data_1TPV # _model_server_result.job_id rVB7n70xNQD2H4Ids1MGJQ _model_server_result.datetime_utc '2025-04-04 02:44:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tpv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":250}' # _entry.id 1TPV # _exptl.entry_id 1TPV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 171.046 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHOGLYCOLOHYDROXAMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1TPV _cell.length_a 136.1 _cell.length_b 74.1 _cell.length_c 57.3 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TPV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C2 H6 N O6 P' _chem_comp.formula_weight 171.046 _chem_comp.id PGH _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHOGLYCOLOHYDROXAMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PGH sing 237 n n C1 N2 PGH sing 238 n n C1 O1 PGH doub 239 n n C2 O1P PGH sing 240 n n C2 H21 PGH sing 241 n n C2 H22 PGH sing 242 n n N2 O2 PGH sing 243 n n N2 HN PGH sing 244 n n O2 HO2 PGH sing 245 n n O1P P PGH sing 246 n n O2P P PGH doub 247 n n O3P P PGH sing 248 n n O3P HOP3 PGH sing 249 n n O4P P PGH sing 250 n n O4P HOP4 PGH sing 251 n n # _atom_sites.entry_id 1TPV _atom_sites.fract_transf_matrix[1][1] 0.007348 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013495 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017452 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGH A 1 250 250 PGH PGH . D 2 PGH B 1 250 250 PGH PGH . E 3 HOH A 1 601 601 HOH HOH . E 3 HOH A 2 602 602 HOH HOH . E 3 HOH A 3 604 604 HOH HOH . E 3 HOH A 4 605 605 HOH HOH . E 3 HOH A 5 606 606 HOH HOH . E 3 HOH A 6 607 607 HOH HOH . E 3 HOH A 7 608 608 HOH HOH . E 3 HOH A 8 609 609 HOH HOH . E 3 HOH A 9 610 610 HOH HOH . E 3 HOH A 10 611 611 HOH HOH . E 3 HOH A 11 612 612 HOH HOH . E 3 HOH A 12 613 613 HOH HOH . E 3 HOH A 13 614 614 HOH HOH . E 3 HOH A 14 615 615 HOH HOH . E 3 HOH A 15 616 616 HOH HOH . E 3 HOH A 16 620 620 HOH HOH . E 3 HOH A 17 621 621 HOH HOH . E 3 HOH A 18 622 622 HOH HOH . E 3 HOH A 19 626 626 HOH HOH . E 3 HOH A 20 627 627 HOH HOH . E 3 HOH A 21 628 628 HOH HOH . E 3 HOH A 22 629 629 HOH HOH . E 3 HOH A 23 633 633 HOH HOH . E 3 HOH A 24 634 634 HOH HOH . E 3 HOH A 25 635 635 HOH HOH . E 3 HOH A 26 636 636 HOH HOH . E 3 HOH A 27 637 637 HOH HOH . E 3 HOH A 28 640 640 HOH HOH . E 3 HOH A 29 642 642 HOH HOH . E 3 HOH A 30 644 644 HOH HOH . E 3 HOH A 31 648 648 HOH HOH . E 3 HOH A 32 649 649 HOH HOH . E 3 HOH A 33 650 650 HOH HOH . E 3 HOH A 34 653 653 HOH HOH . E 3 HOH A 35 662 662 HOH HOH . E 3 HOH A 36 663 663 HOH HOH . E 3 HOH A 37 664 664 HOH HOH . E 3 HOH A 38 665 665 HOH HOH . E 3 HOH A 39 666 666 HOH HOH . E 3 HOH A 40 672 672 HOH HOH . E 3 HOH A 41 673 673 HOH HOH . E 3 HOH A 42 674 674 HOH HOH . E 3 HOH A 43 678 678 HOH HOH . E 3 HOH A 44 679 679 HOH HOH . E 3 HOH A 45 680 680 HOH HOH . E 3 HOH A 46 681 681 HOH HOH . E 3 HOH A 47 682 682 HOH HOH . E 3 HOH A 48 687 687 HOH HOH . E 3 HOH A 49 688 688 HOH HOH . E 3 HOH A 50 689 689 HOH HOH . E 3 HOH A 51 691 691 HOH HOH . E 3 HOH A 52 692 692 HOH HOH . E 3 HOH A 53 693 693 HOH HOH . E 3 HOH A 54 696 696 HOH HOH . E 3 HOH A 55 697 697 HOH HOH . E 3 HOH A 56 698 698 HOH HOH . E 3 HOH A 57 700 700 HOH HOH . E 3 HOH A 58 703 703 HOH HOH . E 3 HOH A 59 704 704 HOH HOH . E 3 HOH A 60 706 706 HOH HOH . E 3 HOH A 61 708 708 HOH HOH . E 3 HOH A 62 709 709 HOH HOH . E 3 HOH A 63 712 712 HOH HOH . E 3 HOH A 64 715 715 HOH HOH . E 3 HOH A 65 718 718 HOH HOH . E 3 HOH A 66 719 719 HOH HOH . E 3 HOH A 67 721 721 HOH HOH . E 3 HOH A 68 722 722 HOH HOH . E 3 HOH A 69 725 725 HOH HOH . E 3 HOH A 70 728 728 HOH HOH . E 3 HOH A 71 735 735 HOH HOH . E 3 HOH A 72 738 738 HOH HOH . E 3 HOH A 73 739 739 HOH HOH . E 3 HOH A 74 742 742 HOH HOH . E 3 HOH A 75 743 743 HOH HOH . E 3 HOH A 76 744 744 HOH HOH . E 3 HOH A 77 745 745 HOH HOH . E 3 HOH A 78 749 749 HOH HOH . E 3 HOH A 79 751 751 HOH HOH . E 3 HOH A 80 753 753 HOH HOH . E 3 HOH A 81 754 754 HOH HOH . E 3 HOH A 82 755 755 HOH HOH . E 3 HOH A 83 759 759 HOH HOH . E 3 HOH A 84 761 761 HOH HOH . E 3 HOH A 85 769 769 HOH HOH . E 3 HOH A 86 770 770 HOH HOH . E 3 HOH A 87 773 773 HOH HOH . E 3 HOH A 88 774 774 HOH HOH . E 3 HOH A 89 777 777 HOH HOH . E 3 HOH A 90 779 779 HOH HOH . E 3 HOH A 91 785 785 HOH HOH . E 3 HOH A 92 787 787 HOH HOH . E 3 HOH A 93 791 791 HOH HOH . E 3 HOH A 94 793 793 HOH HOH . E 3 HOH A 95 799 799 HOH HOH . E 3 HOH A 96 803 803 HOH HOH . E 3 HOH A 97 804 804 HOH HOH . E 3 HOH A 98 805 805 HOH HOH . E 3 HOH A 99 806 806 HOH HOH . E 3 HOH A 100 808 808 HOH HOH . E 3 HOH A 101 811 811 HOH HOH . E 3 HOH A 102 814 814 HOH HOH . E 3 HOH A 103 821 821 HOH HOH . E 3 HOH A 104 823 823 HOH HOH . E 3 HOH A 105 824 824 HOH HOH . E 3 HOH A 106 825 825 HOH HOH . E 3 HOH A 107 827 827 HOH HOH . E 3 HOH A 108 829 829 HOH HOH . E 3 HOH A 109 832 832 HOH HOH . E 3 HOH A 110 837 837 HOH HOH . E 3 HOH A 111 838 838 HOH HOH . E 3 HOH A 112 843 843 HOH HOH . E 3 HOH A 113 844 844 HOH HOH . E 3 HOH A 114 850 850 HOH HOH . E 3 HOH A 115 851 851 HOH HOH . E 3 HOH A 116 855 855 HOH HOH . E 3 HOH A 117 858 858 HOH HOH . E 3 HOH A 118 860 860 HOH HOH . E 3 HOH A 119 867 867 HOH HOH . E 3 HOH A 120 873 873 HOH HOH . E 3 HOH A 121 874 874 HOH HOH . F 3 HOH B 1 603 603 HOH HOH . F 3 HOH B 2 617 617 HOH HOH . F 3 HOH B 3 618 618 HOH HOH . F 3 HOH B 4 623 623 HOH HOH . F 3 HOH B 5 624 624 HOH HOH . F 3 HOH B 6 625 625 HOH HOH . F 3 HOH B 7 630 630 HOH HOH . F 3 HOH B 8 631 631 HOH HOH . F 3 HOH B 9 632 632 HOH HOH . F 3 HOH B 10 638 638 HOH HOH . F 3 HOH B 11 639 639 HOH HOH . F 3 HOH B 12 641 641 HOH HOH . F 3 HOH B 13 643 643 HOH HOH . F 3 HOH B 14 645 645 HOH HOH . F 3 HOH B 15 646 646 HOH HOH . F 3 HOH B 16 647 647 HOH HOH . F 3 HOH B 17 651 651 HOH HOH . F 3 HOH B 18 652 652 HOH HOH . F 3 HOH B 19 655 655 HOH HOH . F 3 HOH B 20 656 656 HOH HOH . F 3 HOH B 21 657 657 HOH HOH . F 3 HOH B 22 658 658 HOH HOH . F 3 HOH B 23 659 659 HOH HOH . F 3 HOH B 24 661 661 HOH HOH . F 3 HOH B 25 667 667 HOH HOH . F 3 HOH B 26 668 668 HOH HOH . F 3 HOH B 27 669 669 HOH HOH . F 3 HOH B 28 670 670 HOH HOH . F 3 HOH B 29 671 671 HOH HOH . F 3 HOH B 30 676 676 HOH HOH . F 3 HOH B 31 677 677 HOH HOH . F 3 HOH B 32 683 683 HOH HOH . F 3 HOH B 33 684 684 HOH HOH . F 3 HOH B 34 686 686 HOH HOH . F 3 HOH B 35 690 690 HOH HOH . F 3 HOH B 36 694 694 HOH HOH . F 3 HOH B 37 695 695 HOH HOH . F 3 HOH B 38 699 699 HOH HOH . F 3 HOH B 39 701 701 HOH HOH . F 3 HOH B 40 702 702 HOH HOH . F 3 HOH B 41 705 705 HOH HOH . F 3 HOH B 42 707 707 HOH HOH . F 3 HOH B 43 710 710 HOH HOH . F 3 HOH B 44 711 711 HOH HOH . F 3 HOH B 45 713 713 HOH HOH . F 3 HOH B 46 716 716 HOH HOH . F 3 HOH B 47 717 717 HOH HOH . F 3 HOH B 48 720 720 HOH HOH . F 3 HOH B 49 723 723 HOH HOH . F 3 HOH B 50 724 724 HOH HOH . F 3 HOH B 51 726 726 HOH HOH . F 3 HOH B 52 727 727 HOH HOH . F 3 HOH B 53 729 729 HOH HOH . F 3 HOH B 54 730 730 HOH HOH . F 3 HOH B 55 731 731 HOH HOH . F 3 HOH B 56 732 732 HOH HOH . F 3 HOH B 57 733 733 HOH HOH . F 3 HOH B 58 734 734 HOH HOH . F 3 HOH B 59 736 736 HOH HOH . F 3 HOH B 60 737 737 HOH HOH . F 3 HOH B 61 746 746 HOH HOH . F 3 HOH B 62 747 747 HOH HOH . F 3 HOH B 63 748 748 HOH HOH . F 3 HOH B 64 752 752 HOH HOH . F 3 HOH B 65 756 756 HOH HOH . F 3 HOH B 66 757 757 HOH HOH . F 3 HOH B 67 758 758 HOH HOH . F 3 HOH B 68 760 760 HOH HOH . F 3 HOH B 69 763 763 HOH HOH . F 3 HOH B 70 764 764 HOH HOH . F 3 HOH B 71 765 765 HOH HOH . F 3 HOH B 72 766 766 HOH HOH . F 3 HOH B 73 767 767 HOH HOH . F 3 HOH B 74 768 768 HOH HOH . F 3 HOH B 75 771 771 HOH HOH . F 3 HOH B 76 772 772 HOH HOH . F 3 HOH B 77 775 775 HOH HOH . F 3 HOH B 78 776 776 HOH HOH . F 3 HOH B 79 778 778 HOH HOH . F 3 HOH B 80 781 781 HOH HOH . F 3 HOH B 81 782 782 HOH HOH . F 3 HOH B 82 783 783 HOH HOH . F 3 HOH B 83 784 784 HOH HOH . F 3 HOH B 84 786 786 HOH HOH . F 3 HOH B 85 788 788 HOH HOH . F 3 HOH B 86 789 789 HOH HOH . F 3 HOH B 87 790 790 HOH HOH . F 3 HOH B 88 794 794 HOH HOH . F 3 HOH B 89 795 795 HOH HOH . F 3 HOH B 90 796 796 HOH HOH . F 3 HOH B 91 797 797 HOH HOH . F 3 HOH B 92 798 798 HOH HOH . F 3 HOH B 93 800 800 HOH HOH . F 3 HOH B 94 801 801 HOH HOH . F 3 HOH B 95 809 809 HOH HOH . F 3 HOH B 96 810 810 HOH HOH . F 3 HOH B 97 812 812 HOH HOH . F 3 HOH B 98 813 813 HOH HOH . F 3 HOH B 99 815 815 HOH HOH . F 3 HOH B 100 817 817 HOH HOH . F 3 HOH B 101 820 820 HOH HOH . F 3 HOH B 102 822 822 HOH HOH . F 3 HOH B 103 826 826 HOH HOH . F 3 HOH B 104 828 828 HOH HOH . F 3 HOH B 105 830 830 HOH HOH . F 3 HOH B 106 831 831 HOH HOH . F 3 HOH B 107 834 834 HOH HOH . F 3 HOH B 108 835 835 HOH HOH . F 3 HOH B 109 836 836 HOH HOH . F 3 HOH B 110 840 840 HOH HOH . F 3 HOH B 111 841 841 HOH HOH . F 3 HOH B 112 847 847 HOH HOH . F 3 HOH B 113 848 848 HOH HOH . F 3 HOH B 114 852 852 HOH HOH . F 3 HOH B 115 853 853 HOH HOH . F 3 HOH B 116 854 854 HOH HOH . F 3 HOH B 117 857 857 HOH HOH . F 3 HOH B 118 859 859 HOH HOH . F 3 HOH B 119 861 861 HOH HOH . F 3 HOH B 120 862 862 HOH HOH . F 3 HOH B 121 863 863 HOH HOH . F 3 HOH B 122 864 864 HOH HOH . F 3 HOH B 123 866 866 HOH HOH . F 3 HOH B 124 868 868 HOH HOH . F 3 HOH B 125 869 869 HOH HOH . F 3 HOH B 126 870 870 HOH HOH . F 3 HOH B 127 871 871 HOH HOH . F 3 HOH B 128 872 872 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGH . . . C 2 23.472 30.042 20.031 1 60.07 ? C1 PGH 250 A 1 HETATM 2 C C2 PGH . . . C 2 24.738 30.9 20.31 1 51.58 ? C2 PGH 250 A 1 HETATM 3 N N2 PGH . . . C 2 22.917 30.276 18.825 1 60.41 ? N2 PGH 250 A 1 HETATM 4 O O2 PGH . . . C 2 21.656 29.702 18.561 1 53.2 ? O2 PGH 250 A 1 HETATM 5 O O1 PGH . . . C 2 23.033 29.198 20.844 1 62.91 ? O1 PGH 250 A 1 HETATM 6 O O1P PGH . . . C 2 24.553 31.958 21.28 1 43.86 ? O1P PGH 250 A 1 HETATM 7 O O2P PGH . . . C 2 25.359 34.076 22.458 1 33.52 ? O2P PGH 250 A 1 HETATM 8 O O3P PGH . . . C 2 26.274 33.366 20.265 1 24.34 ? O3P PGH 250 A 1 HETATM 9 O O4P PGH . . . C 2 26.862 32.109 22.334 1 37.41 ? O4P PGH 250 A 1 HETATM 10 P P PGH . . . C 2 25.809 32.87 21.62 1 30.07 ? P PGH 250 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 223 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #