data_1TKW # _model_server_result.job_id Ej14eAG2yP0fQQiRcNnT4Q _model_server_result.datetime_utc '2024-11-11 16:19:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tkw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":253}' # _entry.id 1TKW # _exptl.entry_id 1TKW _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 618.503 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1TKW _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TKW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B SG CYS 21 B CYS 21 1_555 D CAB HEC . B HEC 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale2 B SG CYS 24 B CYS 24 1_555 D CAC HEC . B HEC 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.736 ? metalc ? metalc1 A ND1 HIS 37 A HIS 37 1_555 C CU CU . A CU 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc2 A SG CYS 84 A CYS 84 1_555 C CU CU . A CU 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc3 A ND1 HIS 87 A HIS 87 1_555 C CU CU . A CU 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc4 B N TYR 1 B TYR 1 1_555 D FE HEC . B HEC 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc5 B NE2 HIS 25 B HIS 25 1_555 D FE HEC . B HEC 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1TKW _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CU A 1 100 100 CU CU . D 4 HEC B 1 253 251 HEC HEC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . D 4 89.097 81.76 -6.091 1 0 ? FE HEC 253 B 1 HETATM 2 C CHA HEC . . . D 4 88.594 84.168 -8.463 1 0 ? CHA HEC 253 B 1 HETATM 3 C CHB HEC . . . D 4 85.783 81.692 -5.439 1 0 ? CHB HEC 253 B 1 HETATM 4 C CHC HEC . . . D 4 89.595 79.07 -4.026 1 0 ? CHC HEC 253 B 1 HETATM 5 C CHD HEC . . . D 4 92.448 82.162 -6.375 1 0 ? CHD HEC 253 B 1 HETATM 6 N NA HEC . . . D 4 87.535 82.697 -6.804 1 0 ? NA HEC 253 B 1 HETATM 7 C C1A HEC . . . D 4 87.466 83.633 -7.824 1 0 ? C1A HEC 253 B 1 HETATM 8 C C2A HEC . . . D 4 86.098 84 -8.101 1 0 ? C2A HEC 253 B 1 HETATM 9 C C3A HEC . . . D 4 85.33 83.355 -7.253 1 0 ? C3A HEC 253 B 1 HETATM 10 C C4A HEC . . . D 4 86.215 82.54 -6.435 1 0 ? C4A HEC 253 B 1 HETATM 11 C CMA HEC . . . D 4 83.799 83.343 -7.244 1 0 ? CMA HEC 253 B 1 HETATM 12 C CAA HEC . . . D 4 85.634 84.923 -9.23 1 0 ? CAA HEC 253 B 1 HETATM 13 C CBA HEC . . . D 4 85.765 86.385 -8.837 1 0 ? CBA HEC 253 B 1 HETATM 14 C CGA HEC . . . D 4 85.254 87.391 -9.859 1 0 ? CGA HEC 253 B 1 HETATM 15 O O1A HEC . . . D 4 84.787 88.426 -9.439 1 0 ? O1A HEC 253 B 1 HETATM 16 O O2A HEC . . . D 4 85.332 87.149 -11.057 1 0 ? O2A HEC 253 B 1 HETATM 17 N NB HEC . . . D 4 87.952 80.616 -4.967 1 0 ? NB HEC 253 B 1 HETATM 18 C C1B HEC . . . D 4 86.596 80.762 -4.733 1 0 ? C1B HEC 253 B 1 HETATM 19 C C2B HEC . . . D 4 86.112 79.788 -3.724 1 0 ? C2B HEC 253 B 1 HETATM 20 C C3B HEC . . . D 4 87.201 79.003 -3.393 1 0 ? C3B HEC 253 B 1 HETATM 21 C C4B HEC . . . D 4 88.315 79.529 -4.168 1 0 ? C4B HEC 253 B 1 HETATM 22 C CMB HEC . . . D 4 84.714 79.845 -3.076 1 0 ? CMB HEC 253 B 1 HETATM 23 C CAB HEC . . . D 4 87.34 77.939 -2.434 1 0 ? CAB HEC 253 B 1 HETATM 24 C CBB HEC . . . D 4 86.697 76.688 -2.886 1 0 ? CBB HEC 253 B 1 HETATM 25 N NC HEC . . . D 4 90.678 80.79 -5.36 1 0 ? NC HEC 253 B 1 HETATM 26 C C1C HEC . . . D 4 90.732 79.66 -4.555 1 0 ? C1C HEC 253 B 1 HETATM 27 C C2C HEC . . . D 4 92.103 79.219 -4.287 1 0 ? C2C HEC 253 B 1 HETATM 28 C C3C HEC . . . D 4 92.94 80.118 -4.908 1 0 ? C3C HEC 253 B 1 HETATM 29 C C4C HEC . . . D 4 92.018 81.093 -5.558 1 0 ? C4C HEC 253 B 1 HETATM 30 C CMC HEC . . . D 4 92.505 78.038 -3.421 1 0 ? CMC HEC 253 B 1 HETATM 31 C CAC HEC . . . D 4 94.394 80.132 -4.945 1 0 ? CAC HEC 253 B 1 HETATM 32 C CBC HEC . . . D 4 95.012 78.892 -5.47 1 0 ? CBC HEC 253 B 1 HETATM 33 N ND HEC . . . D 4 90.261 82.915 -7.2 1 0 ? ND HEC 253 B 1 HETATM 34 C C1D HEC . . . D 4 91.639 83.012 -7.138 1 0 ? C1D HEC 253 B 1 HETATM 35 C C2D HEC . . . D 4 92.165 83.994 -8.09 1 0 ? C2D HEC 253 B 1 HETATM 36 C C3D HEC . . . D 4 91.071 84.47 -8.725 1 0 ? C3D HEC 253 B 1 HETATM 37 C C4D HEC . . . D 4 89.904 83.819 -8.167 1 0 ? C4D HEC 253 B 1 HETATM 38 C CMD HEC . . . D 4 93.625 84.462 -8.345 1 0 ? CMD HEC 253 B 1 HETATM 39 C CAD HEC . . . D 4 91.083 85.537 -9.798 1 0 ? CAD HEC 253 B 1 HETATM 40 C CBD HEC . . . D 4 91.064 84.986 -11.187 1 0 ? CBD HEC 253 B 1 HETATM 41 C CGD HEC . . . D 4 91.032 86.135 -12.158 1 0 ? CGD HEC 253 B 1 HETATM 42 O O1D HEC . . . D 4 92.006 86.407 -12.821 1 0 ? O1D HEC 253 B 1 HETATM 43 O O2D HEC . . . D 4 90.036 86.833 -12.212 1 0 ? O2D HEC 253 B 1 HETATM 44 H HHA HEC . . . D 4 88.428 84.898 -9.259 1 0 ? HHA HEC 253 B 1 HETATM 45 H HHB HEC . . . D 4 84.728 81.777 -5.165 1 0 ? HHB HEC 253 B 1 HETATM 46 H HHC HEC . . . D 4 89.72 78.147 -3.465 1 0 ? HHC HEC 253 B 1 HETATM 47 H HHD HEC . . . D 4 93.486 82.389 -6.349 1 0 ? HHD HEC 253 B 1 HETATM 48 H HMA1 HEC . . . D 4 83.497 83.987 -8.029 1 0 ? HMA1 HEC 253 B 1 HETATM 49 H HMA2 HEC . . . D 4 83.434 82.332 -7.416 1 0 ? HMA2 HEC 253 B 1 HETATM 50 H HMA3 HEC . . . D 4 83.4 83.713 -6.299 1 0 ? HMA3 HEC 253 B 1 HETATM 51 H HAA1 HEC . . . D 4 84.611 84.701 -9.458 1 0 ? HAA1 HEC 253 B 1 HETATM 52 H HAA2 HEC . . . D 4 86.24 84.732 -10.116 1 0 ? HAA2 HEC 253 B 1 HETATM 53 H HBA1 HEC . . . D 4 86.811 86.591 -8.628 1 0 ? HBA1 HEC 253 B 1 HETATM 54 H HBA2 HEC . . . D 4 85.207 86.526 -7.936 1 0 ? HBA2 HEC 253 B 1 HETATM 55 H HMB1 HEC . . . D 4 84.696 80.715 -2.453 1 0 ? HMB1 HEC 253 B 1 HETATM 56 H HMB2 HEC . . . D 4 83.943 79.942 -3.845 1 0 ? HMB2 HEC 253 B 1 HETATM 57 H HMB3 HEC . . . D 4 84.494 78.947 -2.492 1 0 ? HMB3 HEC 253 B 1 HETATM 58 H HAB HEC . . . D 4 88.41 77.47 -2.322 1 0 ? HAB HEC 253 B 1 HETATM 59 H HBB1 HEC . . . D 4 86.026 76.442 -2.118 1 0 ? HBB1 HEC 253 B 1 HETATM 60 H HBB2 HEC . . . D 4 86.147 76.83 -3.824 1 0 ? HBB2 HEC 253 B 1 HETATM 61 H HBB3 HEC . . . D 4 87.418 75.89 -2.977 1 0 ? HBB3 HEC 253 B 1 HETATM 62 H HMC1 HEC . . . D 4 92.183 78.261 -2.447 1 0 ? HMC1 HEC 253 B 1 HETATM 63 H HMC2 HEC . . . D 4 92.058 77.118 -3.771 1 0 ? HMC2 HEC 253 B 1 HETATM 64 H HMC3 HEC . . . D 4 93.596 77.934 -3.409 1 0 ? HMC3 HEC 253 B 1 HETATM 65 H HAC HEC . . . D 4 94.895 80.863 -5.688 1 0 ? HAC HEC 253 B 1 HETATM 66 H HBC1 HEC . . . D 4 94.68 78.082 -4.878 1 0 ? HBC1 HEC 253 B 1 HETATM 67 H HBC2 HEC . . . D 4 94.76 78.713 -6.53 1 0 ? HBC2 HEC 253 B 1 HETATM 68 H HBC3 HEC . . . D 4 96.1 78.946 -5.369 1 0 ? HBC3 HEC 253 B 1 HETATM 69 H HMD1 HEC . . . D 4 94.025 83.799 -9.091 1 0 ? HMD1 HEC 253 B 1 HETATM 70 H HMD2 HEC . . . D 4 93.636 85.482 -8.73 1 0 ? HMD2 HEC 253 B 1 HETATM 71 H HMD3 HEC . . . D 4 94.214 84.433 -7.428 1 0 ? HMD3 HEC 253 B 1 HETATM 72 H HAD1 HEC . . . D 4 91.974 86.123 -9.677 1 0 ? HAD1 HEC 253 B 1 HETATM 73 H HAD2 HEC . . . D 4 90.231 86.194 -9.67 1 0 ? HAD2 HEC 253 B 1 HETATM 74 H HBD1 HEC . . . D 4 90.198 84.347 -11.329 1 0 ? HBD1 HEC 253 B 1 HETATM 75 H HBD2 HEC . . . D 4 91.955 84.416 -11.346 1 0 ? HBD2 HEC 253 B 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 181 _model_server_stats.query_time_ms 2621 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 75 #