data_1TN0
#
_model_server_result.job_id            21UEsG5gviRiuW6jgNtgkQ 
_model_server_result.datetime_utc      '2024-12-26 13:39:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1tn0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    1TN0 
#
_exptl.entry_id    1TN0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              284.436 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            RETINAL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          113.74 
_cell.angle_gamma         90 
_cell.entry_id            1TN0 
_cell.length_a            45.105 
_cell.length_b            108.582 
_cell.length_c            55.821 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1TN0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 216 A LYS 216 1_555 C C15 RET . A RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? 
covale ? covale2 B NZ LYS 216 B LYS 216 1_555 D C15 RET . B RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? 
#
_chem_comp.formula           'C20 H28 O' 
_chem_comp.formula_weight    284.436 
_chem_comp.id                RET 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              RETINAL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 RET sing 243 n n 
C1 C6 RET sing 244 n n 
C1 C16 RET sing 245 n n 
C1 C17 RET sing 246 n n 
C2 C3 RET sing 247 n n 
C2 H21 RET sing 248 n n 
C2 H22 RET sing 249 n n 
C3 C4 RET sing 250 n n 
C3 H31 RET sing 251 n n 
C3 H32 RET sing 252 n n 
C4 C5 RET sing 253 n n 
C4 H41 RET sing 254 n n 
C4 H42 RET sing 255 n n 
C5 C6 RET doub 256 n n 
C5 C18 RET sing 257 n n 
C6 C7 RET sing 258 n n 
C7 C8 RET doub 259 e n 
C7 H7 RET sing 260 n n 
C8 C9 RET sing 261 n n 
C8 H8 RET sing 262 n n 
C9 C10 RET doub 263 e n 
C9 C19 RET sing 264 n n 
C10 C11 RET sing 265 n n 
C10 H10 RET sing 266 n n 
C11 C12 RET doub 267 e n 
C11 H11 RET sing 268 n n 
C12 C13 RET sing 269 n n 
C12 H12 RET sing 270 n n 
C13 C14 RET doub 271 e n 
C13 C20 RET sing 272 n n 
C14 C15 RET sing 273 n n 
C14 H14 RET sing 274 n n 
C15 O1 RET doub 275 n n 
C15 H15 RET sing 276 n n 
C16 H161 RET sing 277 n n 
C16 H162 RET sing 278 n n 
C16 H163 RET sing 279 n n 
C17 H171 RET sing 280 n n 
C17 H172 RET sing 281 n n 
C17 H173 RET sing 282 n n 
C18 H181 RET sing 283 n n 
C18 H182 RET sing 284 n n 
C18 H183 RET sing 285 n n 
C19 H191 RET sing 286 n n 
C19 H192 RET sing 287 n n 
C19 H193 RET sing 288 n n 
C20 H201 RET sing 289 n n 
C20 H202 RET sing 290 n n 
C20 H203 RET sing 291 n n 
#
_atom_sites.entry_id                     1TN0 
_atom_sites.fract_transf_matrix[1][1]    0.02217 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.009751 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00921 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01957 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 RET A 1 301 301 RET RET . 
D 2 RET B 1 301 301 RET RET . 
E 3 HOH A 1 302 1 HOH HOH . 
E 3 HOH A 2 303 2 HOH HOH . 
E 3 HOH A 3 304 3 HOH HOH . 
E 3 HOH A 4 305 4 HOH HOH . 
E 3 HOH A 5 306 5 HOH HOH . 
E 3 HOH A 6 307 6 HOH HOH . 
E 3 HOH A 7 308 7 HOH HOH . 
E 3 HOH A 8 309 8 HOH HOH . 
E 3 HOH A 9 310 9 HOH HOH . 
E 3 HOH A 10 311 10 HOH HOH . 
E 3 HOH A 11 312 11 HOH HOH . 
E 3 HOH A 12 313 12 HOH HOH . 
E 3 HOH A 13 314 13 HOH HOH . 
E 3 HOH A 14 315 14 HOH HOH . 
E 3 HOH A 15 316 15 HOH HOH . 
E 3 HOH A 16 317 32 HOH HOH . 
E 3 HOH A 17 318 35 HOH HOH . 
E 3 HOH A 18 319 38 HOH HOH . 
E 3 HOH A 19 320 39 HOH HOH . 
E 3 HOH A 20 321 42 HOH HOH . 
E 3 HOH A 21 322 43 HOH HOH . 
E 3 HOH A 22 323 46 HOH HOH . 
E 3 HOH A 23 324 47 HOH HOH . 
E 3 HOH A 24 325 48 HOH HOH . 
E 3 HOH A 25 326 57 HOH HOH . 
E 3 HOH A 26 327 60 HOH HOH . 
F 3 HOH B 1 302 16 HOH HOH . 
F 3 HOH B 2 303 17 HOH HOH . 
F 3 HOH B 3 304 18 HOH HOH . 
F 3 HOH B 4 305 19 HOH HOH . 
F 3 HOH B 5 306 20 HOH HOH . 
F 3 HOH B 6 307 21 HOH HOH . 
F 3 HOH B 7 308 22 HOH HOH . 
F 3 HOH B 8 309 23 HOH HOH . 
F 3 HOH B 9 310 24 HOH HOH . 
F 3 HOH B 10 311 25 HOH HOH . 
F 3 HOH B 11 312 26 HOH HOH . 
F 3 HOH B 12 313 27 HOH HOH . 
F 3 HOH B 13 314 28 HOH HOH . 
F 3 HOH B 14 315 29 HOH HOH . 
F 3 HOH B 15 316 30 HOH HOH . 
F 3 HOH B 16 317 31 HOH HOH . 
F 3 HOH B 17 318 33 HOH HOH . 
F 3 HOH B 18 319 34 HOH HOH . 
F 3 HOH B 19 320 36 HOH HOH . 
F 3 HOH B 20 321 37 HOH HOH . 
F 3 HOH B 21 322 40 HOH HOH . 
F 3 HOH B 22 323 41 HOH HOH . 
F 3 HOH B 23 324 44 HOH HOH . 
F 3 HOH B 24 325 45 HOH HOH . 
F 3 HOH B 25 326 49 HOH HOH . 
F 3 HOH B 26 327 50 HOH HOH . 
F 3 HOH B 27 328 51 HOH HOH . 
F 3 HOH B 28 329 52 HOH HOH . 
F 3 HOH B 29 330 53 HOH HOH . 
F 3 HOH B 30 331 54 HOH HOH . 
F 3 HOH B 31 332 55 HOH HOH . 
F 3 HOH B 32 333 56 HOH HOH . 
F 3 HOH B 33 334 58 HOH HOH . 
F 3 HOH B 34 335 59 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 RET . . . C 2 41.33 54.849 2.245 1 26.21 ? C1 RET 301 A 1 
HETATM 2 C C2 RET . . . C 2 42.181 56.059 1.732 1 25.41 ? C2 RET 301 A 1 
HETATM 3 C C3 RET . . . C 2 42.771 55.995 0.364 1 25.39 ? C3 RET 301 A 1 
HETATM 4 C C4 RET . . . C 2 43.292 54.617 -0.089 1 26.14 ? C4 RET 301 A 1 
HETATM 5 C C5 RET . . . C 2 42.483 53.365 0.387 1 25.61 ? C5 RET 301 A 1 
HETATM 6 C C6 RET . . . C 2 41.57 53.47 1.466 1 25.72 ? C6 RET 301 A 1 
HETATM 7 C C7 RET . . . C 2 40.867 52.192 1.779 1 27.38 ? C7 RET 301 A 1 
HETATM 8 C C8 RET . . . C 2 39.93 51.859 2.715 1 28.51 ? C8 RET 301 A 1 
HETATM 9 C C9 RET . . . C 2 39.281 50.577 2.913 1 28.41 ? C9 RET 301 A 1 
HETATM 10 C C10 RET . . . C 2 38.396 50.611 3.961 1 27.24 ? C10 RET 301 A 1 
HETATM 11 C C11 RET . . . C 2 37.624 49.421 4.332 1 29.49 ? C11 RET 301 A 1 
HETATM 12 C C12 RET . . . C 2 36.822 49.64 5.4 1 30.24 ? C12 RET 301 A 1 
HETATM 13 C C13 RET . . . C 2 35.939 48.634 5.996 1 30.66 ? C13 RET 301 A 1 
HETATM 14 C C14 RET . . . C 2 35.287 49.196 7.067 1 30.78 ? C14 RET 301 A 1 
HETATM 15 C C15 RET . . . C 2 34.351 48.535 7.905 1 29.18 ? C15 RET 301 A 1 
HETATM 16 C C16 RET . . . C 2 41.69 54.715 3.767 1 26.98 ? C16 RET 301 A 1 
HETATM 17 C C17 RET . . . C 2 39.839 55.391 2.083 1 25.01 ? C17 RET 301 A 1 
HETATM 18 C C18 RET . . . C 2 42.87 52.193 -0.475 1 23.52 ? C18 RET 301 A 1 
HETATM 19 C C19 RET . . . C 2 39.576 49.369 2.04 1 28.23 ? C19 RET 301 A 1 
HETATM 20 C C20 RET . . . C 2 35.806 47.22 5.485 1 29.74 ? C20 RET 301 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          24 
_model_server_stats.element_count           20 
#