data_1TPU # _model_server_result.job_id WnU9bx6inPZKPONA8glUvQ _model_server_result.datetime_utc '2025-09-04 15:06:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tpu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":250}' # _entry.id 1TPU # _exptl.entry_id 1TPU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 171.046 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHOGLYCOLOHYDROXAMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1TPU _cell.length_a 136.3 _cell.length_b 74.1 _cell.length_c 57.3 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TPU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C2 H6 N O6 P' _chem_comp.formula_weight 171.046 _chem_comp.id PGH _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHOGLYCOLOHYDROXAMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PGH sing 237 n n C1 N2 PGH sing 238 n n C1 O1 PGH doub 239 n n C2 O1P PGH sing 240 n n C2 H21 PGH sing 241 n n C2 H22 PGH sing 242 n n N2 O2 PGH sing 243 n n N2 HN PGH sing 244 n n O2 HO2 PGH sing 245 n n O1P P PGH sing 246 n n O2P P PGH doub 247 n n O3P P PGH sing 248 n n O3P HOP3 PGH sing 249 n n O4P P PGH sing 250 n n O4P HOP4 PGH sing 251 n n # _atom_sites.entry_id 1TPU _atom_sites.fract_transf_matrix[1][1] 0.007337 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013495 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017452 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGH A 1 250 250 PGH PGH . D 2 PGH B 1 250 250 PGH PGH . E 3 HOH A 1 601 601 HOH HOH . E 3 HOH A 2 602 602 HOH HOH . E 3 HOH A 3 604 604 HOH HOH . E 3 HOH A 4 605 605 HOH HOH . E 3 HOH A 5 606 606 HOH HOH . E 3 HOH A 6 607 607 HOH HOH . E 3 HOH A 7 609 609 HOH HOH . E 3 HOH A 8 610 610 HOH HOH . E 3 HOH A 9 612 612 HOH HOH . E 3 HOH A 10 613 613 HOH HOH . E 3 HOH A 11 614 614 HOH HOH . E 3 HOH A 12 617 617 HOH HOH . E 3 HOH A 13 618 618 HOH HOH . E 3 HOH A 14 619 619 HOH HOH . E 3 HOH A 15 620 620 HOH HOH . E 3 HOH A 16 622 622 HOH HOH . E 3 HOH A 17 624 624 HOH HOH . E 3 HOH A 18 625 625 HOH HOH . E 3 HOH A 19 627 627 HOH HOH . E 3 HOH A 20 628 628 HOH HOH . E 3 HOH A 21 629 629 HOH HOH . E 3 HOH A 22 630 630 HOH HOH . E 3 HOH A 23 632 632 HOH HOH . E 3 HOH A 24 633 633 HOH HOH . E 3 HOH A 25 635 635 HOH HOH . E 3 HOH A 26 636 636 HOH HOH . E 3 HOH A 27 637 637 HOH HOH . E 3 HOH A 28 638 638 HOH HOH . E 3 HOH A 29 641 641 HOH HOH . E 3 HOH A 30 645 645 HOH HOH . E 3 HOH A 31 646 646 HOH HOH . E 3 HOH A 32 648 648 HOH HOH . E 3 HOH A 33 652 652 HOH HOH . E 3 HOH A 34 655 655 HOH HOH . E 3 HOH A 35 656 656 HOH HOH . E 3 HOH A 36 660 660 HOH HOH . E 3 HOH A 37 661 661 HOH HOH . E 3 HOH A 38 662 662 HOH HOH . E 3 HOH A 39 663 663 HOH HOH . E 3 HOH A 40 667 667 HOH HOH . E 3 HOH A 41 668 668 HOH HOH . E 3 HOH A 42 669 669 HOH HOH . E 3 HOH A 43 674 674 HOH HOH . E 3 HOH A 44 675 675 HOH HOH . E 3 HOH A 45 677 677 HOH HOH . E 3 HOH A 46 679 679 HOH HOH . E 3 HOH A 47 680 680 HOH HOH . E 3 HOH A 48 681 681 HOH HOH . E 3 HOH A 49 682 682 HOH HOH . E 3 HOH A 50 683 683 HOH HOH . E 3 HOH A 51 686 686 HOH HOH . E 3 HOH A 52 687 687 HOH HOH . E 3 HOH A 53 690 690 HOH HOH . E 3 HOH A 54 692 692 HOH HOH . E 3 HOH A 55 693 693 HOH HOH . E 3 HOH A 56 695 695 HOH HOH . E 3 HOH A 57 698 698 HOH HOH . E 3 HOH A 58 701 701 HOH HOH . E 3 HOH A 59 703 703 HOH HOH . E 3 HOH A 60 706 706 HOH HOH . E 3 HOH A 61 708 708 HOH HOH . E 3 HOH A 62 709 709 HOH HOH . E 3 HOH A 63 717 717 HOH HOH . E 3 HOH A 64 719 719 HOH HOH . E 3 HOH A 65 720 720 HOH HOH . E 3 HOH A 66 721 721 HOH HOH . E 3 HOH A 67 722 722 HOH HOH . E 3 HOH A 68 724 724 HOH HOH . E 3 HOH A 69 728 728 HOH HOH . E 3 HOH A 70 730 730 HOH HOH . E 3 HOH A 71 736 736 HOH HOH . E 3 HOH A 72 741 741 HOH HOH . E 3 HOH A 73 743 743 HOH HOH . E 3 HOH A 74 744 744 HOH HOH . E 3 HOH A 75 746 746 HOH HOH . E 3 HOH A 76 750 750 HOH HOH . E 3 HOH A 77 759 759 HOH HOH . E 3 HOH A 78 762 762 HOH HOH . E 3 HOH A 79 765 765 HOH HOH . E 3 HOH A 80 772 772 HOH HOH . E 3 HOH A 81 773 773 HOH HOH . E 3 HOH A 82 777 777 HOH HOH . E 3 HOH A 83 779 779 HOH HOH . E 3 HOH A 84 780 780 HOH HOH . E 3 HOH A 85 781 781 HOH HOH . E 3 HOH A 86 784 784 HOH HOH . E 3 HOH A 87 786 786 HOH HOH . E 3 HOH A 88 787 787 HOH HOH . E 3 HOH A 89 789 789 HOH HOH . E 3 HOH A 90 791 791 HOH HOH . E 3 HOH A 91 792 792 HOH HOH . E 3 HOH A 92 793 793 HOH HOH . E 3 HOH A 93 795 795 HOH HOH . E 3 HOH A 94 796 796 HOH HOH . E 3 HOH A 95 797 797 HOH HOH . E 3 HOH A 96 798 798 HOH HOH . E 3 HOH A 97 800 800 HOH HOH . E 3 HOH A 98 804 804 HOH HOH . E 3 HOH A 99 807 807 HOH HOH . E 3 HOH A 100 808 808 HOH HOH . E 3 HOH A 101 810 810 HOH HOH . E 3 HOH A 102 811 811 HOH HOH . E 3 HOH A 103 812 812 HOH HOH . E 3 HOH A 104 814 814 HOH HOH . E 3 HOH A 105 815 815 HOH HOH . E 3 HOH A 106 816 816 HOH HOH . E 3 HOH A 107 817 817 HOH HOH . E 3 HOH A 108 818 818 HOH HOH . E 3 HOH A 109 821 821 HOH HOH . E 3 HOH A 110 824 824 HOH HOH . E 3 HOH A 111 825 825 HOH HOH . E 3 HOH A 112 826 826 HOH HOH . E 3 HOH A 113 827 827 HOH HOH . E 3 HOH A 114 828 828 HOH HOH . E 3 HOH A 115 829 829 HOH HOH . E 3 HOH A 116 830 830 HOH HOH . E 3 HOH A 117 832 832 HOH HOH . E 3 HOH A 118 834 834 HOH HOH . E 3 HOH A 119 837 837 HOH HOH . E 3 HOH A 120 839 839 HOH HOH . E 3 HOH A 121 840 840 HOH HOH . E 3 HOH A 122 842 842 HOH HOH . E 3 HOH A 123 844 844 HOH HOH . E 3 HOH A 124 847 847 HOH HOH . E 3 HOH A 125 848 848 HOH HOH . E 3 HOH A 126 849 849 HOH HOH . E 3 HOH A 127 850 850 HOH HOH . E 3 HOH A 128 851 851 HOH HOH . E 3 HOH A 129 853 853 HOH HOH . E 3 HOH A 130 854 854 HOH HOH . E 3 HOH A 131 857 857 HOH HOH . E 3 HOH A 132 865 865 HOH HOH . E 3 HOH A 133 866 866 HOH HOH . E 3 HOH A 134 867 867 HOH HOH . E 3 HOH A 135 870 870 HOH HOH . E 3 HOH A 136 871 871 HOH HOH . E 3 HOH A 137 874 874 HOH HOH . E 3 HOH A 138 878 878 HOH HOH . E 3 HOH A 139 881 881 HOH HOH . E 3 HOH A 140 883 883 HOH HOH . E 3 HOH A 141 885 885 HOH HOH . E 3 HOH A 142 886 886 HOH HOH . F 3 HOH B 1 603 603 HOH HOH . F 3 HOH B 2 608 608 HOH HOH . F 3 HOH B 3 611 611 HOH HOH . F 3 HOH B 4 615 615 HOH HOH . F 3 HOH B 5 616 616 HOH HOH . F 3 HOH B 6 621 621 HOH HOH . F 3 HOH B 7 623 623 HOH HOH . F 3 HOH B 8 626 626 HOH HOH . F 3 HOH B 9 631 631 HOH HOH . F 3 HOH B 10 634 634 HOH HOH . F 3 HOH B 11 639 639 HOH HOH . F 3 HOH B 12 640 640 HOH HOH . F 3 HOH B 13 642 642 HOH HOH . F 3 HOH B 14 643 643 HOH HOH . F 3 HOH B 15 644 644 HOH HOH . F 3 HOH B 16 647 647 HOH HOH . F 3 HOH B 17 649 649 HOH HOH . F 3 HOH B 18 650 650 HOH HOH . F 3 HOH B 19 651 651 HOH HOH . F 3 HOH B 20 653 653 HOH HOH . F 3 HOH B 21 654 654 HOH HOH . F 3 HOH B 22 657 657 HOH HOH . F 3 HOH B 23 658 658 HOH HOH . F 3 HOH B 24 659 659 HOH HOH . F 3 HOH B 25 664 664 HOH HOH . F 3 HOH B 26 665 665 HOH HOH . F 3 HOH B 27 666 666 HOH HOH . F 3 HOH B 28 670 670 HOH HOH . F 3 HOH B 29 671 671 HOH HOH . F 3 HOH B 30 672 672 HOH HOH . F 3 HOH B 31 673 673 HOH HOH . F 3 HOH B 32 676 676 HOH HOH . F 3 HOH B 33 678 678 HOH HOH . F 3 HOH B 34 684 684 HOH HOH . F 3 HOH B 35 685 685 HOH HOH . F 3 HOH B 36 688 688 HOH HOH . F 3 HOH B 37 689 689 HOH HOH . F 3 HOH B 38 691 691 HOH HOH . F 3 HOH B 39 694 694 HOH HOH . F 3 HOH B 40 696 696 HOH HOH . F 3 HOH B 41 697 697 HOH HOH . F 3 HOH B 42 699 699 HOH HOH . F 3 HOH B 43 700 700 HOH HOH . F 3 HOH B 44 702 702 HOH HOH . F 3 HOH B 45 704 704 HOH HOH . F 3 HOH B 46 705 705 HOH HOH . F 3 HOH B 47 707 707 HOH HOH . F 3 HOH B 48 710 710 HOH HOH . F 3 HOH B 49 711 711 HOH HOH . F 3 HOH B 50 712 712 HOH HOH . F 3 HOH B 51 713 713 HOH HOH . F 3 HOH B 52 714 714 HOH HOH . F 3 HOH B 53 715 715 HOH HOH . F 3 HOH B 54 716 716 HOH HOH . F 3 HOH B 55 718 718 HOH HOH . F 3 HOH B 56 723 723 HOH HOH . F 3 HOH B 57 725 725 HOH HOH . F 3 HOH B 58 726 726 HOH HOH . F 3 HOH B 59 727 727 HOH HOH . F 3 HOH B 60 729 729 HOH HOH . F 3 HOH B 61 731 731 HOH HOH . F 3 HOH B 62 732 732 HOH HOH . F 3 HOH B 63 733 733 HOH HOH . F 3 HOH B 64 734 734 HOH HOH . F 3 HOH B 65 735 735 HOH HOH . F 3 HOH B 66 737 737 HOH HOH . F 3 HOH B 67 738 738 HOH HOH . F 3 HOH B 68 739 739 HOH HOH . F 3 HOH B 69 740 740 HOH HOH . F 3 HOH B 70 742 742 HOH HOH . F 3 HOH B 71 745 745 HOH HOH . F 3 HOH B 72 747 747 HOH HOH . F 3 HOH B 73 748 748 HOH HOH . F 3 HOH B 74 749 749 HOH HOH . F 3 HOH B 75 751 751 HOH HOH . F 3 HOH B 76 752 752 HOH HOH . F 3 HOH B 77 753 753 HOH HOH . F 3 HOH B 78 754 754 HOH HOH . F 3 HOH B 79 755 755 HOH HOH . F 3 HOH B 80 756 756 HOH HOH . F 3 HOH B 81 757 757 HOH HOH . F 3 HOH B 82 758 758 HOH HOH . F 3 HOH B 83 760 760 HOH HOH . F 3 HOH B 84 761 761 HOH HOH . F 3 HOH B 85 763 763 HOH HOH . F 3 HOH B 86 764 764 HOH HOH . F 3 HOH B 87 766 766 HOH HOH . F 3 HOH B 88 767 767 HOH HOH . F 3 HOH B 89 768 768 HOH HOH . F 3 HOH B 90 769 769 HOH HOH . F 3 HOH B 91 770 770 HOH HOH . F 3 HOH B 92 771 771 HOH HOH . F 3 HOH B 93 774 774 HOH HOH . F 3 HOH B 94 775 775 HOH HOH . F 3 HOH B 95 776 776 HOH HOH . F 3 HOH B 96 778 778 HOH HOH . F 3 HOH B 97 782 782 HOH HOH . F 3 HOH B 98 783 783 HOH HOH . F 3 HOH B 99 785 785 HOH HOH . F 3 HOH B 100 788 788 HOH HOH . F 3 HOH B 101 790 790 HOH HOH . F 3 HOH B 102 794 794 HOH HOH . F 3 HOH B 103 799 799 HOH HOH . F 3 HOH B 104 801 801 HOH HOH . F 3 HOH B 105 802 802 HOH HOH . F 3 HOH B 106 803 803 HOH HOH . F 3 HOH B 107 805 805 HOH HOH . F 3 HOH B 108 806 806 HOH HOH . F 3 HOH B 109 809 809 HOH HOH . F 3 HOH B 110 813 813 HOH HOH . F 3 HOH B 111 819 819 HOH HOH . F 3 HOH B 112 820 820 HOH HOH . F 3 HOH B 113 822 822 HOH HOH . F 3 HOH B 114 823 823 HOH HOH . F 3 HOH B 115 831 831 HOH HOH . F 3 HOH B 116 833 833 HOH HOH . F 3 HOH B 117 835 835 HOH HOH . F 3 HOH B 118 836 836 HOH HOH . F 3 HOH B 119 838 838 HOH HOH . F 3 HOH B 120 841 841 HOH HOH . F 3 HOH B 121 843 843 HOH HOH . F 3 HOH B 122 845 845 HOH HOH . F 3 HOH B 123 846 846 HOH HOH . F 3 HOH B 124 852 852 HOH HOH . F 3 HOH B 125 855 855 HOH HOH . F 3 HOH B 126 856 856 HOH HOH . F 3 HOH B 127 858 858 HOH HOH . F 3 HOH B 128 859 859 HOH HOH . F 3 HOH B 129 860 860 HOH HOH . F 3 HOH B 130 861 861 HOH HOH . F 3 HOH B 131 862 862 HOH HOH . F 3 HOH B 132 863 863 HOH HOH . F 3 HOH B 133 864 864 HOH HOH . F 3 HOH B 134 868 868 HOH HOH . F 3 HOH B 135 869 869 HOH HOH . F 3 HOH B 136 872 872 HOH HOH . F 3 HOH B 137 873 873 HOH HOH . F 3 HOH B 138 875 875 HOH HOH . F 3 HOH B 139 876 876 HOH HOH . F 3 HOH B 140 877 877 HOH HOH . F 3 HOH B 141 879 879 HOH HOH . F 3 HOH B 142 880 880 HOH HOH . F 3 HOH B 143 882 882 HOH HOH . F 3 HOH B 144 884 884 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGH . . . C 2 24.008 30.421 19.559 1 46.01 ? C1 PGH 250 A 1 HETATM 2 C C2 PGH . . . C 2 25.225 30.932 20.329 1 43.5 ? C2 PGH 250 A 1 HETATM 3 N N2 PGH . . . C 2 24.299 29.721 18.46 1 48.33 ? N2 PGH 250 A 1 HETATM 4 O O2 PGH . . . C 2 24.922 28.474 18.524 1 46.72 ? O2 PGH 250 A 1 HETATM 5 O O1 PGH . . . C 2 22.87 30.669 19.938 1 48.47 ? O1 PGH 250 A 1 HETATM 6 O O1P PGH . . . C 2 24.834 31.941 21.261 1 35.01 ? O1P PGH 250 A 1 HETATM 7 O O2P PGH . . . C 2 25.239 34.125 22.427 1 27.09 ? O2P PGH 250 A 1 HETATM 8 O O3P PGH . . . C 2 26.381 33.564 20.324 1 25.54 ? O3P PGH 250 A 1 HETATM 9 O O4P PGH . . . C 2 26.948 32.366 22.485 1 27.47 ? O4P PGH 250 A 1 HETATM 10 P P PGH . . . C 2 25.892 32.978 21.654 1 24.06 ? P PGH 250 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #