data_1TPH # _model_server_result.job_id 2LsDUPnjRDgQWxHYTC2lKQ _model_server_result.datetime_utc '2024-12-01 09:38:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tph # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":250}' # _entry.id 1TPH # _exptl.entry_id 1TPH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 171.046 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHOGLYCOLOHYDROXAMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1TPH _cell.length_a 136.4 _cell.length_b 74 _cell.length_c 57.2 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TPH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C2 H6 N O6 P' _chem_comp.formula_weight 171.046 _chem_comp.id PGH _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHOGLYCOLOHYDROXAMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PGH sing 237 n n C1 N2 PGH sing 238 n n C1 O1 PGH doub 239 n n C2 O1P PGH sing 240 n n C2 H21 PGH sing 241 n n C2 H22 PGH sing 242 n n N2 O2 PGH sing 243 n n N2 HN PGH sing 244 n n O2 HO2 PGH sing 245 n n O1P P PGH sing 246 n n O2P P PGH doub 247 n n O3P P PGH sing 248 n n O3P HOP3 PGH sing 249 n n O4P P PGH sing 250 n n O4P HOP4 PGH sing 251 n n # _atom_sites.entry_id 1TPH _atom_sites.fract_transf_matrix[1][1] 0.007331 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013514 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017483 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGH 1 1 250 250 PGH PGH . D 2 PGH 2 1 250 250 PGH PGH . E 3 HOH 1 1 301 301 HOH HOH . E 3 HOH 1 2 303 303 HOH HOH . E 3 HOH 1 3 306 306 HOH HOH . E 3 HOH 1 4 307 307 HOH HOH . E 3 HOH 1 5 308 308 HOH HOH . E 3 HOH 1 6 309 309 HOH HOH . E 3 HOH 1 7 310 310 HOH HOH . E 3 HOH 1 8 312 312 HOH HOH . E 3 HOH 1 9 314 314 HOH HOH . E 3 HOH 1 10 315 315 HOH HOH . E 3 HOH 1 11 316 316 HOH HOH . E 3 HOH 1 12 319 319 HOH HOH . E 3 HOH 1 13 320 320 HOH HOH . E 3 HOH 1 14 321 321 HOH HOH . E 3 HOH 1 15 322 322 HOH HOH . E 3 HOH 1 16 324 324 HOH HOH . E 3 HOH 1 17 326 326 HOH HOH . E 3 HOH 1 18 331 331 HOH HOH . E 3 HOH 1 19 332 332 HOH HOH . E 3 HOH 1 20 339 339 HOH HOH . E 3 HOH 1 21 340 340 HOH HOH . E 3 HOH 1 22 341 341 HOH HOH . E 3 HOH 1 23 342 342 HOH HOH . E 3 HOH 1 24 346 346 HOH HOH . E 3 HOH 1 25 347 347 HOH HOH . E 3 HOH 1 26 348 348 HOH HOH . E 3 HOH 1 27 350 350 HOH HOH . E 3 HOH 1 28 351 351 HOH HOH . E 3 HOH 1 29 352 352 HOH HOH . E 3 HOH 1 30 353 353 HOH HOH . E 3 HOH 1 31 356 356 HOH HOH . E 3 HOH 1 32 358 358 HOH HOH . E 3 HOH 1 33 359 359 HOH HOH . E 3 HOH 1 34 360 360 HOH HOH . E 3 HOH 1 35 364 364 HOH HOH . E 3 HOH 1 36 365 365 HOH HOH . E 3 HOH 1 37 366 366 HOH HOH . E 3 HOH 1 38 370 370 HOH HOH . E 3 HOH 1 39 371 371 HOH HOH . E 3 HOH 1 40 373 373 HOH HOH . E 3 HOH 1 41 374 374 HOH HOH . E 3 HOH 1 42 378 378 HOH HOH . E 3 HOH 1 43 379 379 HOH HOH . E 3 HOH 1 44 382 382 HOH HOH . E 3 HOH 1 45 383 383 HOH HOH . E 3 HOH 1 46 385 385 HOH HOH . E 3 HOH 1 47 388 388 HOH HOH . E 3 HOH 1 48 398 398 HOH HOH . E 3 HOH 1 49 400 400 HOH HOH . E 3 HOH 1 50 401 401 HOH HOH . E 3 HOH 1 51 404 404 HOH HOH . E 3 HOH 1 52 406 406 HOH HOH . E 3 HOH 1 53 408 408 HOH HOH . E 3 HOH 1 54 409 409 HOH HOH . E 3 HOH 1 55 416 416 HOH HOH . E 3 HOH 1 56 421 421 HOH HOH . E 3 HOH 1 57 423 423 HOH HOH . E 3 HOH 1 58 427 427 HOH HOH . E 3 HOH 1 59 429 429 HOH HOH . E 3 HOH 1 60 431 431 HOH HOH . E 3 HOH 1 61 435 435 HOH HOH . E 3 HOH 1 62 436 436 HOH HOH . E 3 HOH 1 63 437 437 HOH HOH . E 3 HOH 1 64 438 438 HOH HOH . E 3 HOH 1 65 439 439 HOH HOH . E 3 HOH 1 66 440 440 HOH HOH . E 3 HOH 1 67 441 441 HOH HOH . E 3 HOH 1 68 443 443 HOH HOH . E 3 HOH 1 69 444 444 HOH HOH . E 3 HOH 1 70 448 448 HOH HOH . E 3 HOH 1 71 452 452 HOH HOH . E 3 HOH 1 72 453 453 HOH HOH . E 3 HOH 1 73 455 455 HOH HOH . E 3 HOH 1 74 457 457 HOH HOH . E 3 HOH 1 75 459 459 HOH HOH . E 3 HOH 1 76 460 460 HOH HOH . E 3 HOH 1 77 462 462 HOH HOH . E 3 HOH 1 78 467 467 HOH HOH . E 3 HOH 1 79 468 468 HOH HOH . E 3 HOH 1 80 469 469 HOH HOH . E 3 HOH 1 81 470 470 HOH HOH . E 3 HOH 1 82 473 473 HOH HOH . E 3 HOH 1 83 475 475 HOH HOH . E 3 HOH 1 84 476 476 HOH HOH . E 3 HOH 1 85 478 478 HOH HOH . E 3 HOH 1 86 481 481 HOH HOH . E 3 HOH 1 87 482 482 HOH HOH . E 3 HOH 1 88 483 483 HOH HOH . E 3 HOH 1 89 484 484 HOH HOH . E 3 HOH 1 90 489 489 HOH HOH . E 3 HOH 1 91 493 493 HOH HOH . E 3 HOH 1 92 497 497 HOH HOH . E 3 HOH 1 93 498 498 HOH HOH . E 3 HOH 1 94 499 499 HOH HOH . E 3 HOH 1 95 500 500 HOH HOH . E 3 HOH 1 96 501 501 HOH HOH . E 3 HOH 1 97 502 502 HOH HOH . E 3 HOH 1 98 503 503 HOH HOH . E 3 HOH 1 99 504 504 HOH HOH . E 3 HOH 1 100 505 505 HOH HOH . E 3 HOH 1 101 506 506 HOH HOH . E 3 HOH 1 102 510 510 HOH HOH . E 3 HOH 1 103 511 511 HOH HOH . E 3 HOH 1 104 512 512 HOH HOH . E 3 HOH 1 105 513 513 HOH HOH . E 3 HOH 1 106 514 514 HOH HOH . E 3 HOH 1 107 517 517 HOH HOH . E 3 HOH 1 108 519 519 HOH HOH . E 3 HOH 1 109 520 520 HOH HOH . E 3 HOH 1 110 526 526 HOH HOH . E 3 HOH 1 111 527 527 HOH HOH . E 3 HOH 1 112 528 528 HOH HOH . E 3 HOH 1 113 531 531 HOH HOH . E 3 HOH 1 114 532 532 HOH HOH . E 3 HOH 1 115 534 534 HOH HOH . E 3 HOH 1 116 542 542 HOH HOH . E 3 HOH 1 117 545 545 HOH HOH . E 3 HOH 1 118 548 548 HOH HOH . E 3 HOH 1 119 549 549 HOH HOH . F 3 HOH 2 1 302 302 HOH HOH . F 3 HOH 2 2 304 304 HOH HOH . F 3 HOH 2 3 305 305 HOH HOH . F 3 HOH 2 4 311 311 HOH HOH . F 3 HOH 2 5 313 313 HOH HOH . F 3 HOH 2 6 317 317 HOH HOH . F 3 HOH 2 7 318 318 HOH HOH . F 3 HOH 2 8 323 323 HOH HOH . F 3 HOH 2 9 325 325 HOH HOH . F 3 HOH 2 10 327 327 HOH HOH . F 3 HOH 2 11 328 328 HOH HOH . F 3 HOH 2 12 329 329 HOH HOH . F 3 HOH 2 13 330 330 HOH HOH . F 3 HOH 2 14 333 333 HOH HOH . F 3 HOH 2 15 334 334 HOH HOH . F 3 HOH 2 16 335 335 HOH HOH . F 3 HOH 2 17 336 336 HOH HOH . F 3 HOH 2 18 337 337 HOH HOH . F 3 HOH 2 19 338 338 HOH HOH . F 3 HOH 2 20 343 343 HOH HOH . F 3 HOH 2 21 344 344 HOH HOH . F 3 HOH 2 22 345 345 HOH HOH . F 3 HOH 2 23 349 349 HOH HOH . F 3 HOH 2 24 354 354 HOH HOH . F 3 HOH 2 25 355 355 HOH HOH . F 3 HOH 2 26 357 357 HOH HOH . F 3 HOH 2 27 361 361 HOH HOH . F 3 HOH 2 28 362 362 HOH HOH . F 3 HOH 2 29 363 363 HOH HOH . F 3 HOH 2 30 367 367 HOH HOH . F 3 HOH 2 31 368 368 HOH HOH . F 3 HOH 2 32 369 369 HOH HOH . F 3 HOH 2 33 372 372 HOH HOH . F 3 HOH 2 34 375 375 HOH HOH . F 3 HOH 2 35 376 376 HOH HOH . F 3 HOH 2 36 377 377 HOH HOH . F 3 HOH 2 37 380 380 HOH HOH . F 3 HOH 2 38 381 381 HOH HOH . F 3 HOH 2 39 384 384 HOH HOH . F 3 HOH 2 40 386 386 HOH HOH . F 3 HOH 2 41 387 387 HOH HOH . F 3 HOH 2 42 389 389 HOH HOH . F 3 HOH 2 43 390 390 HOH HOH . F 3 HOH 2 44 391 391 HOH HOH . F 3 HOH 2 45 392 392 HOH HOH . F 3 HOH 2 46 393 393 HOH HOH . F 3 HOH 2 47 394 394 HOH HOH . F 3 HOH 2 48 395 395 HOH HOH . F 3 HOH 2 49 396 396 HOH HOH . F 3 HOH 2 50 397 397 HOH HOH . F 3 HOH 2 51 399 399 HOH HOH . F 3 HOH 2 52 402 402 HOH HOH . F 3 HOH 2 53 403 403 HOH HOH . F 3 HOH 2 54 405 405 HOH HOH . F 3 HOH 2 55 407 407 HOH HOH . F 3 HOH 2 56 410 410 HOH HOH . F 3 HOH 2 57 411 411 HOH HOH . F 3 HOH 2 58 412 412 HOH HOH . F 3 HOH 2 59 413 413 HOH HOH . F 3 HOH 2 60 414 414 HOH HOH . F 3 HOH 2 61 415 415 HOH HOH . F 3 HOH 2 62 417 417 HOH HOH . F 3 HOH 2 63 418 418 HOH HOH . F 3 HOH 2 64 419 419 HOH HOH . F 3 HOH 2 65 420 420 HOH HOH . F 3 HOH 2 66 422 422 HOH HOH . F 3 HOH 2 67 424 424 HOH HOH . F 3 HOH 2 68 425 425 HOH HOH . F 3 HOH 2 69 426 426 HOH HOH . F 3 HOH 2 70 428 428 HOH HOH . F 3 HOH 2 71 430 430 HOH HOH . F 3 HOH 2 72 432 432 HOH HOH . F 3 HOH 2 73 433 433 HOH HOH . F 3 HOH 2 74 434 434 HOH HOH . F 3 HOH 2 75 442 442 HOH HOH . F 3 HOH 2 76 445 445 HOH HOH . F 3 HOH 2 77 446 446 HOH HOH . F 3 HOH 2 78 447 447 HOH HOH . F 3 HOH 2 79 449 449 HOH HOH . F 3 HOH 2 80 450 450 HOH HOH . F 3 HOH 2 81 451 451 HOH HOH . F 3 HOH 2 82 454 454 HOH HOH . F 3 HOH 2 83 456 456 HOH HOH . F 3 HOH 2 84 458 458 HOH HOH . F 3 HOH 2 85 461 461 HOH HOH . F 3 HOH 2 86 463 463 HOH HOH . F 3 HOH 2 87 464 464 HOH HOH . F 3 HOH 2 88 465 465 HOH HOH . F 3 HOH 2 89 466 466 HOH HOH . F 3 HOH 2 90 471 471 HOH HOH . F 3 HOH 2 91 472 472 HOH HOH . F 3 HOH 2 92 474 474 HOH HOH . F 3 HOH 2 93 477 477 HOH HOH . F 3 HOH 2 94 479 479 HOH HOH . F 3 HOH 2 95 480 480 HOH HOH . F 3 HOH 2 96 485 485 HOH HOH . F 3 HOH 2 97 486 486 HOH HOH . F 3 HOH 2 98 487 487 HOH HOH . F 3 HOH 2 99 488 488 HOH HOH . F 3 HOH 2 100 490 490 HOH HOH . F 3 HOH 2 101 491 491 HOH HOH . F 3 HOH 2 102 492 492 HOH HOH . F 3 HOH 2 103 494 494 HOH HOH . F 3 HOH 2 104 495 495 HOH HOH . F 3 HOH 2 105 496 496 HOH HOH . F 3 HOH 2 106 507 507 HOH HOH . F 3 HOH 2 107 508 508 HOH HOH . F 3 HOH 2 108 509 509 HOH HOH . F 3 HOH 2 109 515 515 HOH HOH . F 3 HOH 2 110 516 516 HOH HOH . F 3 HOH 2 111 518 518 HOH HOH . F 3 HOH 2 112 521 521 HOH HOH . F 3 HOH 2 113 522 522 HOH HOH . F 3 HOH 2 114 523 523 HOH HOH . F 3 HOH 2 115 524 524 HOH HOH . F 3 HOH 2 116 525 525 HOH HOH . F 3 HOH 2 117 529 529 HOH HOH . F 3 HOH 2 118 530 530 HOH HOH . F 3 HOH 2 119 533 533 HOH HOH . F 3 HOH 2 120 535 535 HOH HOH . F 3 HOH 2 121 536 536 HOH HOH . F 3 HOH 2 122 537 537 HOH HOH . F 3 HOH 2 123 538 538 HOH HOH . F 3 HOH 2 124 539 539 HOH HOH . F 3 HOH 2 125 540 540 HOH HOH . F 3 HOH 2 126 541 541 HOH HOH . F 3 HOH 2 127 543 543 HOH HOH . F 3 HOH 2 128 544 544 HOH HOH . F 3 HOH 2 129 546 546 HOH HOH . F 3 HOH 2 130 547 547 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGH . . . D 2 -9.352 22.214 26.218 1 10.98 ? C1 PGH 250 2 1 HETATM 2 C C2 PGH . . . D 2 -10.597 21.376 26.002 1 9.53 ? C2 PGH 250 2 1 HETATM 3 N N2 PGH . . . D 2 -9.472 23.369 26.8 1 10.99 ? N2 PGH 250 2 1 HETATM 4 O O2 PGH . . . D 2 -8.285 24.105 26.983 1 11.91 ? O2 PGH 250 2 1 HETATM 5 O O1 PGH . . . D 2 -8.281 21.679 25.832 1 11.11 ? O1 PGH 250 2 1 HETATM 6 O O1P PGH . . . D 2 -10.477 20.833 24.659 1 8.96 ? O1P PGH 250 2 1 HETATM 7 O O2P PGH . . . D 2 -11.609 19.682 22.504 1 7.25 ? O2P PGH 250 2 1 HETATM 8 O O3P PGH . . . D 2 -12.226 18.766 24.96 1 8.52 ? O3P PGH 250 2 1 HETATM 9 O O4P PGH . . . D 2 -13.22 21.177 24.107 1 8.78 ? O4P PGH 250 2 1 HETATM 10 P P PGH . . . D 2 -11.857 20.035 24.002 1 7.4 ? P PGH 250 2 1 # _model_server_stats.io_time_ms 539 _model_server_stats.parse_time_ms 449 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 1056 _model_server_stats.encode_time_ms 23 _model_server_stats.element_count 10 #