data_1TLF # _model_server_result.job_id ga64KCfiPdcCu0v4vHA3Nw _model_server_result.datetime_utc '2025-01-28 06:19:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tlf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":998}' # _entry.id 1TLF # _exptl.entry_id 1TLF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.301 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-methylethyl 1-thio-beta-D-galactopyranoside' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.75 _cell.angle_gamma 90 _cell.entry_id 1TLF _cell.length_a 90.16 _cell.length_b 64.73 _cell.length_c 117.94 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TLF _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C9 H18 O5 S' _chem_comp.formula_weight 238.301 _chem_comp.id IPT _chem_comp.mon_nstd_flag . _chem_comp.name '1-methylethyl 1-thio-beta-D-galactopyranoside' _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms 'ISOPROPYL-1-BETA-D-THIOGALACTOSIDE;1-(ISOPROPYLTHIO)-BETA-GALACTOPYRANSIDE;1-methylethyl 1-thio-beta-D-galactoside;1-methylethyl 1-thio-D-galactoside;1-methylethyl 1-thio-galactoside' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IPT sing 178 n n C1 O5 IPT sing 179 n n C1 S1 IPT sing 180 n n C1 H1 IPT sing 181 n n C2 O2 IPT sing 182 n n C2 C3 IPT sing 183 n n C2 H2 IPT sing 184 n n O2 HO2 IPT sing 185 n n C3 O3 IPT sing 186 n n C3 C4 IPT sing 187 n n C3 H3 IPT sing 188 n n O3 HO3 IPT sing 189 n n C4 O4 IPT sing 190 n n C4 C5 IPT sing 191 n n C4 H4 IPT sing 192 n n O4 HO4 IPT sing 193 n n C5 O5 IPT sing 194 n n C5 C6 IPT sing 195 n n C5 H5 IPT sing 196 n n C6 O6 IPT sing 197 n n C6 H61 IPT sing 198 n n C6 H62 IPT sing 199 n n O6 HO6 IPT sing 200 n n S1 C1' IPT sing 201 n n C1' C2' IPT sing 202 n n C1' C3' IPT sing 203 n n C1' H1' IPT sing 204 n n C2' "H2'1" IPT sing 205 n n C2' "H2'2" IPT sing 206 n n C2' "H2'3" IPT sing 207 n n C3' "H3'1" IPT sing 208 n n C3' "H3'2" IPT sing 209 n n C3' "H3'3" IPT sing 210 n n # _pdbx_chem_comp_identifier.comp_id IPT _pdbx_chem_comp_identifier.identifier isopropyl-1-b-D-thiogalactoside _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 1TLF _atom_sites.fract_transf_matrix[1][1] 0.011091 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000339 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015449 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008483 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 EMC A 1 999 999 EMC EMC . F 3 IPT A 1 998 998 IPT IPT . G 2 EMC B 1 999 999 EMC EMC . H 3 IPT B 1 998 998 IPT IPT . I 2 EMC C 1 999 999 EMC EMC . J 3 IPT C 1 998 998 IPT IPT . K 2 EMC D 1 999 999 EMC EMC . L 3 IPT D 1 998 998 IPT IPT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IPT . . . H 3 23.023 46.189 51.094 1 23.66 ? C1 IPT 998 B 1 HETATM 2 C C2 IPT . . . H 3 24.145 46.26 50.102 1 23.66 ? C2 IPT 998 B 1 HETATM 3 O O2 IPT . . . H 3 24.445 47.61 49.858 1 23.66 ? O2 IPT 998 B 1 HETATM 4 C C3 IPT . . . H 3 23.756 45.627 48.792 1 23.66 ? C3 IPT 998 B 1 HETATM 5 O O3 IPT . . . H 3 24.901 45.555 47.963 1 23.66 ? O3 IPT 998 B 1 HETATM 6 C C4 IPT . . . H 3 23.16 44.237 48.994 1 23.66 ? C4 IPT 998 B 1 HETATM 7 O O4 IPT . . . H 3 24.156 43.329 49.431 1 23.66 ? O4 IPT 998 B 1 HETATM 8 C C5 IPT . . . H 3 22.056 44.324 50.015 1 23.66 ? C5 IPT 998 B 1 HETATM 9 O O5 IPT . . . H 3 22.587 44.845 51.236 1 23.66 ? O5 IPT 998 B 1 HETATM 10 C C6 IPT . . . H 3 21.439 43.001 50.336 1 23.66 ? C6 IPT 998 B 1 HETATM 11 O O6 IPT . . . H 3 20.442 43.153 51.338 1 23.66 ? O6 IPT 998 B 1 HETATM 12 S S1 IPT . . . H 3 23.625 46.699 52.638 1 23.66 ? S1 IPT 998 B 1 HETATM 13 C C1' IPT . . . H 3 22.122 46.978 53.493 1 23.66 ? C1' IPT 998 B 1 HETATM 14 C C2' IPT . . . H 3 22.317 46.68 54.947 1 23.66 ? C2' IPT 998 B 1 HETATM 15 C C3' IPT . . . H 3 21.632 48.389 53.294 1 23.66 ? C3' IPT 998 B 1 HETATM 16 H H1 IPT . . . H 3 22.185 46.83 50.76 1 0 ? H1 IPT 998 B 1 HETATM 17 H H2 IPT . . . H 3 25.026 45.763 50.511 1 0 ? H2 IPT 998 B 1 HETATM 18 H HO2 IPT . . . H 3 24.829 48.021 50.648 1 0 ? HO2 IPT 998 B 1 HETATM 19 H H3 IPT . . . H 3 23.019 46.288 48.323 1 0 ? H3 IPT 998 B 1 HETATM 20 H HO3 IPT . . . H 3 25.235 46.473 47.994 1 0 ? HO3 IPT 998 B 1 HETATM 21 H H4 IPT . . . H 3 22.802 43.867 48.037 1 0 ? H4 IPT 998 B 1 HETATM 22 H HO4 IPT . . . H 3 24.881 43.485 48.811 1 0 ? HO4 IPT 998 B 1 HETATM 23 H H5 IPT . . . H 3 21.245 44.976 49.651 1 0 ? H5 IPT 998 B 1 HETATM 24 H H61 IPT . . . H 3 22.212 42.308 50.687 1 0 ? H61 IPT 998 B 1 HETATM 25 H H62 IPT . . . H 3 21.011 42.532 49.44 1 0 ? H62 IPT 998 B 1 HETATM 26 H HO6 IPT . . . H 3 20.627 42.515 52.046 1 0 ? HO6 IPT 998 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 26 #