data_1THQ # _model_server_result.job_id tHHDo-8yOpHShWFMFA3WXg _model_server_result.datetime_utc '2024-11-29 15:50:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1thq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":300}' # _entry.id 1THQ # _exptl.entry_id 1THQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-2-METHYL-2,4-PENTANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1THQ _cell.length_a 50.67 _cell.length_b 50.67 _cell.length_c 158.48 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1THQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 L N N ? 4 M N N # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id MPD _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-2-METHYL-2,4-PENTANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MPD sing 276 n n C1 H11 MPD sing 277 n n C1 H12 MPD sing 278 n n C1 H13 MPD sing 279 n n C2 O2 MPD sing 280 n n C2 CM MPD sing 281 n n C2 C3 MPD sing 282 n n O2 HO2 MPD sing 283 n n CM HM1 MPD sing 284 n n CM HM2 MPD sing 285 n n CM HM3 MPD sing 286 n n C3 C4 MPD sing 287 n n C3 H31 MPD sing 288 n n C3 H32 MPD sing 289 n n C4 O4 MPD sing 290 n n C4 C5 MPD sing 291 n n C4 H4 MPD sing 292 n n O4 HO4 MPD sing 293 n n C5 H51 MPD sing 294 n n C5 H52 MPD sing 295 n n C5 H53 MPD sing 296 n n # _atom_sites.entry_id 1THQ _atom_sites.fract_transf_matrix[1][1] 0.019736 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019736 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00631 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 400 400 ACT ACT . C 2 ACT A 1 401 401 ACT ACT . D 2 ACT A 1 402 402 ACT ACT . E 2 ACT A 1 403 403 ACT ACT . F 2 ACT A 1 404 404 ACT ACT . G 3 LDA A 1 200 200 LDA LDA . H 3 LDA A 1 201 201 LDA LDA . I 3 LDA A 1 202 202 LDA LDA . J 3 LDA A 1 203 203 LDA LDA . K 3 LDA A 1 204 204 LDA LDA . L 4 MPD A 1 300 300 MPD MPD . M 4 MPD A 1 301 301 MPD MPD . N 5 HOH A 1 500 500 HOH HOH . N 5 HOH A 2 501 501 HOH HOH . N 5 HOH A 3 502 502 HOH HOH . N 5 HOH A 4 503 503 HOH HOH . N 5 HOH A 5 504 504 HOH HOH . N 5 HOH A 6 505 505 HOH HOH . N 5 HOH A 7 506 506 HOH HOH . N 5 HOH A 8 507 507 HOH HOH . N 5 HOH A 9 508 508 HOH HOH . N 5 HOH A 10 509 509 HOH HOH . N 5 HOH A 11 510 510 HOH HOH . N 5 HOH A 12 511 511 HOH HOH . N 5 HOH A 13 512 512 HOH HOH . N 5 HOH A 14 513 513 HOH HOH . N 5 HOH A 15 514 514 HOH HOH . N 5 HOH A 16 515 515 HOH HOH . N 5 HOH A 17 516 516 HOH HOH . N 5 HOH A 18 517 517 HOH HOH . N 5 HOH A 19 518 518 HOH HOH . N 5 HOH A 20 519 519 HOH HOH . N 5 HOH A 21 520 520 HOH HOH . N 5 HOH A 22 521 521 HOH HOH . N 5 HOH A 23 522 522 HOH HOH . N 5 HOH A 24 523 523 HOH HOH . N 5 HOH A 25 524 524 HOH HOH . N 5 HOH A 26 525 525 HOH HOH . N 5 HOH A 27 526 526 HOH HOH . N 5 HOH A 28 527 527 HOH HOH . N 5 HOH A 29 528 528 HOH HOH . N 5 HOH A 30 529 529 HOH HOH . N 5 HOH A 31 530 530 HOH HOH . N 5 HOH A 32 531 531 HOH HOH . N 5 HOH A 33 532 532 HOH HOH . N 5 HOH A 34 533 533 HOH HOH . N 5 HOH A 35 534 534 HOH HOH . N 5 HOH A 36 535 535 HOH HOH . N 5 HOH A 37 536 536 HOH HOH . N 5 HOH A 38 537 537 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MPD . . . L 4 -0.878 43.469 -6.481 1 36.51 ? C1 MPD 300 A 1 HETATM 2 C C2 MPD . . . L 4 -0.718 43.396 -8.026 1 35.19 ? C2 MPD 300 A 1 HETATM 3 O O2 MPD . . . L 4 -0.177 44.692 -8.498 1 38.31 ? O2 MPD 300 A 1 HETATM 4 C CM MPD . . . L 4 0.345 42.344 -8.399 1 34.26 ? CM MPD 300 A 1 HETATM 5 C C3 MPD . . . L 4 -2.121 43.08 -8.701 1 34 ? C3 MPD 300 A 1 HETATM 6 C C4 MPD . . . L 4 -3.164 44.121 -8.22 1 33.79 ? C4 MPD 300 A 1 HETATM 7 O O4 MPD . . . L 4 -2.827 45.4 -8.869 1 38.91 ? O4 MPD 300 A 1 HETATM 8 C C5 MPD . . . L 4 -4.592 43.659 -8.64 1 34.9 ? C5 MPD 300 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #