data_1TPS # _model_server_result.job_id DjNjFkD5mj-r4AwNbSyyZw _model_server_result.datetime_utc '2025-03-06 00:07:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tps # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":247}' # _entry.id 1TPS # _exptl.entry_id 1TPS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1TPS _cell.length_a 63.74 _cell.length_b 63.55 _cell.length_c 69.1 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TPS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? covale ? covale1 B C24 OSL 1 B OSL 246 1_555 B N DLE 2 B DLE 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale2 B C DLE 2 B DLE 247 1_555 B N THR 3 B THR 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 B OG1 THR 3 B THR 248 1_555 B C VAL 8 B VAL 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.302 ? covale ? covale4 B C GLU 5 B GLU 250 1_555 B N LEU 6 B LEU 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? covale ? covale5 B CD GLU 5 B GLU 250 1_555 B N LEU 6 B LEU 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.476 ? covale ? covale6 B C LEU 6 B LEU 251 1_555 B N YNM 7 B YNM 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale7 B C YNM 7 B YNM 252 1_555 B N VAL 8 B VAL 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 A OE1 GLU 52 A GLU 70 1_555 C CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc2 A O ASN 54 A ASN 72 1_555 C CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc3 A O VAL 57 A VAL 75 1_555 C CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc4 A OE2 GLU 62 A GLU 80 1_555 C CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc5 C CA CA . A CA 247 1_555 D O HOH . A HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? metalc ? metalc6 C CA CA . A CA 247 1_555 D O HOH . A HOH 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1TPS _atom_sites.fract_transf_matrix[1][1] 0.015689 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015736 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014472 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 247 247 CA CA . D 4 HOH A 1 255 255 HOH HOH . D 4 HOH A 2 256 256 HOH HOH . D 4 HOH A 3 257 257 HOH HOH . D 4 HOH A 4 258 258 HOH HOH . D 4 HOH A 5 259 259 HOH HOH . D 4 HOH A 6 260 260 HOH HOH . D 4 HOH A 7 261 261 HOH HOH . D 4 HOH A 8 262 262 HOH HOH . D 4 HOH A 9 263 263 HOH HOH . D 4 HOH A 10 264 264 HOH HOH . D 4 HOH A 11 265 265 HOH HOH . D 4 HOH A 12 266 266 HOH HOH . D 4 HOH A 13 267 267 HOH HOH . D 4 HOH A 14 268 268 HOH HOH . D 4 HOH A 15 269 269 HOH HOH . D 4 HOH A 16 270 270 HOH HOH . D 4 HOH A 17 271 271 HOH HOH . D 4 HOH A 18 272 272 HOH HOH . D 4 HOH A 19 273 273 HOH HOH . D 4 HOH A 20 274 274 HOH HOH . D 4 HOH A 21 275 275 HOH HOH . D 4 HOH A 22 276 276 HOH HOH . D 4 HOH A 23 277 277 HOH HOH . D 4 HOH A 24 278 278 HOH HOH . D 4 HOH A 25 279 279 HOH HOH . D 4 HOH A 26 280 280 HOH HOH . D 4 HOH A 27 281 281 HOH HOH . D 4 HOH A 28 282 282 HOH HOH . D 4 HOH A 29 283 283 HOH HOH . D 4 HOH A 30 284 284 HOH HOH . D 4 HOH A 31 285 285 HOH HOH . D 4 HOH A 32 286 286 HOH HOH . D 4 HOH A 33 287 287 HOH HOH . D 4 HOH A 34 288 288 HOH HOH . D 4 HOH A 35 289 289 HOH HOH . D 4 HOH A 36 290 290 HOH HOH . D 4 HOH A 37 291 291 HOH HOH . D 4 HOH A 38 292 292 HOH HOH . D 4 HOH A 39 293 293 HOH HOH . D 4 HOH A 40 295 295 HOH HOH . D 4 HOH A 41 296 296 HOH HOH . D 4 HOH A 42 298 298 HOH HOH . D 4 HOH A 43 299 299 HOH HOH . D 4 HOH A 44 300 300 HOH HOH . D 4 HOH A 45 302 302 HOH HOH . D 4 HOH A 46 303 303 HOH HOH . D 4 HOH A 47 304 304 HOH HOH . D 4 HOH A 48 305 305 HOH HOH . D 4 HOH A 49 306 306 HOH HOH . D 4 HOH A 50 307 307 HOH HOH . D 4 HOH A 51 308 308 HOH HOH . D 4 HOH A 52 309 309 HOH HOH . D 4 HOH A 53 310 310 HOH HOH . D 4 HOH A 54 311 311 HOH HOH . D 4 HOH A 55 312 312 HOH HOH . D 4 HOH A 56 313 313 HOH HOH . D 4 HOH A 57 314 314 HOH HOH . D 4 HOH A 58 315 315 HOH HOH . D 4 HOH A 59 316 316 HOH HOH . D 4 HOH A 60 317 317 HOH HOH . D 4 HOH A 61 318 318 HOH HOH . D 4 HOH A 62 319 319 HOH HOH . D 4 HOH A 63 320 320 HOH HOH . D 4 HOH A 64 321 321 HOH HOH . D 4 HOH A 65 322 322 HOH HOH . D 4 HOH A 66 323 323 HOH HOH . D 4 HOH A 67 324 324 HOH HOH . D 4 HOH A 68 325 325 HOH HOH . D 4 HOH A 69 326 326 HOH HOH . D 4 HOH A 70 327 327 HOH HOH . D 4 HOH A 71 328 328 HOH HOH . D 4 HOH A 72 329 329 HOH HOH . D 4 HOH A 73 330 330 HOH HOH . D 4 HOH A 74 331 331 HOH HOH . D 4 HOH A 75 332 332 HOH HOH . D 4 HOH A 76 333 333 HOH HOH . D 4 HOH A 77 334 334 HOH HOH . D 4 HOH A 78 335 335 HOH HOH . D 4 HOH A 79 336 336 HOH HOH . D 4 HOH A 80 337 337 HOH HOH . D 4 HOH A 81 338 338 HOH HOH . D 4 HOH A 82 339 339 HOH HOH . D 4 HOH A 83 340 340 HOH HOH . D 4 HOH A 84 341 341 HOH HOH . D 4 HOH A 85 342 342 HOH HOH . D 4 HOH A 86 343 343 HOH HOH . D 4 HOH A 87 344 344 HOH HOH . D 4 HOH A 88 345 345 HOH HOH . D 4 HOH A 89 346 346 HOH HOH . D 4 HOH A 90 347 347 HOH HOH . D 4 HOH A 91 348 348 HOH HOH . D 4 HOH A 92 349 349 HOH HOH . D 4 HOH A 93 350 350 HOH HOH . D 4 HOH A 94 351 351 HOH HOH . D 4 HOH A 95 352 352 HOH HOH . D 4 HOH A 96 353 353 HOH HOH . D 4 HOH A 97 354 354 HOH HOH . D 4 HOH A 98 355 355 HOH HOH . D 4 HOH A 99 356 356 HOH HOH . D 4 HOH A 100 357 357 HOH HOH . D 4 HOH A 101 358 358 HOH HOH . D 4 HOH A 102 459 459 HOH HOH . D 4 HOH A 103 460 460 HOH HOH . D 4 HOH A 104 461 461 HOH HOH . D 4 HOH A 105 462 462 HOH HOH . D 4 HOH A 106 463 463 HOH HOH . D 4 HOH A 107 465 465 HOH HOH . D 4 HOH A 108 466 466 HOH HOH . D 4 HOH A 109 467 467 HOH HOH . D 4 HOH A 110 468 468 HOH HOH . D 4 HOH A 111 469 469 HOH HOH . D 4 HOH A 112 470 470 HOH HOH . D 4 HOH A 113 471 471 HOH HOH . D 4 HOH A 114 472 472 HOH HOH . D 4 HOH A 115 474 474 HOH HOH . D 4 HOH A 116 475 475 HOH HOH . D 4 HOH A 117 476 476 HOH HOH . D 4 HOH A 118 477 477 HOH HOH . D 4 HOH A 119 478 478 HOH HOH . D 4 HOH A 120 479 479 HOH HOH . D 4 HOH A 121 480 480 HOH HOH . D 4 HOH A 122 481 481 HOH HOH . D 4 HOH A 123 482 482 HOH HOH . D 4 HOH A 124 483 483 HOH HOH . D 4 HOH A 125 484 484 HOH HOH . D 4 HOH A 126 485 485 HOH HOH . D 4 HOH A 127 486 486 HOH HOH . D 4 HOH A 128 487 487 HOH HOH . D 4 HOH A 129 488 488 HOH HOH . D 4 HOH A 130 489 489 HOH HOH . D 4 HOH A 131 490 490 HOH HOH . D 4 HOH A 132 491 491 HOH HOH . D 4 HOH A 133 492 492 HOH HOH . D 4 HOH A 134 493 493 HOH HOH . D 4 HOH A 135 494 494 HOH HOH . D 4 HOH A 136 495 495 HOH HOH . D 4 HOH A 137 496 496 HOH HOH . D 4 HOH A 138 497 497 HOH HOH . D 4 HOH A 139 498 498 HOH HOH . D 4 HOH A 140 499 499 HOH HOH . D 4 HOH A 141 501 501 HOH HOH . D 4 HOH A 142 502 502 HOH HOH . D 4 HOH A 143 503 503 HOH HOH . D 4 HOH A 144 504 504 HOH HOH . D 4 HOH A 145 505 505 HOH HOH . D 4 HOH A 146 506 506 HOH HOH . D 4 HOH A 147 507 507 HOH HOH . D 4 HOH A 148 508 508 HOH HOH . D 4 HOH A 149 509 509 HOH HOH . D 4 HOH A 150 510 510 HOH HOH . D 4 HOH A 151 511 511 HOH HOH . D 4 HOH A 152 512 512 HOH HOH . D 4 HOH A 153 513 513 HOH HOH . D 4 HOH A 154 514 514 HOH HOH . D 4 HOH A 155 515 515 HOH HOH . D 4 HOH A 156 516 516 HOH HOH . D 4 HOH A 157 517 517 HOH HOH . D 4 HOH A 158 518 518 HOH HOH . D 4 HOH A 159 519 519 HOH HOH . D 4 HOH A 160 521 521 HOH HOH . D 4 HOH A 161 522 522 HOH HOH . D 4 HOH A 162 523 523 HOH HOH . E 4 HOH B 1 294 294 HOH HOH . E 4 HOH B 2 301 301 HOH HOH . E 4 HOH B 3 464 464 HOH HOH . E 4 HOH B 4 473 473 HOH HOH . E 4 HOH B 5 500 500 HOH HOH . E 4 HOH B 6 520 520 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -0.312 _atom_site.Cartn_y -7.224 _atom_site.Cartn_z 35.017 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 9.97 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 247 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #