data_1TPA # _model_server_result.job_id zbEZ-AMGo9wdd2SUZPwn0Q _model_server_result.datetime_utc '2024-12-23 14:39:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tpa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":462}' # _entry.id 1TPA # _exptl.entry_id 1TPA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1TPA _cell.length_a 75.5 _cell.length_b 84.4 _cell.length_c 122.9 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TPA _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA octameric 8 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_575 -x,-y+2,z -1 0 0 0 -1 0 0 0 1 0 168.8 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_575 x,-y+2,-z 1 0 0 0 -1 0 0 0 -1 0 168.8 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 E CYS 22 1_555 A SG CYS 137 E CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 25 E CYS 42 1_555 A SG CYS 41 E CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf3 A SG CYS 109 E CYS 128 1_555 A SG CYS 210 E CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 A SG CYS 116 E CYS 136 1_555 A SG CYS 183 E CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf5 A SG CYS 148 E CYS 168 1_555 A SG CYS 162 E CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf6 A SG CYS 173 E CYS 191 1_555 A SG CYS 197 E CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? disulf ? disulf7 B SG CYS 5 I CYS 5 1_555 B SG CYS 55 I CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? disulf ? disulf8 B SG CYS 14 I CYS 14 1_555 B SG CYS 38 I CYS 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? disulf ? disulf9 B SG CYS 30 I CYS 30 1_555 B SG CYS 51 I CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc1 A OE2 GLU 52 E GLU 70 1_555 C CA CA . E CA 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc2 A O ASN 54 E ASN 72 1_555 C CA CA . E CA 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc3 A O VAL 57 E VAL 75 1_555 C CA CA . E CA 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc4 A OE2 GLU 62 E GLU 80 1_555 C CA CA . E CA 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc5 C CA CA . E CA 462 1_555 D O HOH . E HOH 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc6 C CA CA . E CA 462 1_555 D O HOH . E HOH 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.704 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1TPA _atom_sites.fract_transf_matrix[1][1] 0.013245 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011848 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008137 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA E 1 462 462 CA CA . D 4 HOH E 1 401 401 HOH HOH . D 4 HOH E 2 402 402 HOH HOH . D 4 HOH E 3 405 405 HOH HOH . D 4 HOH E 4 406 406 HOH HOH . D 4 HOH E 5 407 407 HOH HOH . D 4 HOH E 6 408 408 HOH HOH . D 4 HOH E 7 409 409 HOH HOH . D 4 HOH E 8 410 410 HOH HOH . D 4 HOH E 9 411 411 HOH HOH . D 4 HOH E 10 412 412 HOH HOH . D 4 HOH E 11 414 414 HOH HOH . D 4 HOH E 12 415 415 HOH HOH . D 4 HOH E 13 416 416 HOH HOH . D 4 HOH E 14 425 425 HOH HOH . D 4 HOH E 15 429 429 HOH HOH . D 4 HOH E 16 430 430 HOH HOH . D 4 HOH E 17 431 431 HOH HOH . D 4 HOH E 18 434 434 HOH HOH . D 4 HOH E 19 435 435 HOH HOH . D 4 HOH E 20 436 436 HOH HOH . D 4 HOH E 21 437 437 HOH HOH . D 4 HOH E 22 438 438 HOH HOH . D 4 HOH E 23 439 439 HOH HOH . D 4 HOH E 24 445 445 HOH HOH . D 4 HOH E 25 447 447 HOH HOH . D 4 HOH E 26 448 448 HOH HOH . D 4 HOH E 27 456 456 HOH HOH . D 4 HOH E 28 457 457 HOH HOH . D 4 HOH E 29 463 463 HOH HOH . D 4 HOH E 30 465 465 HOH HOH . D 4 HOH E 31 466 466 HOH HOH . D 4 HOH E 32 469 469 HOH HOH . D 4 HOH E 33 470 470 HOH HOH . D 4 HOH E 34 473 473 HOH HOH . D 4 HOH E 35 475 475 HOH HOH . D 4 HOH E 36 476 476 HOH HOH . D 4 HOH E 37 477 477 HOH HOH . D 4 HOH E 38 479 479 HOH HOH . D 4 HOH E 39 481 481 HOH HOH . D 4 HOH E 40 483 483 HOH HOH . D 4 HOH E 41 487 487 HOH HOH . D 4 HOH E 42 489 489 HOH HOH . D 4 HOH E 43 491 491 HOH HOH . D 4 HOH E 44 495 495 HOH HOH . D 4 HOH E 45 498 498 HOH HOH . D 4 HOH E 46 499 499 HOH HOH . D 4 HOH E 47 502 502 HOH HOH . D 4 HOH E 48 514 514 HOH HOH . D 4 HOH E 49 515 515 HOH HOH . D 4 HOH E 50 516 516 HOH HOH . D 4 HOH E 51 519 519 HOH HOH . D 4 HOH E 52 520 520 HOH HOH . D 4 HOH E 53 522 522 HOH HOH . D 4 HOH E 54 523 523 HOH HOH . D 4 HOH E 55 524 524 HOH HOH . D 4 HOH E 56 526 526 HOH HOH . D 4 HOH E 57 527 527 HOH HOH . D 4 HOH E 58 528 528 HOH HOH . D 4 HOH E 59 529 529 HOH HOH . D 4 HOH E 60 530 530 HOH HOH . D 4 HOH E 61 531 531 HOH HOH . D 4 HOH E 62 534 534 HOH HOH . D 4 HOH E 63 540 540 HOH HOH . D 4 HOH E 64 541 541 HOH HOH . D 4 HOH E 65 542 542 HOH HOH . D 4 HOH E 66 543 543 HOH HOH . D 4 HOH E 67 544 544 HOH HOH . D 4 HOH E 68 545 545 HOH HOH . D 4 HOH E 69 547 547 HOH HOH . D 4 HOH E 70 549 549 HOH HOH . D 4 HOH E 71 550 550 HOH HOH . D 4 HOH E 72 551 551 HOH HOH . D 4 HOH E 73 552 552 HOH HOH . D 4 HOH E 74 554 554 HOH HOH . D 4 HOH E 75 555 555 HOH HOH . D 4 HOH E 76 556 556 HOH HOH . D 4 HOH E 77 559 559 HOH HOH . D 4 HOH E 78 560 560 HOH HOH . D 4 HOH E 79 561 561 HOH HOH . D 4 HOH E 80 562 562 HOH HOH . D 4 HOH E 81 563 563 HOH HOH . D 4 HOH E 82 566 566 HOH HOH . D 4 HOH E 83 570 570 HOH HOH . D 4 HOH E 84 571 571 HOH HOH . D 4 HOH E 85 572 572 HOH HOH . D 4 HOH E 86 573 573 HOH HOH . D 4 HOH E 87 574 574 HOH HOH . D 4 HOH E 88 575 575 HOH HOH . D 4 HOH E 89 576 576 HOH HOH . D 4 HOH E 90 577 577 HOH HOH . D 4 HOH E 91 582 582 HOH HOH . D 4 HOH E 92 583 583 HOH HOH . D 4 HOH E 93 585 585 HOH HOH . D 4 HOH E 94 591 591 HOH HOH . D 4 HOH E 95 592 592 HOH HOH . D 4 HOH E 96 593 593 HOH HOH . D 4 HOH E 97 594 594 HOH HOH . D 4 HOH E 98 595 595 HOH HOH . D 4 HOH E 99 597 597 HOH HOH . D 4 HOH E 100 598 598 HOH HOH . D 4 HOH E 101 599 599 HOH HOH . D 4 HOH E 102 601 601 HOH HOH . D 4 HOH E 103 602 602 HOH HOH . D 4 HOH E 104 603 603 HOH HOH . D 4 HOH E 105 605 605 HOH HOH . D 4 HOH E 106 606 606 HOH HOH . D 4 HOH E 107 607 607 HOH HOH . D 4 HOH E 108 608 608 HOH HOH . D 4 HOH E 109 609 609 HOH HOH . D 4 HOH E 110 610 610 HOH HOH . D 4 HOH E 111 611 611 HOH HOH . D 4 HOH E 112 612 612 HOH HOH . D 4 HOH E 113 613 613 HOH HOH . D 4 HOH E 114 615 615 HOH HOH . D 4 HOH E 115 616 616 HOH HOH . D 4 HOH E 116 617 617 HOH HOH . D 4 HOH E 117 618 618 HOH HOH . D 4 HOH E 118 619 619 HOH HOH . D 4 HOH E 119 620 620 HOH HOH . D 4 HOH E 120 621 621 HOH HOH . D 4 HOH E 121 622 622 HOH HOH . D 4 HOH E 122 623 623 HOH HOH . D 4 HOH E 123 624 624 HOH HOH . E 4 HOH I 1 400 400 HOH HOH . E 4 HOH I 2 403 403 HOH HOH . E 4 HOH I 3 404 404 HOH HOH . E 4 HOH I 4 413 413 HOH HOH . E 4 HOH I 5 417 417 HOH HOH . E 4 HOH I 6 419 419 HOH HOH . E 4 HOH I 7 420 420 HOH HOH . E 4 HOH I 8 421 421 HOH HOH . E 4 HOH I 9 422 422 HOH HOH . E 4 HOH I 10 423 423 HOH HOH . E 4 HOH I 11 426 426 HOH HOH . E 4 HOH I 12 427 427 HOH HOH . E 4 HOH I 13 450 450 HOH HOH . E 4 HOH I 14 455 455 HOH HOH . E 4 HOH I 15 501 501 HOH HOH . E 4 HOH I 16 503 503 HOH HOH . E 4 HOH I 17 505 505 HOH HOH . E 4 HOH I 18 507 507 HOH HOH . E 4 HOH I 19 508 508 HOH HOH . E 4 HOH I 20 511 511 HOH HOH . E 4 HOH I 21 512 512 HOH HOH . E 4 HOH I 22 532 532 HOH HOH . E 4 HOH I 23 533 533 HOH HOH . E 4 HOH I 24 536 536 HOH HOH . E 4 HOH I 25 537 537 HOH HOH . E 4 HOH I 26 538 538 HOH HOH . E 4 HOH I 27 564 564 HOH HOH . E 4 HOH I 28 568 568 HOH HOH . E 4 HOH I 29 569 569 HOH HOH . E 4 HOH I 30 587 587 HOH HOH . E 4 HOH I 31 588 588 HOH HOH . E 4 HOH I 32 589 589 HOH HOH . E 4 HOH I 33 590 590 HOH HOH . E 4 HOH I 34 600 600 HOH HOH . E 4 HOH I 35 604 604 HOH HOH . E 4 HOH I 36 614 614 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 6.368 _atom_site.Cartn_y 59.419 _atom_site.Cartn_z 2.516 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.85 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 462 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #