data_1TR7
#
_model_server_result.job_id            '_GVzw7W_-5qadeigkDLyFw' 
_model_server_result.datetime_utc      '2024-11-05 23:28:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1tr7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":2692}' 
#
_entry.id    1TR7 
#
_exptl.entry_id    1TR7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.2 
_cell.angle_gamma         90 
_cell.entry_id            1TR7 
_cell.length_a            134.1 
_cell.length_b            29.2 
_cell.length_c            93.3 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1TR7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,G 1 1 
B,D,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 264 n n 
C1 H11 MPD sing 265 n n 
C1 H12 MPD sing 266 n n 
C1 H13 MPD sing 267 n n 
C2 O2 MPD sing 268 n n 
C2 CM MPD sing 269 n n 
C2 C3 MPD sing 270 n n 
O2 HO2 MPD sing 271 n n 
CM HM1 MPD sing 272 n n 
CM HM2 MPD sing 273 n n 
CM HM3 MPD sing 274 n n 
C3 C4 MPD sing 275 n n 
C3 H31 MPD sing 276 n n 
C3 H32 MPD sing 277 n n 
C4 O4 MPD sing 278 n n 
C4 C5 MPD sing 279 n n 
C4 H4 MPD sing 280 n n 
O4 HO4 MPD sing 281 n n 
C5 H51 MPD sing 282 n n 
C5 H52 MPD sing 283 n n 
C5 H53 MPD sing 284 n n 
#
_atom_sites.entry_id                     1TR7 
_atom_sites.fract_transf_matrix[1][1]    0.007454 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000291 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.034211 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010721 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 DEG B 1 502 2 DEG DEG . 
D 3 CAC A 1 1200 1200 CAC CAC . 
E 2 DEG A 1 501 1 DEG DEG . 
F 4 MPD A 1 2692 2692 MPD MPD . 
G 5 HOH B 1 503 5 HOH WAT . 
G 5 HOH B 2 504 7 HOH WAT . 
G 5 HOH B 3 505 8 HOH WAT . 
G 5 HOH B 4 506 9 HOH WAT . 
G 5 HOH B 5 507 11 HOH WAT . 
G 5 HOH B 6 508 12 HOH WAT . 
G 5 HOH B 7 509 13 HOH WAT . 
G 5 HOH B 8 510 15 HOH WAT . 
G 5 HOH B 9 511 23 HOH WAT . 
G 5 HOH B 10 512 25 HOH WAT . 
G 5 HOH B 11 513 30 HOH WAT . 
G 5 HOH B 12 514 33 HOH WAT . 
G 5 HOH B 13 515 34 HOH WAT . 
G 5 HOH B 14 516 37 HOH WAT . 
G 5 HOH B 15 517 38 HOH WAT . 
G 5 HOH B 16 518 39 HOH WAT . 
G 5 HOH B 17 519 45 HOH WAT . 
G 5 HOH B 18 520 47 HOH WAT . 
G 5 HOH B 19 521 51 HOH WAT . 
G 5 HOH B 20 522 52 HOH WAT . 
G 5 HOH B 21 523 53 HOH WAT . 
G 5 HOH B 22 524 59 HOH WAT . 
G 5 HOH B 23 525 61 HOH WAT . 
G 5 HOH B 24 526 63 HOH WAT . 
G 5 HOH B 25 527 65 HOH WAT . 
G 5 HOH B 26 528 67 HOH WAT . 
G 5 HOH B 27 529 69 HOH WAT . 
G 5 HOH B 28 530 71 HOH WAT . 
G 5 HOH B 29 531 72 HOH WAT . 
G 5 HOH B 30 532 73 HOH WAT . 
G 5 HOH B 31 533 76 HOH WAT . 
G 5 HOH B 32 534 79 HOH WAT . 
G 5 HOH B 33 535 83 HOH WAT . 
G 5 HOH B 34 536 89 HOH WAT . 
G 5 HOH B 35 537 91 HOH WAT . 
G 5 HOH B 36 538 93 HOH WAT . 
G 5 HOH B 37 539 94 HOH WAT . 
G 5 HOH B 38 540 96 HOH WAT . 
G 5 HOH B 39 541 97 HOH WAT . 
G 5 HOH B 40 542 98 HOH WAT . 
G 5 HOH B 41 543 102 HOH WAT . 
G 5 HOH B 42 544 103 HOH WAT . 
G 5 HOH B 43 545 105 HOH WAT . 
G 5 HOH B 44 546 107 HOH WAT . 
G 5 HOH B 45 547 108 HOH WAT . 
G 5 HOH B 46 548 109 HOH WAT . 
G 5 HOH B 47 549 111 HOH WAT . 
G 5 HOH B 48 550 113 HOH WAT . 
G 5 HOH B 49 551 114 HOH WAT . 
G 5 HOH B 50 552 116 HOH WAT . 
G 5 HOH B 51 553 117 HOH WAT . 
G 5 HOH B 52 554 119 HOH WAT . 
G 5 HOH B 53 555 123 HOH WAT . 
G 5 HOH B 54 556 124 HOH WAT . 
G 5 HOH B 55 557 125 HOH WAT . 
G 5 HOH B 56 558 127 HOH WAT . 
G 5 HOH B 57 559 128 HOH WAT . 
G 5 HOH B 58 560 131 HOH WAT . 
G 5 HOH B 59 561 134 HOH WAT . 
G 5 HOH B 60 562 136 HOH WAT . 
G 5 HOH B 61 563 139 HOH WAT . 
G 5 HOH B 62 564 140 HOH WAT . 
G 5 HOH B 63 565 141 HOH WAT . 
G 5 HOH B 64 566 144 HOH WAT . 
G 5 HOH B 65 567 145 HOH WAT . 
G 5 HOH B 66 568 147 HOH WAT . 
G 5 HOH B 67 569 148 HOH WAT . 
G 5 HOH B 68 570 149 HOH WAT . 
G 5 HOH B 69 571 150 HOH WAT . 
H 5 HOH A 1 2693 1 HOH WAT . 
H 5 HOH A 2 2694 2 HOH WAT . 
H 5 HOH A 3 2695 3 HOH WAT . 
H 5 HOH A 4 2696 4 HOH WAT . 
H 5 HOH A 5 2697 6 HOH WAT . 
H 5 HOH A 6 2698 10 HOH WAT . 
H 5 HOH A 7 2699 14 HOH WAT . 
H 5 HOH A 8 2700 16 HOH WAT . 
H 5 HOH A 9 2701 17 HOH WAT . 
H 5 HOH A 10 2702 18 HOH WAT . 
H 5 HOH A 11 2703 19 HOH WAT . 
H 5 HOH A 12 2704 20 HOH WAT . 
H 5 HOH A 13 2705 21 HOH WAT . 
H 5 HOH A 14 2706 22 HOH WAT . 
H 5 HOH A 15 2707 24 HOH WAT . 
H 5 HOH A 16 2708 26 HOH WAT . 
H 5 HOH A 17 2709 27 HOH WAT . 
H 5 HOH A 18 2710 28 HOH WAT . 
H 5 HOH A 19 2711 29 HOH WAT . 
H 5 HOH A 20 2712 31 HOH WAT . 
H 5 HOH A 21 2713 32 HOH WAT . 
H 5 HOH A 22 2714 35 HOH WAT . 
H 5 HOH A 23 2715 36 HOH WAT . 
H 5 HOH A 24 2716 40 HOH WAT . 
H 5 HOH A 25 2717 41 HOH WAT . 
H 5 HOH A 26 2718 42 HOH WAT . 
H 5 HOH A 27 2719 43 HOH WAT . 
H 5 HOH A 28 2720 44 HOH WAT . 
H 5 HOH A 29 2721 46 HOH WAT . 
H 5 HOH A 30 2722 48 HOH WAT . 
H 5 HOH A 31 2723 49 HOH WAT . 
H 5 HOH A 32 2724 50 HOH WAT . 
H 5 HOH A 33 2725 54 HOH WAT . 
H 5 HOH A 34 2726 55 HOH WAT . 
H 5 HOH A 35 2727 56 HOH WAT . 
H 5 HOH A 36 2728 57 HOH WAT . 
H 5 HOH A 37 2729 58 HOH WAT . 
H 5 HOH A 38 2730 60 HOH WAT . 
H 5 HOH A 39 2731 62 HOH WAT . 
H 5 HOH A 40 2732 64 HOH WAT . 
H 5 HOH A 41 2733 68 HOH WAT . 
H 5 HOH A 42 2734 70 HOH WAT . 
H 5 HOH A 43 2735 74 HOH WAT . 
H 5 HOH A 44 2736 75 HOH WAT . 
H 5 HOH A 45 2737 77 HOH WAT . 
H 5 HOH A 46 2738 78 HOH WAT . 
H 5 HOH A 47 2739 80 HOH WAT . 
H 5 HOH A 48 2740 81 HOH WAT . 
H 5 HOH A 49 2741 82 HOH WAT . 
H 5 HOH A 50 2742 84 HOH WAT . 
H 5 HOH A 51 2743 86 HOH WAT . 
H 5 HOH A 52 2744 87 HOH WAT . 
H 5 HOH A 53 2745 88 HOH WAT . 
H 5 HOH A 54 2746 90 HOH WAT . 
H 5 HOH A 55 2747 92 HOH WAT . 
H 5 HOH A 56 2748 95 HOH WAT . 
H 5 HOH A 57 2749 99 HOH WAT . 
H 5 HOH A 58 2750 100 HOH WAT . 
H 5 HOH A 59 2751 101 HOH WAT . 
H 5 HOH A 60 2752 110 HOH WAT . 
H 5 HOH A 61 2753 112 HOH WAT . 
H 5 HOH A 62 2754 118 HOH WAT . 
H 5 HOH A 63 2755 120 HOH WAT . 
H 5 HOH A 64 2756 121 HOH WAT . 
H 5 HOH A 65 2757 122 HOH WAT . 
H 5 HOH A 66 2758 126 HOH WAT . 
H 5 HOH A 67 2759 129 HOH WAT . 
H 5 HOH A 68 2760 130 HOH WAT . 
H 5 HOH A 69 2761 132 HOH WAT . 
H 5 HOH A 70 2762 133 HOH WAT . 
H 5 HOH A 71 2763 135 HOH WAT . 
H 5 HOH A 72 2764 137 HOH WAT . 
H 5 HOH A 73 2765 138 HOH WAT . 
H 5 HOH A 74 2766 142 HOH WAT . 
H 5 HOH A 75 2767 143 HOH WAT . 
H 5 HOH A 76 2768 146 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . F 4 39.286 -10.949 46.05 0.75 37.86 ? C1 MPD 2692 A 1 
HETATM 2 C C2 MPD . . . F 4 39.344 -9.699 45.193 0.75 35.26 ? C2 MPD 2692 A 1 
HETATM 3 O O2 MPD . . . F 4 39.854 -8.656 46.021 0.75 32.69 ? O2 MPD 2692 A 1 
HETATM 4 C CM MPD . . . F 4 40.359 -9.907 44.094 0.75 34.8 ? CM MPD 2692 A 1 
HETATM 5 C C3 MPD . . . F 4 37.965 -9.331 44.662 0.75 36.06 ? C3 MPD 2692 A 1 
HETATM 6 C C4 MPD . . . F 4 36.846 -9.472 45.714 0.75 36.4 ? C4 MPD 2692 A 1 
HETATM 7 O O4 MPD . . . F 4 37.165 -8.721 46.873 0.75 36.6 ? O4 MPD 2692 A 1 
HETATM 8 C C5 MPD . . . F 4 35.508 -9.011 45.144 0.75 35.1 ? C5 MPD 2692 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           8 
#