data_1TQ2
#
_model_server_result.job_id            Tg6Ec59B9MnQ4lNDPs48XQ 
_model_server_result.datetime_utc      '2025-02-05 19:08:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1tq2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":500}' 
#
_entry.id    1TQ2 
#
_exptl.entry_id    1TQ2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              522.196 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1TQ2 
_cell.length_a            81.86 
_cell.length_b            92.67 
_cell.length_c            142.4 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1TQ2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,G 1 1 
B,D,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B OG SER 83 B SER 83 1_555 D MG MG . B MG 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? 
metalc ? metalc2 E O2G GNP . B GNP 1500 1_555 D MG MG . B MG 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? 
metalc ? metalc3 E O2B GNP . B GNP 1500 1_555 D MG MG . B MG 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? 
#
_chem_comp.formula           'C10 H17 N6 O13 P3' 
_chem_comp.formula_weight    522.196 
_chem_comp.id                GNP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GNP doub 129 n n 
PG O2G GNP sing 130 n n 
PG O3G GNP sing 131 n n 
PG N3B GNP sing 132 n n 
O2G HOG2 GNP sing 133 n n 
O3G HOG3 GNP sing 134 n n 
N3B PB GNP sing 135 n n 
N3B HNB3 GNP sing 136 n n 
PB O1B GNP doub 137 n n 
PB O2B GNP sing 138 n n 
PB O3A GNP sing 139 n n 
O2B HOB2 GNP sing 140 n n 
O3A PA GNP sing 141 n n 
PA O1A GNP doub 142 n n 
PA O2A GNP sing 143 n n 
PA O5' GNP sing 144 n n 
O2A HOA2 GNP sing 145 n n 
O5' C5' GNP sing 146 n n 
C5' C4' GNP sing 147 n n 
C5' "H5'2" GNP sing 148 n n 
C5' "H5'1" GNP sing 149 n n 
C4' O4' GNP sing 150 n n 
C4' C3' GNP sing 151 n n 
C4' H4' GNP sing 152 n n 
O4' C1' GNP sing 153 n n 
C3' O3' GNP sing 154 n n 
C3' C2' GNP sing 155 n n 
C3' H3' GNP sing 156 n n 
O3' HO3' GNP sing 157 n n 
C2' O2' GNP sing 158 n n 
C2' C1' GNP sing 159 n n 
C2' H2' GNP sing 160 n n 
O2' HO2' GNP sing 161 n n 
C1' N9 GNP sing 162 n n 
C1' H1' GNP sing 163 n n 
N9 C8 GNP sing 164 n y 
N9 C4 GNP sing 165 n y 
C8 N7 GNP doub 166 n y 
C8 H8 GNP sing 167 n n 
N7 C5 GNP sing 168 n y 
C5 C6 GNP sing 169 n y 
C5 C4 GNP doub 170 n y 
C6 O6 GNP doub 171 n n 
C6 N1 GNP sing 172 n y 
N1 C2 GNP sing 173 n y 
N1 HN1 GNP sing 174 n n 
C2 N2 GNP sing 175 n n 
C2 N3 GNP doub 176 n y 
N2 HN21 GNP sing 177 n n 
N2 HN22 GNP sing 178 n n 
N3 C4 GNP sing 179 n y 
#
_atom_sites.entry_id                     1TQ2 
_atom_sites.fract_transf_matrix[1][1]    0.012216 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010791 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007022 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GNP A 1 500 500 GNP GNP . 
D 3 MG B 1 1501 501 MG MG2 . 
E 2 GNP B 1 1500 500 GNP GNP . 
F 4 MPD B 1 1000 1000 MPD MPD . 
G 5 HOH A 1 501 1 HOH HOH . 
G 5 HOH A 2 502 7 HOH HOH . 
G 5 HOH A 3 503 8 HOH HOH . 
G 5 HOH A 4 504 9 HOH HOH . 
G 5 HOH A 5 505 10 HOH HOH . 
G 5 HOH A 6 506 11 HOH HOH . 
G 5 HOH A 7 507 12 HOH HOH . 
G 5 HOH A 8 508 13 HOH HOH . 
G 5 HOH A 9 509 14 HOH HOH . 
G 5 HOH A 10 510 15 HOH HOH . 
G 5 HOH A 11 511 20 HOH HOH . 
G 5 HOH A 12 512 23 HOH HOH . 
G 5 HOH A 13 513 25 HOH HOH . 
G 5 HOH A 14 514 26 HOH HOH . 
G 5 HOH A 15 515 30 HOH HOH . 
G 5 HOH A 16 516 35 HOH HOH . 
G 5 HOH A 17 517 36 HOH HOH . 
G 5 HOH A 18 518 38 HOH HOH . 
G 5 HOH A 19 519 48 HOH HOH . 
G 5 HOH A 20 520 49 HOH HOH . 
G 5 HOH A 21 521 50 HOH HOH . 
G 5 HOH A 22 522 52 HOH HOH . 
G 5 HOH A 23 523 54 HOH HOH . 
G 5 HOH A 24 524 55 HOH HOH . 
G 5 HOH A 25 525 56 HOH HOH . 
G 5 HOH A 26 526 63 HOH HOH . 
G 5 HOH A 27 527 64 HOH HOH . 
G 5 HOH A 28 528 66 HOH HOH . 
G 5 HOH A 29 529 67 HOH HOH . 
G 5 HOH A 30 530 70 HOH HOH . 
G 5 HOH A 31 531 71 HOH HOH . 
G 5 HOH A 32 532 72 HOH HOH . 
G 5 HOH A 33 533 74 HOH HOH . 
G 5 HOH A 34 534 80 HOH HOH . 
G 5 HOH A 35 535 84 HOH HOH . 
G 5 HOH A 36 536 86 HOH HOH . 
G 5 HOH A 37 537 87 HOH HOH . 
G 5 HOH A 38 538 88 HOH HOH . 
G 5 HOH A 39 539 89 HOH HOH . 
G 5 HOH A 40 540 90 HOH HOH . 
G 5 HOH A 41 541 92 HOH HOH . 
G 5 HOH A 42 542 94 HOH HOH . 
G 5 HOH A 43 543 95 HOH HOH . 
G 5 HOH A 44 544 96 HOH HOH . 
G 5 HOH A 45 545 100 HOH HOH . 
G 5 HOH A 46 546 102 HOH HOH . 
G 5 HOH A 47 547 103 HOH HOH . 
G 5 HOH A 48 548 108 HOH HOH . 
G 5 HOH A 49 549 112 HOH HOH . 
G 5 HOH A 50 550 114 HOH HOH . 
H 5 HOH B 1 1502 2 HOH HOH . 
H 5 HOH B 2 1503 3 HOH HOH . 
H 5 HOH B 3 1504 4 HOH HOH . 
H 5 HOH B 4 1505 5 HOH HOH . 
H 5 HOH B 5 1506 6 HOH HOH . 
H 5 HOH B 6 1507 16 HOH HOH . 
H 5 HOH B 7 1508 17 HOH HOH . 
H 5 HOH B 8 1509 18 HOH HOH . 
H 5 HOH B 9 1510 19 HOH HOH . 
H 5 HOH B 10 1511 21 HOH HOH . 
H 5 HOH B 11 1512 22 HOH HOH . 
H 5 HOH B 12 1513 24 HOH HOH . 
H 5 HOH B 13 1514 27 HOH HOH . 
H 5 HOH B 14 1515 28 HOH HOH . 
H 5 HOH B 15 1516 29 HOH HOH . 
H 5 HOH B 16 1517 31 HOH HOH . 
H 5 HOH B 17 1518 32 HOH HOH . 
H 5 HOH B 18 1519 33 HOH HOH . 
H 5 HOH B 19 1520 34 HOH HOH . 
H 5 HOH B 20 1521 37 HOH HOH . 
H 5 HOH B 21 1522 39 HOH HOH . 
H 5 HOH B 22 1523 40 HOH HOH . 
H 5 HOH B 23 1524 41 HOH HOH . 
H 5 HOH B 24 1525 42 HOH HOH . 
H 5 HOH B 25 1526 43 HOH HOH . 
H 5 HOH B 26 1527 44 HOH HOH . 
H 5 HOH B 27 1528 45 HOH HOH . 
H 5 HOH B 28 1529 46 HOH HOH . 
H 5 HOH B 29 1530 47 HOH HOH . 
H 5 HOH B 30 1531 51 HOH HOH . 
H 5 HOH B 31 1532 53 HOH HOH . 
H 5 HOH B 32 1533 57 HOH HOH . 
H 5 HOH B 33 1534 58 HOH HOH . 
H 5 HOH B 34 1535 59 HOH HOH . 
H 5 HOH B 35 1536 60 HOH HOH . 
H 5 HOH B 36 1537 61 HOH HOH . 
H 5 HOH B 37 1538 62 HOH HOH . 
H 5 HOH B 38 1539 65 HOH HOH . 
H 5 HOH B 39 1540 68 HOH HOH . 
H 5 HOH B 40 1541 69 HOH HOH . 
H 5 HOH B 41 1542 73 HOH HOH . 
H 5 HOH B 42 1543 75 HOH HOH . 
H 5 HOH B 43 1544 76 HOH HOH . 
H 5 HOH B 44 1545 77 HOH HOH . 
H 5 HOH B 45 1546 78 HOH HOH . 
H 5 HOH B 46 1547 79 HOH HOH . 
H 5 HOH B 47 1548 81 HOH HOH . 
H 5 HOH B 48 1549 82 HOH HOH . 
H 5 HOH B 49 1550 83 HOH HOH . 
H 5 HOH B 50 1551 85 HOH HOH . 
H 5 HOH B 51 1552 91 HOH HOH . 
H 5 HOH B 52 1553 93 HOH HOH . 
H 5 HOH B 53 1554 97 HOH HOH . 
H 5 HOH B 54 1555 98 HOH HOH . 
H 5 HOH B 55 1556 99 HOH HOH . 
H 5 HOH B 56 1557 101 HOH HOH . 
H 5 HOH B 57 1558 104 HOH HOH . 
H 5 HOH B 58 1559 105 HOH HOH . 
H 5 HOH B 59 1560 106 HOH HOH . 
H 5 HOH B 60 1561 107 HOH HOH . 
H 5 HOH B 61 1562 109 HOH HOH . 
H 5 HOH B 62 1563 110 HOH HOH . 
H 5 HOH B 63 1564 111 HOH HOH . 
H 5 HOH B 64 1565 113 HOH HOH . 
H 5 HOH B 65 1566 115 HOH HOH . 
H 5 HOH B 66 1567 116 HOH HOH . 
H 5 HOH B 67 1568 117 HOH HOH . 
H 5 HOH B 68 1569 118 HOH HOH . 
H 5 HOH B 69 1570 119 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GNP . . . C 2 5.517 2.334 30.696 0.8 115.1 ? PG GNP 500 A 1 
HETATM 2 O O1G GNP . . . C 2 5.935 2.07 32.21 0.8 114.83 ? O1G GNP 500 A 1 
HETATM 3 O O2G GNP . . . C 2 6.734 2.322 29.934 0.8 115.16 ? O2G GNP 500 A 1 
HETATM 4 O O3G GNP . . . C 2 4.531 1.17 30.341 0.8 114.64 ? O3G GNP 500 A 1 
HETATM 5 N N3B GNP . . . C 2 4.698 3.729 30.727 0.8 113.8 ? N3B GNP 500 A 1 
HETATM 6 P PB GNP . . . C 2 5.607 5.2 31.103 0.8 113 ? PB GNP 500 A 1 
HETATM 7 O O1B GNP . . . C 2 6.102 5.182 32.507 0.8 113.39 ? O1B GNP 500 A 1 
HETATM 8 O O2B GNP . . . C 2 6.652 5.314 30.287 0.8 112.71 ? O2B GNP 500 A 1 
HETATM 9 O O3A GNP . . . C 2 4.726 6.48 31.119 0.8 112.31 ? O3A GNP 500 A 1 
HETATM 10 P PA GNP . . . C 2 4.082 7.373 29.817 0.8 111.8 ? PA GNP 500 A 1 
HETATM 11 O O1A GNP . . . C 2 5.093 8.43 29.518 0.8 111 ? O1A GNP 500 A 1 
HETATM 12 O O2A GNP . . . C 2 3.752 6.253 28.82 0.8 111.46 ? O2A GNP 500 A 1 
HETATM 13 O O5' GNP . . . C 2 2.756 7.942 30.395 0.8 110.82 ? O5' GNP 500 A 1 
HETATM 14 C C5' GNP . . . C 2 1.487 7.379 29.951 0.8 109.97 ? C5' GNP 500 A 1 
HETATM 15 C C4' GNP . . . C 2 0.553 8.357 29.419 0.8 109.82 ? C4' GNP 500 A 1 
HETATM 16 O O4' GNP . . . C 2 0.383 9.45 30.439 0.8 109.65 ? O4' GNP 500 A 1 
HETATM 17 C C3' GNP . . . C 2 0.901 9.218 28.144 0.8 109.84 ? C3' GNP 500 A 1 
HETATM 18 O O3' GNP . . . C 2 -0.534 9.338 27.599 0.8 109.39 ? O3' GNP 500 A 1 
HETATM 19 C C2' GNP . . . C 2 1.248 10.709 28.558 0.8 109.91 ? C2' GNP 500 A 1 
HETATM 20 O O2' GNP . . . C 2 0.576 11.685 27.662 0.8 110.61 ? O2' GNP 500 A 1 
HETATM 21 C C1' GNP . . . C 2 0.574 10.843 29.978 0.8 109.66 ? C1' GNP 500 A 1 
HETATM 22 N N9 GNP . . . C 2 1.45 11.575 30.969 0.8 109.65 ? N9 GNP 500 A 1 
HETATM 23 C C8 GNP . . . C 2 2.798 11.018 31.256 0.8 109.74 ? C8 GNP 500 A 1 
HETATM 24 N N7 GNP . . . C 2 3.056 12.045 32.151 0.8 109.38 ? N7 GNP 500 A 1 
HETATM 25 C C5 GNP . . . C 2 2.208 13.032 32.441 0.8 109.41 ? C5 GNP 500 A 1 
HETATM 26 C C6 GNP . . . C 2 1.92 14.206 33.166 0.8 109.47 ? C6 GNP 500 A 1 
HETATM 27 O O6 GNP . . . C 2 2.939 14.579 33.975 0.8 109.02 ? O6 GNP 500 A 1 
HETATM 28 N N1 GNP . . . C 2 0.78 14.941 33.117 0.8 109.79 ? N1 GNP 500 A 1 
HETATM 29 C C2 GNP . . . C 2 -0.298 14.442 32.184 0.8 109.34 ? C2 GNP 500 A 1 
HETATM 30 N N2 GNP . . . C 2 -1.337 15.182 32.19 0.8 109.48 ? N2 GNP 500 A 1 
HETATM 31 N N3 GNP . . . C 2 -0.07 13.393 31.524 0.8 109.16 ? N3 GNP 500 A 1 
HETATM 32 C C4 GNP . . . C 2 1.061 12.7 31.599 0.8 109.56 ? C4 GNP 500 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           259 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           32 
#