 D CA CA . A CA 3233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc4 A O GLN 61 A GLN 61 1_555 D CA CA . A CA 3233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc5 A OD2 ASP 138 A ASP 138 1_555 B CA CA . A CA 3231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc6 A NE2 HIS 142 A HIS 142 1_555 F ZN ZN . A ZN 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc7 A NE2 HIS 146 A HIS 146 1_555 F ZN ZN . A ZN 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc8 A OE2 GLU 166 A GLU 166 1_555 F ZN ZN . A ZN 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc9 A OE2 GLU 177 A GLU 177 1_555 B CA CA . A CA 3231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.83 ? metalc ? metalc10 A OE1 GLU 177 A GLU 177 1_555 B CA CA . A CA 3231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? metalc ? metalc11 A OE2 GLU 177 A GLU 177 1_555 C CA CA . A CA 3232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc12 A O ASN 183 A ASN 183 1_555 C CA CA . A CA 3232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc13 A OD1 ASP 185 A ASP 185 1_555 B CA CA . A CA 3231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc14 A OD2 ASP 185 A ASP 185 1_555 C CA CA . A CA 3232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc15 A O GLU 187 A GLU 187 1_555 B CA CA . A CA 3231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc16 A OE1 GLU 190 A GLU 190 1_555 B CA CA . A CA 3231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc17 A OE2 GLU 190 A GLU 190 1_555 B CA CA . A CA 3231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc18 A OE2 GLU 190 A GLU 190 1_555 C CA CA . A CA 3232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc19 A O TYR 193 A TYR 193 1_555 E CA CA . A CA 3234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc20 A OG1 THR 194 A THR 194 1_555 E CA CA . A CA 3234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc21 A O THR 194 A THR 194 1_555 E CA CA . A CA 3234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc22 A O ILE 197 A ILE 197 1_555 E CA CA . A CA 3234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc23 A OD1 ASP 200 A ASP 200 1_555 E CA CA . A CA 3234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc24 G OG2 0DB . A 0DB 320 1_555 F ZN ZN . A ZN 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc25 H O HOH . A HOH 346 1_555 B CA CA . A CA 3231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? metalc ? metalc26 H O HOH . A HOH 353 1_555 C CA CA . A CA 3232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc27 H O HOH . A HOH 354 1_555 E CA CA . A CA 3234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc28 H O HOH . A HOH 419 1_555 D CA CA . A CA 3233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc29 H O HOH . A HOH 475 1_555 C CA CA . A CA 3232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc30 H O HOH . A HOH 480 1_555 E CA CA . A CA 3234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc31 H O HOH . A HOH 482 1_555 D CA CA . A CA 3233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1THL _atom_sites.fract_transf_matrix[1][1] 0.010627 _atom_sites.fract_transf_matrix[1][2] 0.006135 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012271 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00761 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 3231 3231 CA CA . C 2 CA A 1 3232 3232 CA CA . D 2 CA A 1 3233 3233 CA CA . E 2 CA A 1 3234 3234 CA CA . F 3 ZN A 1 324 324 ZN ZN . G 4 0DB A 1 320 320 0DB CLT . H 5 HOH A 1 331 331 HOH HOH . H 5 HOH A 2 332 332 HOH HOH . H 5 HOH A 3 333 333 HOH HOH . H 5 HOH A 4 334 334 HOH HOH . H 5 HOH A 5 335 335 HOH HOH . H 5 HOH A 6 338 338 HOH HOH . H 5 HOH A 7 339 339 HOH HOH . H 5 HOH A 8 340 340 HOH HOH . H 5 HOH A 9 341 341 HOH HOH . H 5 HOH A 10 342 342 HOH HOH . H 5 HOH A 11 343 343 HOH HOH . H 5 HOH A 12 344 344 HOH HOH . H 5 HOH A 13 345 345 HOH HOH . H 5 HOH A 14 346 346 HOH HOH . H 5 HOH A 15 347 347 HOH HOH . H 5 HOH A 16 348 348 HOH HOH . H 5 HOH A 17 349 349 HOH HOH . H 5 HOH A 18 350 350 HOH HOH . H 5 HOH A 19 351 351 HOH HOH . H 5 HOH A 20 352 352 HOH HOH . H 5 HOH A 21 353 353 HOH HOH . H 5 HOH A 22 354 354 HOH HOH . H 5 HOH A 23 355 355 HOH HOH . H 5 HOH A 24 356 356 HOH HOH . H 5 HOH A 25 357 357 HOH HOH . H 5 HOH A 26 358 358 HOH HOH . H 5 HOH A 27 359 359 HOH HOH . H 5 HOH A 28 361 361 HOH HOH . H 5 HOH A 29 362 362 HOH HOH . H 5 HOH A 30 366 366 HOH HOH . H 5 HOH A 31 367 367 HOH HOH . H 5 HOH A 32 368 368 HOH HOH . H 5 HOH A 33 369 369 HOH HOH . H 5 HOH A 34 370 370 HOH HOH . H 5 HOH A 35 371 371 HOH HOH . H 5 HOH A 36 372 372 HOH HOH . H 5 HOH A 37 373 373 HOH HOH . H 5 HOH A 38 374 374 HOH HOH . H 5 HOH A 39 375 375 HOH HOH . H 5 HOH A 40 377 377 HOH HOH . H 5 HOH A 41 378 378 HOH HOH . H 5 HOH A 42 379 379 HOH HOH . H 5 HOH A 43 380 380 HOH HOH . H 5 HOH A 44 381 381 HOH HOH . H 5 HOH A 45 383 383 HOH HOH . H 5 HOH A 46 384 384 HOH HOH . H 5 HOH A 47 385 385 HOH HOH . H 5 HOH A 48 386 386 HOH HOH . H 5 HOH A 49 388 388 HOH HOH . H 5 HOH A 50 389 389 HOH HOH . H 5 HOH A 51 390 390 HOH HOH . H 5 HOH A 52 391 391 HOH HOH . H 5 HOH A 53 393 393 HOH HOH . H 5 HOH A 54 395 395 HOH HOH . H 5 HOH A 55 396 396 HOH HOH . H 5 HOH A 56 397 397 HOH HOH . H 5 HOH A 57 398 398 HOH HOH . H 5 HOH A 58 403 403 HOH HOH . H 5 HOH A 59 404 404 HOH HOH . H 5 HOH A 60 405 405 HOH HOH . H 5 HOH A 61 407 407 HOH HOH . H 5 HOH A 62 408 408 HOH HOH . H 5 HOH A 63 409 409 HOH HOH . H 5 HOH A 64 410 410 HOH HOH . H 5 HOH A 65 411 411 HOH HOH . H 5 HOH A 66 412 412 HOH HOH . H 5 HOH A 67 413 413 HOH HOH . H 5 HOH A 68 414 414 HOH HOH . H 5 HOH A 69 415 415 HOH HOH . H 5 HOH A 70 416 416 HOH HOH . H 5 HOH A 71 418 418 HOH HOH . H 5 HOH A 72 419 419 HOH HOH . H 5 HOH A 73 420 420 HOH HOH . H 5 HOH A 74 422 422 HOH HOH . H 5 HOH A 75 423 423 HOH HOH . H 5 HOH A 76 424 424 HOH HOH . H 5 HOH A 77 425 425 HOH HOH . H 5 HOH A 78 426 426 HOH HOH . H 5 HOH A 79 427 427 HOH HOH . H 5 HOH A 80 428 428 HOH HOH . H 5 HOH A 81 429 429 HOH HOH . H 5 HOH A 82 430 430 HOH HOH . H 5 HOH A 83 431 431 HOH HOH . H 5 HOH A 84 432 432 HOH HOH . H 5 HOH A 85 434 434 HOH HOH . H 5 HOH A 86 436 436 HOH HOH . H 5 HOH A 87 438 438 HOH HOH . H 5 HOH A 88 439 439 HOH HOH . H 5 HOH A 89 441 441 HOH HOH . H 5 HOH A 90 444 444 HOH HOH . H 5 HOH A 91 445 445 HOH HOH . H 5 HOH A 92 446 446 HOH HOH . H 5 HOH A 93 448 448 HOH HOH . H 5 HOH A 94 449 449 HOH HOH . H 5 HOH A 95 450 450 HOH HOH . H 5 HOH A 96 452 452 HOH HOH . H 5 HOH A 97 454 454 HOH HOH . H 5 HOH A 98 455 455 HOH HOH . H 5 HOH A 99 457 457 HOH HOH . H 5 HOH A 100 458 458 HOH HOH . H 5 HOH A 101 459 459 HOH HOH . H 5 HOH A 102 461 461 HOH HOH . H 5 HOH A 103 462 462 HOH HOH . H 5 HOH A 104 463 463 HOH HOH . H 5 HOH A 105 464 464 HOH HOH . H 5 HOH A 106 465 465 HOH HOH . H 5 HOH A 107 466 466 HOH HOH . H 5 HOH A 108 467 467 HOH HOH . H 5 HOH A 109 468 468 HOH HOH . H 5 HOH A 110 469 469 HOH HOH . H 5 HOH A 111 470 470 HOH HOH . H 5 HOH A 112 471 471 HOH HOH . H 5 HOH A 113 472 472 HOH HOH . H 5 HOH A 114 473 473 HOH HOH . H 5 HOH A 115 474 474 HOH HOH . H 5 HOH A 116 475 475 HOH HOH . H 5 HOH A 117 476 476 HOH HOH . H 5 HOH A 118 477 477 HOH HOH . H 5 HOH A 119 478 478 HOH HOH . H 5 HOH A 120 479 479 HOH HOH . H 5 HOH A 121 480 480 HOH HOH . H 5 HOH A 122 481 481 HOH HOH . H 5 HOH A 123 482 482 HOH HOH . H 5 HOH A 124 483 483 HOH HOH . H 5 HOH A 125 484 484 HOH HOH . H 5 HOH A 126 485 485 HOH HOH . H 5 HOH A 127 486 486 HOH HOH . H 5 HOH A 128 487 487 HOH HOH . H 5 HOH A 129 488 488 HOH HOH . H 5 HOH A 130 489 489 HOH HOH . H 5 HOH A 131 490 490 HOH HOH . H 5 HOH A 132 491 491 HOH HOH . H 5 HOH A 133 493 493 HOH HOH . H 5 HOH A 134 494 494 HOH HOH . H 5 HOH A 135 495 495 HOH HOH . H 5 HOH A 136 496 496 HOH HOH . H 5 HOH A 137 500 500 HOH HOH . H 5 HOH A 138 501 501 HOH HOH . H 5 HOH A 139 502 502 HOH HOH . H 5 HOH A 140 503 503 HOH HOH . H 5 HOH A 141 504 504 HOH HOH . H 5 HOH A 142 505 505 HOH HOH . H 5 HOH A 143 506 506 HOH HOH . H 5 HOH A 144 507 507 HOH HOH . H 5 HOH A 145 508 508 HOH HOH . H 5 HOH A 146 510 510 HOH HOH . H 5 HOH A 147 511 511 HOH HOH . H 5 HOH A 148 512 512 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 41.828 _atom_site.Cartn_y 49.786 _atom_site.Cartn_z 4.772 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 9.51 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 3231 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 1 #