data_1TOJ # _model_server_result.job_id 7YYGenGkk_nM9RjDPIdaLQ _model_server_result.datetime_utc '2024-11-06 20:37:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1toj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":410}' # _entry.id 1TOJ # _exptl.entry_id 1TOJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.174 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HYDROCINNAMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1TOJ _cell.length_a 83.412 _cell.length_b 156.03 _cell.length_c 77.865 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TOJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 83.412 0 38.9325 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 245 A SER 257 1_555 A N LLP 246 A LLP 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C LLP 246 A LLP 258 1_555 A N ASN 247 A ASN 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C9 H10 O2' _chem_comp.formula_weight 150.174 _chem_comp.id HCI _chem_comp.mon_nstd_flag . _chem_comp.name 'HYDROCINNAMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '3PP;3-PHENYLPROPIONIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HCI doub 129 n n C1 O2 HCI sing 130 n n C1 C2 HCI sing 131 n n O2 HO2 HCI sing 132 n n C2 C3 HCI sing 133 n n C2 H21 HCI sing 134 n n C2 H22 HCI sing 135 n n C3 C1' HCI sing 136 n n C3 H31 HCI sing 137 n n C3 H32 HCI sing 138 n n C1' C2' HCI doub 139 n y C1' C6' HCI sing 140 n y C2' C3' HCI sing 141 n y C2' H2' HCI sing 142 n n C3' C4' HCI doub 143 n y C3' H3' HCI sing 144 n n C4' C5' HCI sing 145 n y C4' H4' HCI sing 146 n n C5' C6' HCI doub 147 n y C5' H5' HCI sing 148 n n C6' H6' HCI sing 149 n n # _atom_sites.entry_id 1TOJ _atom_sites.fract_transf_matrix[1][1] 0.011989 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006409 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012843 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HCI A 1 410 201 HCI HCI . C 3 HOH A 1 411 1 HOH HOH . C 3 HOH A 2 412 2 HOH HOH . C 3 HOH A 3 413 3 HOH HOH . C 3 HOH A 4 414 4 HOH HOH . C 3 HOH A 5 415 5 HOH HOH . C 3 HOH A 6 416 6 HOH HOH . C 3 HOH A 7 417 7 HOH HOH . C 3 HOH A 8 418 8 HOH HOH . C 3 HOH A 9 419 9 HOH HOH . C 3 HOH A 10 420 10 HOH HOH . C 3 HOH A 11 421 11 HOH HOH . C 3 HOH A 12 422 12 HOH HOH . C 3 HOH A 13 423 13 HOH HOH . C 3 HOH A 14 424 14 HOH HOH . C 3 HOH A 15 425 15 HOH HOH . C 3 HOH A 16 426 16 HOH HOH . C 3 HOH A 17 427 17 HOH HOH . C 3 HOH A 18 428 18 HOH HOH . C 3 HOH A 19 429 19 HOH HOH . C 3 HOH A 20 430 20 HOH HOH . C 3 HOH A 21 431 21 HOH HOH . C 3 HOH A 22 432 22 HOH HOH . C 3 HOH A 23 433 23 HOH HOH . C 3 HOH A 24 434 24 HOH HOH . C 3 HOH A 25 435 25 HOH HOH . C 3 HOH A 26 436 26 HOH HOH . C 3 HOH A 27 437 27 HOH HOH . C 3 HOH A 28 438 28 HOH HOH . C 3 HOH A 29 439 29 HOH HOH . C 3 HOH A 30 440 30 HOH HOH . C 3 HOH A 31 441 31 HOH HOH . C 3 HOH A 32 442 32 HOH HOH . C 3 HOH A 33 443 33 HOH HOH . C 3 HOH A 34 444 34 HOH HOH . C 3 HOH A 35 445 35 HOH HOH . C 3 HOH A 36 446 36 HOH HOH . C 3 HOH A 37 447 37 HOH HOH . C 3 HOH A 38 448 38 HOH HOH . C 3 HOH A 39 449 39 HOH HOH . C 3 HOH A 40 450 40 HOH HOH . C 3 HOH A 41 451 41 HOH HOH . C 3 HOH A 42 452 42 HOH HOH . C 3 HOH A 43 453 43 HOH HOH . C 3 HOH A 44 454 44 HOH HOH . C 3 HOH A 45 455 45 HOH HOH . C 3 HOH A 46 456 46 HOH HOH . C 3 HOH A 47 457 47 HOH HOH . C 3 HOH A 48 458 48 HOH HOH . C 3 HOH A 49 459 49 HOH HOH . C 3 HOH A 50 460 50 HOH HOH . C 3 HOH A 51 461 51 HOH HOH . C 3 HOH A 52 462 52 HOH HOH . C 3 HOH A 53 463 53 HOH HOH . C 3 HOH A 54 464 54 HOH HOH . C 3 HOH A 55 465 55 HOH HOH . C 3 HOH A 56 466 56 HOH HOH . C 3 HOH A 57 467 57 HOH HOH . C 3 HOH A 58 468 58 HOH HOH . C 3 HOH A 59 469 59 HOH HOH . C 3 HOH A 60 470 60 HOH HOH . C 3 HOH A 61 471 61 HOH HOH . C 3 HOH A 62 472 62 HOH HOH . C 3 HOH A 63 473 63 HOH HOH . C 3 HOH A 64 474 64 HOH HOH . C 3 HOH A 65 475 65 HOH HOH . C 3 HOH A 66 476 66 HOH HOH . C 3 HOH A 67 477 67 HOH HOH . C 3 HOH A 68 478 68 HOH HOH . C 3 HOH A 69 479 69 HOH HOH . C 3 HOH A 70 480 70 HOH HOH . C 3 HOH A 71 481 71 HOH HOH . C 3 HOH A 72 482 72 HOH HOH . C 3 HOH A 73 483 73 HOH HOH . C 3 HOH A 74 484 74 HOH HOH . C 3 HOH A 75 485 75 HOH HOH . C 3 HOH A 76 486 76 HOH HOH . C 3 HOH A 77 487 77 HOH HOH . C 3 HOH A 78 488 78 HOH HOH . C 3 HOH A 79 489 79 HOH HOH . C 3 HOH A 80 490 80 HOH HOH . C 3 HOH A 81 491 81 HOH HOH . C 3 HOH A 82 492 82 HOH HOH . C 3 HOH A 83 493 83 HOH HOH . C 3 HOH A 84 494 84 HOH HOH . C 3 HOH A 85 495 85 HOH HOH . C 3 HOH A 86 496 86 HOH HOH . C 3 HOH A 87 497 87 HOH HOH . C 3 HOH A 88 498 88 HOH HOH . C 3 HOH A 89 499 89 HOH HOH . C 3 HOH A 90 500 90 HOH HOH . C 3 HOH A 91 501 91 HOH HOH . C 3 HOH A 92 502 92 HOH HOH . C 3 HOH A 93 503 93 HOH HOH . C 3 HOH A 94 504 94 HOH HOH . C 3 HOH A 95 505 95 HOH HOH . C 3 HOH A 96 506 96 HOH HOH . C 3 HOH A 97 507 97 HOH HOH . C 3 HOH A 98 508 98 HOH HOH . C 3 HOH A 99 509 99 HOH HOH . C 3 HOH A 100 510 100 HOH HOH . C 3 HOH A 101 511 101 HOH HOH . C 3 HOH A 102 512 102 HOH HOH . C 3 HOH A 103 513 103 HOH HOH . C 3 HOH A 104 514 104 HOH HOH . C 3 HOH A 105 515 105 HOH HOH . C 3 HOH A 106 516 106 HOH HOH . C 3 HOH A 107 517 107 HOH HOH . C 3 HOH A 108 518 108 HOH HOH . C 3 HOH A 109 519 109 HOH HOH . C 3 HOH A 110 520 110 HOH HOH . C 3 HOH A 111 521 111 HOH HOH . C 3 HOH A 112 522 112 HOH HOH . C 3 HOH A 113 523 113 HOH HOH . C 3 HOH A 114 524 114 HOH HOH . C 3 HOH A 115 525 115 HOH HOH . C 3 HOH A 116 526 116 HOH HOH . C 3 HOH A 117 527 117 HOH HOH . C 3 HOH A 118 528 118 HOH HOH . C 3 HOH A 119 529 119 HOH HOH . C 3 HOH A 120 530 120 HOH HOH . C 3 HOH A 121 531 121 HOH HOH . C 3 HOH A 122 532 122 HOH HOH . C 3 HOH A 123 533 123 HOH HOH . C 3 HOH A 124 534 124 HOH HOH . C 3 HOH A 125 535 125 HOH HOH . C 3 HOH A 126 536 126 HOH HOH . C 3 HOH A 127 537 127 HOH HOH . C 3 HOH A 128 538 128 HOH HOH . C 3 HOH A 129 539 129 HOH HOH . C 3 HOH A 130 540 130 HOH HOH . C 3 HOH A 131 541 131 HOH HOH . C 3 HOH A 132 542 132 HOH HOH . C 3 HOH A 133 543 133 HOH HOH . C 3 HOH A 134 544 134 HOH HOH . C 3 HOH A 135 545 135 HOH HOH . C 3 HOH A 136 546 136 HOH HOH . C 3 HOH A 137 547 137 HOH HOH . C 3 HOH A 138 548 138 HOH HOH . C 3 HOH A 139 549 139 HOH HOH . C 3 HOH A 140 550 140 HOH HOH . C 3 HOH A 141 551 141 HOH HOH . C 3 HOH A 142 552 142 HOH HOH . C 3 HOH A 143 553 143 HOH HOH . C 3 HOH A 144 554 144 HOH HOH . C 3 HOH A 145 555 145 HOH HOH . C 3 HOH A 146 556 146 HOH HOH . C 3 HOH A 147 557 147 HOH HOH . C 3 HOH A 148 558 148 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HCI . . . B 2 31.241 23.696 4.735 1 17.92 ? C1 HCI 410 A 1 HETATM 2 O O1 HCI . . . B 2 30.115 23.223 4.874 1 17.98 ? O1 HCI 410 A 1 HETATM 3 O O2 HCI . . . B 2 31.386 24.883 4.158 1 19.04 ? O2 HCI 410 A 1 HETATM 4 C C2 HCI . . . B 2 32.476 22.944 5.179 1 18.51 ? C2 HCI 410 A 1 HETATM 5 C C3 HCI . . . B 2 32.359 22.402 6.61 1 17.94 ? C3 HCI 410 A 1 HETATM 6 C C1' HCI . . . B 2 32.609 23.505 7.624 1 18.88 ? C1' HCI 410 A 1 HETATM 7 C C2' HCI . . . B 2 33.83 23.564 8.314 1 19.36 ? C2' HCI 410 A 1 HETATM 8 C C3' HCI . . . B 2 34.055 24.593 9.245 1 19.87 ? C3' HCI 410 A 1 HETATM 9 C C4' HCI . . . B 2 33.078 25.566 9.464 1 18.07 ? C4' HCI 410 A 1 HETATM 10 C C5' HCI . . . B 2 31.858 25.513 8.772 1 18.29 ? C5' HCI 410 A 1 HETATM 11 C C6' HCI . . . B 2 31.628 24.487 7.857 1 19.6 ? C6' HCI 410 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #