data_1TOK # _model_server_result.job_id EPJaO4y8HN2nglW3eCXf3w _model_server_result.datetime_utc '2024-11-06 20:36:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tok # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":410}' # _entry.id 1TOK # _exptl.entry_id 1TOK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 116.072 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MALEIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1TOK _cell.length_a 140.142 _cell.length_b 140.142 _cell.length_c 81.075 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TOK _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 245 A SER 257 1_555 A N LLP 246 A LLP 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C LLP 246 A LLP 258 1_555 A N ASN 247 A ASN 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale3 B C SER 245 B SER 257 1_555 B N LLP 246 B LLP 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale4 B C LLP 246 B LLP 258 1_555 B N ASN 247 B ASN 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? # _chem_comp.formula 'C4 H4 O4' _chem_comp.formula_weight 116.072 _chem_comp.id MAE _chem_comp.mon_nstd_flag . _chem_comp.name 'MALEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MAE doub 265 n n C1 O2 MAE sing 266 n n C1 C2 MAE sing 267 n n O2 HO2 MAE sing 268 n n C2 C3 MAE doub 269 z n C2 H2 MAE sing 270 n n C3 C4 MAE sing 271 n n C3 H3 MAE sing 272 n n C4 O3 MAE doub 273 n n C4 O4 MAE sing 274 n n O4 HO4 MAE sing 275 n n # _atom_sites.entry_id 1TOK _atom_sites.fract_transf_matrix[1][1] 0.007136 _atom_sites.fract_transf_matrix[1][2] 0.00412 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00824 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012334 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MAE A 1 410 301 MAE MAE . D 2 MAE B 1 410 302 MAE MAE . E 3 HOH A 1 411 1 HOH HOH . E 3 HOH A 2 412 2 HOH HOH . E 3 HOH A 3 413 3 HOH HOH . E 3 HOH A 4 414 5 HOH HOH . E 3 HOH A 5 415 7 HOH HOH . E 3 HOH A 6 416 9 HOH HOH . E 3 HOH A 7 417 16 HOH HOH . E 3 HOH A 8 418 17 HOH HOH . E 3 HOH A 9 419 18 HOH HOH . E 3 HOH A 10 420 21 HOH HOH . E 3 HOH A 11 421 24 HOH HOH . E 3 HOH A 12 422 25 HOH HOH . E 3 HOH A 13 423 31 HOH HOH . E 3 HOH A 14 424 32 HOH HOH . E 3 HOH A 15 425 37 HOH HOH . E 3 HOH A 16 426 41 HOH HOH . E 3 HOH A 17 427 42 HOH HOH . E 3 HOH A 18 428 44 HOH HOH . E 3 HOH A 19 429 46 HOH HOH . E 3 HOH A 20 430 48 HOH HOH . E 3 HOH A 21 431 49 HOH HOH . E 3 HOH A 22 432 50 HOH HOH . E 3 HOH A 23 433 51 HOH HOH . E 3 HOH A 24 434 52 HOH HOH . E 3 HOH A 25 435 55 HOH HOH . E 3 HOH A 26 436 56 HOH HOH . E 3 HOH A 27 437 57 HOH HOH . E 3 HOH A 28 438 59 HOH HOH . E 3 HOH A 29 439 64 HOH HOH . E 3 HOH A 30 440 66 HOH HOH . E 3 HOH A 31 441 70 HOH HOH . E 3 HOH A 32 442 71 HOH HOH . E 3 HOH A 33 443 72 HOH HOH . E 3 HOH A 34 444 74 HOH HOH . E 3 HOH A 35 445 76 HOH HOH . E 3 HOH A 36 446 77 HOH HOH . E 3 HOH A 37 447 78 HOH HOH . E 3 HOH A 38 448 79 HOH HOH . E 3 HOH A 39 449 80 HOH HOH . E 3 HOH A 40 450 82 HOH HOH . E 3 HOH A 41 451 83 HOH HOH . E 3 HOH A 42 452 84 HOH HOH . E 3 HOH A 43 453 85 HOH HOH . E 3 HOH A 44 454 86 HOH HOH . E 3 HOH A 45 455 87 HOH HOH . E 3 HOH A 46 456 88 HOH HOH . E 3 HOH A 47 457 90 HOH HOH . E 3 HOH A 48 458 95 HOH HOH . E 3 HOH A 49 459 98 HOH HOH . E 3 HOH A 50 460 99 HOH HOH . E 3 HOH A 51 461 100 HOH HOH . E 3 HOH A 52 462 101 HOH HOH . E 3 HOH A 53 463 102 HOH HOH . E 3 HOH A 54 464 105 HOH HOH . E 3 HOH A 55 465 109 HOH HOH . E 3 HOH A 56 466 111 HOH HOH . E 3 HOH A 57 467 112 HOH HOH . E 3 HOH A 58 468 113 HOH HOH . E 3 HOH A 59 469 114 HOH HOH . E 3 HOH A 60 470 115 HOH HOH . E 3 HOH A 61 471 116 HOH HOH . E 3 HOH A 62 472 118 HOH HOH . E 3 HOH A 63 473 121 HOH HOH . E 3 HOH A 64 474 122 HOH HOH . E 3 HOH A 65 475 123 HOH HOH . E 3 HOH A 66 476 124 HOH HOH . E 3 HOH A 67 477 127 HOH HOH . E 3 HOH A 68 478 128 HOH HOH . E 3 HOH A 69 479 129 HOH HOH . E 3 HOH A 70 480 131 HOH HOH . E 3 HOH A 71 481 134 HOH HOH . E 3 HOH A 72 482 135 HOH HOH . E 3 HOH A 73 483 136 HOH HOH . E 3 HOH A 74 484 137 HOH HOH . E 3 HOH A 75 485 140 HOH HOH . E 3 HOH A 76 486 147 HOH HOH . E 3 HOH A 77 487 149 HOH HOH . E 3 HOH A 78 488 152 HOH HOH . E 3 HOH A 79 489 154 HOH HOH . E 3 HOH A 80 490 155 HOH HOH . E 3 HOH A 81 491 156 HOH HOH . E 3 HOH A 82 492 157 HOH HOH . E 3 HOH A 83 493 158 HOH HOH . E 3 HOH A 84 494 159 HOH HOH . E 3 HOH A 85 495 162 HOH HOH . E 3 HOH A 86 496 164 HOH HOH . E 3 HOH A 87 497 165 HOH HOH . E 3 HOH A 88 498 167 HOH HOH . E 3 HOH A 89 499 168 HOH HOH . E 3 HOH A 90 500 171 HOH HOH . E 3 HOH A 91 501 173 HOH HOH . E 3 HOH A 92 502 176 HOH HOH . E 3 HOH A 93 503 180 HOH HOH . E 3 HOH A 94 504 182 HOH HOH . E 3 HOH A 95 505 184 HOH HOH . E 3 HOH A 96 506 185 HOH HOH . E 3 HOH A 97 507 186 HOH HOH . E 3 HOH A 98 508 187 HOH HOH . E 3 HOH A 99 509 188 HOH HOH . E 3 HOH A 100 510 190 HOH HOH . E 3 HOH A 101 511 192 HOH HOH . E 3 HOH A 102 512 194 HOH HOH . E 3 HOH A 103 513 196 HOH HOH . E 3 HOH A 104 514 197 HOH HOH . E 3 HOH A 105 515 198 HOH HOH . E 3 HOH A 106 516 199 HOH HOH . E 3 HOH A 107 517 201 HOH HOH . E 3 HOH A 108 518 204 HOH HOH . E 3 HOH A 109 519 206 HOH HOH . E 3 HOH A 110 520 207 HOH HOH . E 3 HOH A 111 521 208 HOH HOH . E 3 HOH A 112 522 209 HOH HOH . E 3 HOH A 113 523 210 HOH HOH . E 3 HOH A 114 524 212 HOH HOH . E 3 HOH A 115 525 215 HOH HOH . E 3 HOH A 116 526 216 HOH HOH . E 3 HOH A 117 527 217 HOH HOH . E 3 HOH A 118 528 218 HOH HOH . E 3 HOH A 119 529 221 HOH HOH . E 3 HOH A 120 530 227 HOH HOH . E 3 HOH A 121 531 229 HOH HOH . E 3 HOH A 122 532 230 HOH HOH . E 3 HOH A 123 533 231 HOH HOH . E 3 HOH A 124 534 233 HOH HOH . E 3 HOH A 125 535 236 HOH HOH . E 3 HOH A 126 536 238 HOH HOH . E 3 HOH A 127 537 239 HOH HOH . E 3 HOH A 128 538 245 HOH HOH . E 3 HOH A 129 539 246 HOH HOH . E 3 HOH A 130 540 247 HOH HOH . E 3 HOH A 131 541 248 HOH HOH . E 3 HOH A 132 542 249 HOH HOH . E 3 HOH A 133 543 252 HOH HOH . E 3 HOH A 134 544 255 HOH HOH . E 3 HOH A 135 545 259 HOH HOH . E 3 HOH A 136 546 260 HOH HOH . E 3 HOH A 137 547 261 HOH HOH . E 3 HOH A 138 548 263 HOH HOH . E 3 HOH A 139 549 264 HOH HOH . E 3 HOH A 140 550 265 HOH HOH . E 3 HOH A 141 551 266 HOH HOH . E 3 HOH A 142 552 267 HOH HOH . E 3 HOH A 143 553 268 HOH HOH . E 3 HOH A 144 554 269 HOH HOH . E 3 HOH A 145 555 271 HOH HOH . E 3 HOH A 146 556 272 HOH HOH . E 3 HOH A 147 557 273 HOH HOH . E 3 HOH A 148 558 274 HOH HOH . E 3 HOH A 149 559 276 HOH HOH . E 3 HOH A 150 560 277 HOH HOH . E 3 HOH A 151 561 278 HOH HOH . E 3 HOH A 152 562 279 HOH HOH . E 3 HOH A 153 563 281 HOH HOH . E 3 HOH A 154 564 282 HOH HOH . F 3 HOH B 1 411 4 HOH HOH . F 3 HOH B 2 412 6 HOH HOH . F 3 HOH B 3 413 8 HOH HOH . F 3 HOH B 4 414 10 HOH HOH . F 3 HOH B 5 415 11 HOH HOH . F 3 HOH B 6 416 12 HOH HOH . F 3 HOH B 7 417 13 HOH HOH . F 3 HOH B 8 418 14 HOH HOH . F 3 HOH B 9 419 15 HOH HOH . F 3 HOH B 10 420 19 HOH HOH . F 3 HOH B 11 421 20 HOH HOH . F 3 HOH B 12 422 22 HOH HOH . F 3 HOH B 13 423 23 HOH HOH . F 3 HOH B 14 424 26 HOH HOH . F 3 HOH B 15 425 27 HOH HOH . F 3 HOH B 16 426 28 HOH HOH . F 3 HOH B 17 427 29 HOH HOH . F 3 HOH B 18 428 30 HOH HOH . F 3 HOH B 19 429 33 HOH HOH . F 3 HOH B 20 430 34 HOH HOH . F 3 HOH B 21 431 35 HOH HOH . F 3 HOH B 22 432 36 HOH HOH . F 3 HOH B 23 433 38 HOH HOH . F 3 HOH B 24 434 39 HOH HOH . F 3 HOH B 25 435 40 HOH HOH . F 3 HOH B 26 436 43 HOH HOH . F 3 HOH B 27 437 45 HOH HOH . F 3 HOH B 28 438 47 HOH HOH . F 3 HOH B 29 439 53 HOH HOH . F 3 HOH B 30 440 54 HOH HOH . F 3 HOH B 31 441 58 HOH HOH . F 3 HOH B 32 442 60 HOH HOH . F 3 HOH B 33 443 61 HOH HOH . F 3 HOH B 34 444 62 HOH HOH . F 3 HOH B 35 445 63 HOH HOH . F 3 HOH B 36 446 65 HOH HOH . F 3 HOH B 37 447 67 HOH HOH . F 3 HOH B 38 448 68 HOH HOH . F 3 HOH B 39 449 69 HOH HOH . F 3 HOH B 40 450 73 HOH HOH . F 3 HOH B 41 451 75 HOH HOH . F 3 HOH B 42 452 81 HOH HOH . F 3 HOH B 43 453 89 HOH HOH . F 3 HOH B 44 454 91 HOH HOH . F 3 HOH B 45 455 92 HOH HOH . F 3 HOH B 46 456 93 HOH HOH . F 3 HOH B 47 457 94 HOH HOH . F 3 HOH B 48 458 96 HOH HOH . F 3 HOH B 49 459 97 HOH HOH . F 3 HOH B 50 460 103 HOH HOH . F 3 HOH B 51 461 104 HOH HOH . F 3 HOH B 52 462 106 HOH HOH . F 3 HOH B 53 463 107 HOH HOH . F 3 HOH B 54 464 108 HOH HOH . F 3 HOH B 55 465 110 HOH HOH . F 3 HOH B 56 466 117 HOH HOH . F 3 HOH B 57 467 119 HOH HOH . F 3 HOH B 58 468 120 HOH HOH . F 3 HOH B 59 469 125 HOH HOH . F 3 HOH B 60 470 126 HOH HOH . F 3 HOH B 61 471 130 HOH HOH . F 3 HOH B 62 472 132 HOH HOH . F 3 HOH B 63 473 133 HOH HOH . F 3 HOH B 64 474 138 HOH HOH . F 3 HOH B 65 475 139 HOH HOH . F 3 HOH B 66 476 141 HOH HOH . F 3 HOH B 67 477 142 HOH HOH . F 3 HOH B 68 478 143 HOH HOH . F 3 HOH B 69 479 144 HOH HOH . F 3 HOH B 70 480 145 HOH HOH . F 3 HOH B 71 481 146 HOH HOH . F 3 HOH B 72 482 148 HOH HOH . F 3 HOH B 73 483 150 HOH HOH . F 3 HOH B 74 484 151 HOH HOH . F 3 HOH B 75 485 153 HOH HOH . F 3 HOH B 76 486 160 HOH HOH . F 3 HOH B 77 487 161 HOH HOH . F 3 HOH B 78 488 163 HOH HOH . F 3 HOH B 79 489 166 HOH HOH . F 3 HOH B 80 490 169 HOH HOH . F 3 HOH B 81 491 170 HOH HOH . F 3 HOH B 82 492 172 HOH HOH . F 3 HOH B 83 493 174 HOH HOH . F 3 HOH B 84 494 175 HOH HOH . F 3 HOH B 85 495 177 HOH HOH . F 3 HOH B 86 496 178 HOH HOH . F 3 HOH B 87 497 179 HOH HOH . F 3 HOH B 88 498 181 HOH HOH . F 3 HOH B 89 499 183 HOH HOH . F 3 HOH B 90 500 189 HOH HOH . F 3 HOH B 91 501 191 HOH HOH . F 3 HOH B 92 502 193 HOH HOH . F 3 HOH B 93 503 195 HOH HOH . F 3 HOH B 94 504 200 HOH HOH . F 3 HOH B 95 505 202 HOH HOH . F 3 HOH B 96 506 203 HOH HOH . F 3 HOH B 97 507 205 HOH HOH . F 3 HOH B 98 508 211 HOH HOH . F 3 HOH B 99 509 213 HOH HOH . F 3 HOH B 100 510 214 HOH HOH . F 3 HOH B 101 511 219 HOH HOH . F 3 HOH B 102 512 220 HOH HOH . F 3 HOH B 103 513 222 HOH HOH . F 3 HOH B 104 514 223 HOH HOH . F 3 HOH B 105 515 224 HOH HOH . F 3 HOH B 106 516 225 HOH HOH . F 3 HOH B 107 517 226 HOH HOH . F 3 HOH B 108 518 228 HOH HOH . F 3 HOH B 109 519 232 HOH HOH . F 3 HOH B 110 520 234 HOH HOH . F 3 HOH B 111 521 235 HOH HOH . F 3 HOH B 112 522 237 HOH HOH . F 3 HOH B 113 523 240 HOH HOH . F 3 HOH B 114 524 241 HOH HOH . F 3 HOH B 115 525 242 HOH HOH . F 3 HOH B 116 526 243 HOH HOH . F 3 HOH B 117 527 244 HOH HOH . F 3 HOH B 118 528 250 HOH HOH . F 3 HOH B 119 529 251 HOH HOH . F 3 HOH B 120 530 253 HOH HOH . F 3 HOH B 121 531 254 HOH HOH . F 3 HOH B 122 532 256 HOH HOH . F 3 HOH B 123 533 257 HOH HOH . F 3 HOH B 124 534 258 HOH HOH . F 3 HOH B 125 535 262 HOH HOH . F 3 HOH B 126 536 270 HOH HOH . F 3 HOH B 127 537 275 HOH HOH . F 3 HOH B 128 538 280 HOH HOH . F 3 HOH B 129 539 283 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MAE . . . C 2 36.825 19.447 -3.826 1 24.23 ? C1 MAE 410 A 1 HETATM 2 O O1 MAE . . . C 2 36.753 20.578 -3.283 1 21.93 ? O1 MAE 410 A 1 HETATM 3 O O2 MAE . . . C 2 36.922 18.438 -3.083 1 20.74 ? O2 MAE 410 A 1 HETATM 4 C C2 MAE . . . C 2 36.705 19.396 -5.314 1 26.71 ? C2 MAE 410 A 1 HETATM 5 C C3 MAE . . . C 2 36.472 18.333 -6.092 1 26.69 ? C3 MAE 410 A 1 HETATM 6 C C4 MAE . . . C 2 36.47 16.922 -5.656 1 24.81 ? C4 MAE 410 A 1 HETATM 7 O O3 MAE . . . C 2 35.552 16.354 -4.995 1 25.36 ? O3 MAE 410 A 1 HETATM 8 O O4 MAE . . . C 2 37.469 16.272 -6.006 1 23.66 ? O4 MAE 410 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #