data_1TMN # _model_server_result.job_id jqr-0qy0yi0H9X8hE0Zn_A _model_server_result.datetime_utc '2024-11-05 22:34:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tmn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":318}' # _entry.id 1TMN # _exptl.entry_id 1TMN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1TMN _cell.length_a 94.2 _cell.length_b 94.2 _cell.length_c 131.4 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TMN _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 57 E ASP 57 1_555 E CA CA . E CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc2 A OD2 ASP 57 E ASP 57 1_555 E CA CA . E CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc3 A OD1 ASP 59 E ASP 59 1_555 E CA CA . E CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc4 A O GLN 61 E GLN 61 1_555 E CA CA . E CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc5 A OD1 ASP 138 E ASP 138 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc6 A NE2 HIS 142 E HIS 142 1_555 G ZN ZN . E ZN 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? metalc ? metalc7 A NE2 HIS 146 E HIS 146 1_555 G ZN ZN . E ZN 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc8 A OE1 GLU 166 E GLU 166 1_555 G ZN ZN . E ZN 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc9 A OE2 GLU 177 E GLU 177 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.996 ? metalc ? metalc10 A OE1 GLU 177 E GLU 177 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.671 ? metalc ? metalc11 A OE2 GLU 177 E GLU 177 1_555 D CA CA . E CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc12 A O ASN 183 E ASN 183 1_555 D CA CA . E CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc13 A OD1 ASP 185 E ASP 185 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.719 ? metalc ? metalc14 A OD2 ASP 185 E ASP 185 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc15 A OD1 ASP 185 E ASP 185 1_555 D CA CA . E CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc16 A O GLU 187 E GLU 187 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc17 A OE2 GLU 190 E GLU 190 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc18 A OE1 GLU 190 E GLU 190 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc19 A OE2 GLU 190 E GLU 190 1_555 D CA CA . E CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc20 A O TYR 193 E TYR 193 1_555 F CA CA . E CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? metalc ? metalc21 A O THR 194 E THR 194 1_555 F CA CA . E CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc22 A OG1 THR 194 E THR 194 1_555 F CA CA . E CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc23 A O ILE 197 E ILE 197 1_555 F CA CA . E CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc24 A OD1 ASP 200 E ASP 200 1_555 F CA CA . E CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc25 B OG1 0ZN . E 0ZN 317 1_555 G ZN ZN . E ZN 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc26 B OG2 0ZN . E 0ZN 317 1_555 G ZN ZN . E ZN 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc27 C CA CA . E CA 318 1_555 H O HOH . E HOH 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc28 D CA CA . E CA 319 1_555 H O HOH . E HOH 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc29 D CA CA . E CA 319 1_555 H O HOH . E HOH 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc30 E CA CA . E CA 320 1_555 H O HOH . E HOH 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc31 E CA CA . E CA 320 1_555 H O HOH . E HOH 482 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc32 F CA CA . E CA 321 1_555 H O HOH . E HOH 354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1TMN _atom_sites.fract_transf_matrix[1][1] 0.010616 _atom_sites.fract_transf_matrix[1][2] 0.006129 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012258 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00761 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0ZN E 1 317 1 0ZN CLT . C 3 CA E 1 318 1 CA CA . D 3 CA E 1 319 2 CA CA . E 3 CA E 1 320 3 CA CA . F 3 CA E 1 321 4 CA CA . G 4 ZN E 1 322 5 ZN ZN . H 5 HOH E 1 331 331 HOH HOH . H 5 HOH E 2 332 332 HOH HOH . H 5 HOH E 3 333 333 HOH HOH . H 5 HOH E 4 334 334 HOH HOH . H 5 HOH E 5 335 335 HOH HOH . H 5 HOH E 6 336 336 HOH HOH . H 5 HOH E 7 337 337 HOH HOH . H 5 HOH E 8 338 338 HOH HOH . H 5 HOH E 9 339 339 HOH HOH . H 5 HOH E 10 340 340 HOH HOH . H 5 HOH E 11 341 341 HOH HOH . H 5 HOH E 12 342 342 HOH HOH . H 5 HOH E 13 343 343 HOH HOH . H 5 HOH E 14 344 344 HOH HOH . H 5 HOH E 15 345 345 HOH HOH . H 5 HOH E 16 346 346 HOH HOH . H 5 HOH E 17 347 347 HOH HOH . H 5 HOH E 18 348 348 HOH HOH . H 5 HOH E 19 349 349 HOH HOH . H 5 HOH E 20 350 350 HOH HOH . H 5 HOH E 21 351 351 HOH HOH . H 5 HOH E 22 352 352 HOH HOH . H 5 HOH E 23 353 353 HOH HOH . H 5 HOH E 24 354 354 HOH HOH . H 5 HOH E 25 355 355 HOH HOH . H 5 HOH E 26 356 356 HOH HOH . H 5 HOH E 27 357 357 HOH HOH . H 5 HOH E 28 358 358 HOH HOH . H 5 HOH E 29 359 359 HOH HOH . H 5 HOH E 30 361 361 HOH HOH . H 5 HOH E 31 362 362 HOH HOH . H 5 HOH E 32 366 366 HOH HOH . H 5 HOH E 33 367 367 HOH HOH . H 5 HOH E 34 368 368 HOH HOH . H 5 HOH E 35 369 369 HOH HOH . H 5 HOH E 36 370 370 HOH HOH . H 5 HOH E 37 371 371 HOH HOH . H 5 HOH E 38 372 372 HOH HOH . H 5 HOH E 39 373 373 HOH HOH . H 5 HOH E 40 374 374 HOH HOH . H 5 HOH E 41 375 375 HOH HOH . H 5 HOH E 42 376 376 HOH HOH . H 5 HOH E 43 377 377 HOH HOH . H 5 HOH E 44 378 378 HOH HOH . H 5 HOH E 45 379 379 HOH HOH . H 5 HOH E 46 380 380 HOH HOH . H 5 HOH E 47 381 381 HOH HOH . H 5 HOH E 48 383 383 HOH HOH . H 5 HOH E 49 384 384 HOH HOH . H 5 HOH E 50 385 385 HOH HOH . H 5 HOH E 51 386 386 HOH HOH . H 5 HOH E 52 388 388 HOH HOH . H 5 HOH E 53 389 389 HOH HOH . H 5 HOH E 54 390 390 HOH HOH . H 5 HOH E 55 391 391 HOH HOH . H 5 HOH E 56 393 393 HOH HOH . H 5 HOH E 57 395 395 HOH HOH . H 5 HOH E 58 396 396 HOH HOH . H 5 HOH E 59 397 397 HOH HOH . H 5 HOH E 60 398 398 HOH HOH . H 5 HOH E 61 403 403 HOH HOH . H 5 HOH E 62 404 404 HOH HOH . H 5 HOH E 63 405 405 HOH HOH . H 5 HOH E 64 407 407 HOH HOH . H 5 HOH E 65 408 408 HOH HOH . H 5 HOH E 66 409 409 HOH HOH . H 5 HOH E 67 410 410 HOH HOH . H 5 HOH E 68 411 411 HOH HOH . H 5 HOH E 69 412 412 HOH HOH . H 5 HOH E 70 413 413 HOH HOH . H 5 HOH E 71 414 414 HOH HOH . H 5 HOH E 72 415 415 HOH HOH . H 5 HOH E 73 416 416 HOH HOH . H 5 HOH E 74 418 418 HOH HOH . H 5 HOH E 75 419 419 HOH HOH . H 5 HOH E 76 420 420 HOH HOH . H 5 HOH E 77 422 422 HOH HOH . H 5 HOH E 78 423 423 HOH HOH . H 5 HOH E 79 424 424 HOH HOH . H 5 HOH E 80 425 425 HOH HOH . H 5 HOH E 81 426 426 HOH HOH . H 5 HOH E 82 427 427 HOH HOH . H 5 HOH E 83 428 428 HOH HOH . H 5 HOH E 84 429 429 HOH HOH . H 5 HOH E 85 430 430 HOH HOH . H 5 HOH E 86 431 431 HOH HOH . H 5 HOH E 87 432 432 HOH HOH . H 5 HOH E 88 433 433 HOH HOH . H 5 HOH E 89 434 434 HOH HOH . H 5 HOH E 90 435 435 HOH HOH . H 5 HOH E 91 436 436 HOH HOH . H 5 HOH E 92 437 437 HOH HOH . H 5 HOH E 93 438 438 HOH HOH . H 5 HOH E 94 439 439 HOH HOH . H 5 HOH E 95 441 441 HOH HOH . H 5 HOH E 96 444 444 HOH HOH . H 5 HOH E 97 445 445 HOH HOH . H 5 HOH E 98 446 446 HOH HOH . H 5 HOH E 99 448 448 HOH HOH . H 5 HOH E 100 449 449 HOH HOH . H 5 HOH E 101 450 450 HOH HOH . H 5 HOH E 102 451 451 HOH HOH . H 5 HOH E 103 452 452 HOH HOH . H 5 HOH E 104 454 454 HOH HOH . H 5 HOH E 105 455 455 HOH HOH . H 5 HOH E 106 457 457 HOH HOH . H 5 HOH E 107 458 458 HOH HOH . H 5 HOH E 108 459 459 HOH HOH . H 5 HOH E 109 461 461 HOH HOH . H 5 HOH E 110 462 462 HOH HOH . H 5 HOH E 111 463 463 HOH HOH . H 5 HOH E 112 464 464 HOH HOH . H 5 HOH E 113 465 465 HOH HOH . H 5 HOH E 114 466 466 HOH HOH . H 5 HOH E 115 467 467 HOH HOH . H 5 HOH E 116 468 468 HOH HOH . H 5 HOH E 117 469 469 HOH HOH . H 5 HOH E 118 470 470 HOH HOH . H 5 HOH E 119 471 471 HOH HOH . H 5 HOH E 120 472 472 HOH HOH . H 5 HOH E 121 473 473 HOH HOH . H 5 HOH E 122 474 474 HOH HOH . H 5 HOH E 123 475 475 HOH HOH . H 5 HOH E 124 476 476 HOH HOH . H 5 HOH E 125 477 477 HOH HOH . H 5 HOH E 126 478 478 HOH HOH . H 5 HOH E 127 479 479 HOH HOH . H 5 HOH E 128 480 480 HOH HOH . H 5 HOH E 129 481 481 HOH HOH . H 5 HOH E 130 482 482 HOH HOH . H 5 HOH E 131 483 483 HOH HOH . H 5 HOH E 132 484 484 HOH HOH . H 5 HOH E 133 485 485 HOH HOH . H 5 HOH E 134 486 486 HOH HOH . H 5 HOH E 135 487 487 HOH HOH . H 5 HOH E 136 488 488 HOH HOH . H 5 HOH E 137 489 489 HOH HOH . H 5 HOH E 138 490 490 HOH HOH . H 5 HOH E 139 491 491 HOH HOH . H 5 HOH E 140 492 492 HOH HOH . H 5 HOH E 141 493 493 HOH HOH . H 5 HOH E 142 494 494 HOH HOH . H 5 HOH E 143 495 495 HOH HOH . H 5 HOH E 144 496 496 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 42.032 _atom_site.Cartn_y 49.805 _atom_site.Cartn_z 4.786 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 318 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #