data_1TRP # _model_server_result.job_id c-C9kPfaAjn4yTciePSW_g _model_server_result.datetime_utc '2024-11-25 17:37:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1trp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":306}' # _entry.id 1TRP # _exptl.entry_id 1TRP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.35 _cell.angle_gamma 90 _cell.entry_id 1TRP _cell.length_a 49.15 _cell.length_b 48.15 _cell.length_c 40.15 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TRP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 A CYS 2 1_555 A SG CYS 10 A CYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf2 A SG CYS 6 A CYS 6 1_555 A SG CYS 103 A CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? disulf ? disulf3 B SG CYS 2 B CYS 202 1_555 B SG CYS 10 B CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? disulf ? disulf4 B SG CYS 6 B CYS 206 1_555 B SG CYS 103 B CYS 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? metalc ? metalc1 A OD2 ASP 15 A ASP 15 1_555 C CA CA . A CA 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc2 A OD1 ASP 15 A ASP 15 1_555 C CA CA . A CA 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.798 ? metalc ? metalc3 C CA CA . A CA 106 1_555 G O HOH . A HOH 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc4 C CA CA . A CA 106 1_555 G O HOH . A HOH 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? metalc ? metalc5 C CA CA . A CA 106 1_555 G O HOH . A HOH 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc6 C CA CA . A CA 106 1_555 G O HOH . A HOH 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? metalc ? metalc7 B OD1 ASP 15 B ASP 215 1_555 E CA CA . B CA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc8 B OD2 ASP 15 B ASP 215 1_555 E CA CA . B CA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc9 E CA CA . B CA 306 1_555 H O HOH . B HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc10 E CA CA . B CA 306 1_555 H O HOH . B HOH 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc11 E CA CA . B CA 306 1_555 H O HOH . B HOH 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.934 ? metalc ? metalc12 E CA CA . B CA 306 1_555 H O HOH . B HOH 465 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.611 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1TRP _atom_sites.fract_transf_matrix[1][1] 0.020346 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000124 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020768 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024907 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 106 106 CA CA . D 3 2GP A 1 105 105 2GP 2GP . E 2 CA B 1 306 306 CA CA . F 3 2GP B 1 305 305 2GP 2GP . G 4 HOH A 1 401 401 HOH HOH . G 4 HOH A 2 402 402 HOH HOH . G 4 HOH A 3 404 404 HOH HOH . G 4 HOH A 4 405 405 HOH HOH . G 4 HOH A 5 406 406 HOH HOH . G 4 HOH A 6 407 407 HOH HOH . G 4 HOH A 7 408 408 HOH HOH . G 4 HOH A 8 412 412 HOH HOH . G 4 HOH A 9 416 416 HOH HOH . G 4 HOH A 10 417 417 HOH HOH . G 4 HOH A 11 418 418 HOH HOH . G 4 HOH A 12 419 419 HOH HOH . G 4 HOH A 13 422 422 HOH HOH . G 4 HOH A 14 423 423 HOH HOH . G 4 HOH A 15 424 424 HOH HOH . G 4 HOH A 16 425 425 HOH HOH . G 4 HOH A 17 428 428 HOH HOH . G 4 HOH A 18 430 430 HOH HOH . G 4 HOH A 19 431 431 HOH HOH . G 4 HOH A 20 432 432 HOH HOH . G 4 HOH A 21 436 436 HOH HOH . G 4 HOH A 22 437 437 HOH HOH . G 4 HOH A 23 438 438 HOH HOH . G 4 HOH A 24 440 440 HOH HOH . G 4 HOH A 25 441 441 HOH HOH . G 4 HOH A 26 442 442 HOH HOH . G 4 HOH A 27 443 443 HOH HOH . G 4 HOH A 28 446 446 HOH HOH . G 4 HOH A 29 447 447 HOH HOH . G 4 HOH A 30 449 449 HOH HOH . G 4 HOH A 31 450 450 HOH HOH . G 4 HOH A 32 451 451 HOH HOH . G 4 HOH A 33 452 452 HOH HOH . G 4 HOH A 34 453 453 HOH HOH . G 4 HOH A 35 456 456 HOH HOH . G 4 HOH A 36 457 457 HOH HOH . G 4 HOH A 37 459 459 HOH HOH . G 4 HOH A 38 460 460 HOH HOH . G 4 HOH A 39 461 461 HOH HOH . G 4 HOH A 40 462 462 HOH HOH . G 4 HOH A 41 466 466 HOH HOH . G 4 HOH A 42 467 467 HOH HOH . G 4 HOH A 43 469 469 HOH HOH . G 4 HOH A 44 470 470 HOH HOH . G 4 HOH A 45 471 471 HOH HOH . G 4 HOH A 46 472 472 HOH HOH . G 4 HOH A 47 473 473 HOH HOH . G 4 HOH A 48 475 475 HOH HOH . G 4 HOH A 49 476 476 HOH HOH . G 4 HOH A 50 478 478 HOH HOH . G 4 HOH A 51 480 480 HOH HOH . G 4 HOH A 52 484 484 HOH HOH . G 4 HOH A 53 488 488 HOH HOH . G 4 HOH A 54 489 489 HOH HOH . G 4 HOH A 55 490 490 HOH HOH . H 4 HOH B 1 403 403 HOH HOH . H 4 HOH B 2 409 409 HOH HOH . H 4 HOH B 3 410 410 HOH HOH . H 4 HOH B 4 411 411 HOH HOH . H 4 HOH B 5 413 413 HOH HOH . H 4 HOH B 6 414 414 HOH HOH . H 4 HOH B 7 415 415 HOH HOH . H 4 HOH B 8 420 420 HOH HOH . H 4 HOH B 9 421 421 HOH HOH . H 4 HOH B 10 426 426 HOH HOH . H 4 HOH B 11 427 427 HOH HOH . H 4 HOH B 12 429 429 HOH HOH . H 4 HOH B 13 433 433 HOH HOH . H 4 HOH B 14 434 434 HOH HOH . H 4 HOH B 15 435 435 HOH HOH . H 4 HOH B 16 439 439 HOH HOH . H 4 HOH B 17 444 444 HOH HOH . H 4 HOH B 18 445 445 HOH HOH . H 4 HOH B 19 448 448 HOH HOH . H 4 HOH B 20 454 454 HOH HOH . H 4 HOH B 21 455 455 HOH HOH . H 4 HOH B 22 458 458 HOH HOH . H 4 HOH B 23 463 463 HOH HOH . H 4 HOH B 24 464 464 HOH HOH . H 4 HOH B 25 465 465 HOH HOH . H 4 HOH B 26 468 468 HOH HOH . H 4 HOH B 27 474 474 HOH HOH . H 4 HOH B 28 477 477 HOH HOH . H 4 HOH B 29 479 479 HOH HOH . H 4 HOH B 30 481 481 HOH HOH . H 4 HOH B 31 482 482 HOH HOH . H 4 HOH B 32 483 483 HOH HOH . H 4 HOH B 33 485 485 HOH HOH . H 4 HOH B 34 486 486 HOH HOH . H 4 HOH B 35 487 487 HOH HOH . H 4 HOH B 36 491 491 HOH HOH . H 4 HOH B 37 492 492 HOH HOH . H 4 HOH B 38 493 493 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 12.651 _atom_site.Cartn_y 20.544 _atom_site.Cartn_z 36.936 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 40.03 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 306 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #